From ad6d50d019b2abd8b9abdd702bd75abb402a58b6 Mon Sep 17 00:00:00 2001 From: Philippe Audeoud Date: Thu, 28 Nov 2013 15:05:08 +0000 Subject: - Update to 1.28 Sponsored by: OBS --- biology/p5-Bio-MAGETAB/Makefile | 61 +--------------------------------------- biology/p5-Bio-MAGETAB/distinfo | 4 +-- biology/p5-Bio-MAGETAB/pkg-plist | 57 +++++++++++++++++++++++++++++++++++++ 3 files changed, 60 insertions(+), 62 deletions(-) (limited to 'biology') diff --git a/biology/p5-Bio-MAGETAB/Makefile b/biology/p5-Bio-MAGETAB/Makefile index 8b08469ad962..c2dd00950b05 100644 --- a/biology/p5-Bio-MAGETAB/Makefile +++ b/biology/p5-Bio-MAGETAB/Makefile @@ -2,7 +2,7 @@ # $FreeBSD$ PORTNAME= Bio-MAGETAB -PORTVERSION= 1.27 +PORTVERSION= 1.28 CATEGORIES= biology perl5 MASTER_SITES= CPAN PKGNAMEPREFIX= p5- @@ -29,65 +29,6 @@ TEST_DEPENDS= p5-Test-Exception>=0.26:${PORTSDIR}/devel/p5-Test-Exception USES= perl5 USE_PERL5= configure -MAN3= Bio::MAGETAB.3 \ - Bio::MAGETAB::ArrayDesign.3 \ - Bio::MAGETAB::Assay.3 \ - Bio::MAGETAB::BaseClass.3 \ - Bio::MAGETAB::Comment.3 \ - Bio::MAGETAB::CompositeElement.3 \ - Bio::MAGETAB::Contact.3 \ - Bio::MAGETAB::ControlledTerm.3 \ - Bio::MAGETAB::Data.3 \ - Bio::MAGETAB::DataAcquisition.3 \ - Bio::MAGETAB::DataFile.3 \ - Bio::MAGETAB::DataMatrix.3 \ - Bio::MAGETAB::DatabaseEntry.3 \ - Bio::MAGETAB::DesignElement.3 \ - Bio::MAGETAB::Edge.3 \ - Bio::MAGETAB::Event.3 \ - Bio::MAGETAB::Extract.3 \ - Bio::MAGETAB::Factor.3 \ - Bio::MAGETAB::FactorValue.3 \ - Bio::MAGETAB::Feature.3 \ - Bio::MAGETAB::Investigation.3 \ - Bio::MAGETAB::LabeledExtract.3 \ - Bio::MAGETAB::Material.3 \ - Bio::MAGETAB::MatrixColumn.3 \ - Bio::MAGETAB::MatrixRow.3 \ - Bio::MAGETAB::Measurement.3 \ - Bio::MAGETAB::Node.3 \ - Bio::MAGETAB::Normalization.3 \ - Bio::MAGETAB::ParameterValue.3 \ - Bio::MAGETAB::Protocol.3 \ - Bio::MAGETAB::ProtocolApplication.3 \ - Bio::MAGETAB::ProtocolParameter.3 \ - Bio::MAGETAB::Publication.3 \ - Bio::MAGETAB::Reporter.3 \ - Bio::MAGETAB::SDRF.3 \ - Bio::MAGETAB::SDRFRow.3 \ - Bio::MAGETAB::Sample.3 \ - Bio::MAGETAB::Source.3 \ - Bio::MAGETAB::TermSource.3 \ - Bio::MAGETAB::Types.3 \ - Bio::MAGETAB::Util::Builder.3 \ - Bio::MAGETAB::Util::DBLoader.3 \ - Bio::MAGETAB::Util::Persistence.3 \ - Bio::MAGETAB::Util::Reader.3 \ - Bio::MAGETAB::Util::Reader::ADF.3 \ - Bio::MAGETAB::Util::Reader::DataMatrix.3 \ - Bio::MAGETAB::Util::Reader::IDF.3 \ - Bio::MAGETAB::Util::Reader::SDRF.3 \ - Bio::MAGETAB::Util::Reader::Tabfile.3 \ - Bio::MAGETAB::Util::Reader::TagValueFile.3 \ - Bio::MAGETAB::Util::RewriteAE.3 \ - Bio::MAGETAB::Util::Writer.3 \ - Bio::MAGETAB::Util::Writer::ADF.3 \ - Bio::MAGETAB::Util::Writer::GraphViz.3 \ - Bio::MAGETAB::Util::Writer::IDF.3 \ - Bio::MAGETAB::Util::Writer::SDRF.3 \ - Bio::MAGETAB::Util::Writer::Tabfile.3 - -NO_STAGE= yes post-patch: @${REINPLACE_CMD} -e '/^auto_install;/d' ${WRKSRC}/Makefile.PL diff --git a/biology/p5-Bio-MAGETAB/distinfo b/biology/p5-Bio-MAGETAB/distinfo index c78d2f45471e..ff57e2a15045 100644 --- a/biology/p5-Bio-MAGETAB/distinfo +++ b/biology/p5-Bio-MAGETAB/distinfo @@ -1,2 +1,2 @@ -SHA256 (Bio-MAGETAB-1.27.tar.gz) = 46017303ce51f8ba749d363cd763792273df96602d28f1d2de5c2947530cdb4d -SIZE (Bio-MAGETAB-1.27.tar.gz) = 254374 +SHA256 (Bio-MAGETAB-1.28.tar.gz) = 75e0e52300400bb6e73d2593ac29ef87fcf28653c0a7a039c2c937abcedb5a08 +SIZE (Bio-MAGETAB-1.28.tar.gz) = 260154 diff --git a/biology/p5-Bio-MAGETAB/pkg-plist b/biology/p5-Bio-MAGETAB/pkg-plist index b67a1e5aa664..e902096a8b7a 100644 --- a/biology/p5-Bio-MAGETAB/pkg-plist +++ b/biology/p5-Bio-MAGETAB/pkg-plist @@ -60,6 +60,63 @@ bin/unload_magetab_namespace.pl %%SITE_PERL%%/Bio/MAGETAB/FactorValue.pm %%SITE_PERL%%/Bio/MAGETAB/DataMatrix.pm %%SITE_PERL%%/Bio/MAGETAB.pm +%%PERL5_MAN3%%/Bio::MAGETAB.