From 0e64ad403b88d478a0d6be136e330d0d9fe31a16 Mon Sep 17 00:00:00 2001
From: Mathieu Arnold <mat@FreeBSD.org>
Date: Mon, 24 Nov 2014 16:21:24 +0000
Subject: Fix build with Perl 5.18+.  While there, add a runtime dependency on
 Perl, a few installed scripts need it.

Sponsored by:	Absolight
---
 science/minc2/Makefile                             |  2 +-
 science/minc2/files/patch-Makefile.am              |  4 +--
 science/minc2/files/patch-progs_mincpik_mincpik.in | 38 ++++++++++++++++++++++
 3 files changed, 41 insertions(+), 3 deletions(-)
 create mode 100644 science/minc2/files/patch-progs_mincpik_mincpik.in

(limited to 'science')

diff --git a/science/minc2/Makefile b/science/minc2/Makefile
index 467d13831205..e13e482e0fcb 100644
--- a/science/minc2/Makefile
+++ b/science/minc2/Makefile
@@ -3,6 +3,7 @@
 
 PORTNAME=	minc
 PORTVERSION=	2.2.00
+PORTREVISION=	1
 PORTEPOCH=	1
 CATEGORIES=	science biology
 MASTER_SITES=	GH
@@ -24,7 +25,6 @@ GH_COMMIT=	6f2f5b9
 
 USES=		bison gmake libtool perl5 shebangfix
 SHEBANG_FILES=	progs/mincview/mincview
-USE_PERL5=	build
 USE_AUTOTOOLS=	libtoolize aclocal autoheader automake autoconf
 ACLOCAL_ARGS=	-I m4 --automake-acdir=${ACLOCAL_DIR}
 AUTOMAKE_ARGS=	--add-missing --copy --force-missing
diff --git a/science/minc2/files/patch-Makefile.am b/science/minc2/files/patch-Makefile.am
index e38283aec741..b6f53bf7c248 100644
--- a/science/minc2/files/patch-Makefile.am
+++ b/science/minc2/files/patch-Makefile.am
@@ -1,6 +1,6 @@
---- Makefile.am.orig
+--- Makefile.am.orig	2012-09-24 17:35:36 UTC
 +++ Makefile.am
-@@ -274,28 +274,28 @@
+@@ -274,28 +274,28 @@ m4_files = \
  	m4/smr_WITH_BUILD_PATH.m4
  
  ezMINC_files = \
diff --git a/science/minc2/files/patch-progs_mincpik_mincpik.in b/science/minc2/files/patch-progs_mincpik_mincpik.in
new file mode 100644
index 000000000000..40bdb5d54eb5
--- /dev/null
+++ b/science/minc2/files/patch-progs_mincpik_mincpik.in
@@ -0,0 +1,38 @@
+--- progs/mincpik/mincpik.in.orig	2012-09-24 17:35:36 UTC
++++ progs/mincpik/mincpik.in
+@@ -576,8 +576,11 @@ font point size for the title
+ 
+ create an annotated bar to match the image (use height of the output image)
+ 
++=back
+ 
+ =head3 Image range and lookup table options
++
++=over
+    
+ =item B<--range>
+ 
+@@ -595,8 +598,11 @@ automatically determine image range usin
+ 
+ arguments to pass to minclookup
+ 
++=back
+ 
+ =head3 Slicing options
++
++=over
+    
+ =item B<-s> B<--slice>
+ 
+@@ -614,8 +620,11 @@ get a coronal (y) slice
+ 
+ get a sagital (x) slice
+ 
++=back
+ 
+ =head3 Triplanar options
++
++=over
+    
+ =item B<-t> B<--triplanar>
+ 
-- 
cgit v1.2.3