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::ArrayDesign.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Assay.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::BaseClass.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Comment.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::CompositeElement.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Contact.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::ControlledTerm.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Data.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::DataAcquisition.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::DataFile.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::DataMatrix.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::DatabaseEntry.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::DesignElement.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Edge.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Event.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Extract.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Factor.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::FactorValue.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Feature.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Investigation.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::LabeledExtract.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Material.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::MatrixColumn.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::MatrixRow.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Measurement.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Node.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Normalization.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::ParameterValue.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Protocol.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::ProtocolApplication.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::ProtocolParameter.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Publication.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Reporter.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::SDRF.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::SDRFRow.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Sample.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Source.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::TermSource.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Types.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Builder.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::DBLoader.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Persistence.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader::ADF.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader::DataMatrix.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader::IDF.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader::SDRF.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader::Tabfile.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Reader::TagValueFile.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::RewriteAE.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Writer.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Writer::ADF.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Writer::GraphViz.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Writer::IDF.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Writer::SDRF.3.gz +%%PERL5_MAN3%%/Bio::MAGETAB::Util::Writer::Tabfile.3.gz @dirrm %%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio/MAGETAB @dirrmtry %%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio @dirrm %%SITE_PERL%%/Bio/MAGETAB/Util/Reader -- cgit v1.2.3