act-2.0/CVS/Root act-2.0/CVS/Repository act-2.0/CVS/Entries act-2.0/.cvsignore act-2.0/AppGlobal.java act-2.0/Dad.java act-2.0/Makefile act-2.0/act act-2.0/icon.gif act-2.0/META-INF/CVS/Root act-2.0/META-INF/CVS/Repository act-2.0/META-INF/CVS/Entries act-2.0/META-INF/MANIFEST.MF act-2.0/diana/CVS/Root act-2.0/diana/CVS/Repository act-2.0/diana/CVS/Entries act-2.0/diana/Action.java act-2.0/diana/ActionController.java act-2.0/diana/ActionVector.java act-2.0/diana/AlignMatch.java act-2.0/diana/AlignMatchVector.java act-2.0/diana/AlignmentSelectionChangeEvent.java act-2.0/diana/AlignmentSelectionChangeListener.java act-2.0/diana/BlastM8ComparisonData.java act-2.0/diana/ChangeEvent.java act-2.0/diana/ChangeEventVector.java act-2.0/diana/ChangeListener.java act-2.0/diana/ClipBoard.java act-2.0/diana/ComparisonData.java act-2.0/diana/ComparisonDataFactory.java act-2.0/diana/Entry.java act-2.0/diana/plot/CVS/Root act-2.0/diana/plot/CVS/Repository act-2.0/diana/plot/CVS/Entries act-2.0/diana/plot/AGWindowAlgorithm.java act-2.0/diana/plot/ATDeviationAlgorithm.java act-2.0/diana/plot/Algorithm.java act-2.0/diana/plot/BaseAlgorithm.java act-2.0/diana/plot/Codon12CorrelationAlgorithm.java act-2.0/diana/plot/CodonUsageAlgorithm.java act-2.0/diana/plot/CodonUsageFormatException.java act-2.0/diana/plot/CodonUsageWeight.java act-2.0/diana/plot/CodonWeight.java act-2.0/diana/plot/CoilFeatureAlgorithm.java act-2.0/diana/plot/HydroAlgorithm.java act-2.0/diana/plot/FeatureAlgorithm.java act-2.0/diana/plot/GCDeviationAlgorithm.java act-2.0/diana/plot/GCFrameAlgorithm.java act-2.0/diana/plot/GCSDWindowAlgorithm.java act-2.0/diana/plot/GCWindowAlgorithm.java act-2.0/diana/plot/HydrophilicityAlgorithm.java act-2.0/diana/plot/HydrophobicityAlgorithm.java act-2.0/diana/plot/KarlinSigAlgorithm.java act-2.0/diana/plot/UserDataAlgorithm.java act-2.0/diana/plot/Algorithm.class act-2.0/diana/plot/BaseAlgorithm.class act-2.0/diana/plot/CodonUsageAlgorithm.class act-2.0/diana/plot/CodonWeight.class act-2.0/diana/plot/CodonUsageWeight.class act-2.0/diana/plot/Codon12CorrelationAlgorithm.class act-2.0/diana/plot/GCWindowAlgorithm.class act-2.0/diana/plot/GCSDWindowAlgorithm.class act-2.0/diana/plot/AGWindowAlgorithm.class act-2.0/diana/plot/GCFrameAlgorithm.class act-2.0/diana/plot/GCDeviationAlgorithm.class act-2.0/diana/plot/ATDeviationAlgorithm.class act-2.0/diana/plot/KarlinSigAlgorithm.class act-2.0/diana/plot/CodonUsageFormatException.class act-2.0/diana/plot/UserDataAlgorithm.class act-2.0/diana/plot/FeatureAlgorithm.class act-2.0/diana/plot/HydroAlgorithm.class act-2.0/diana/plot/HydrophobicityAlgorithm.class act-2.0/diana/plot/HydrophilicityAlgorithm.class act-2.0/diana/plot/CoilFeatureAlgorithm.class act-2.0/diana/ComparisonDataParseException.java act-2.0/diana/EntryChangeEvent.java act-2.0/diana/EntryChangeListener.java act-2.0/diana/EntryGroup.java act-2.0/diana/EntryGroupChangeEvent.java act-2.0/diana/EntryGroupChangeListener.java act-2.0/diana/EntrySource.java act-2.0/diana/EntrySourceVector.java act-2.0/diana/EntryVector.java act-2.0/diana/ExternalApplication.java act-2.0/diana/ExternalProgram.java act-2.0/diana/ExternalProgramException.java act-2.0/diana/ExternalProgramVector.java act-2.0/diana/ExternalSearchProgram.java act-2.0/diana/Feature.java act-2.0/diana/FeatureChangeEvent.java act-2.0/diana/FeatureChangeListener.java act-2.0/diana/FeatureEnumeration.java act-2.0/diana/FeatureFromVectorPredicate.java act-2.0/diana/FeatureKeyPredicate.java act-2.0/diana/FeaturePredicate.java act-2.0/diana/FeatureKeyQualifierPredicate.java act-2.0/diana/FeaturePatternPredicate.java act-2.0/diana/FeaturePredicateConjunction.java act-2.0/diana/FeatureSegment.java act-2.0/diana/FeatureSegmentVector.java act-2.0/diana/FeatureVector.java act-2.0/diana/FilteredEntryGroup.java act-2.0/diana/GotoEvent.java act-2.0/diana/GotoListener.java act-2.0/diana/GotoEventSource.java act-2.0/diana/LastSegmentException.java act-2.0/diana/Logger.java act-2.0/diana/MSPcrunchComparisonData.java act-2.0/diana/MUMmerComparisonData.java act-2.0/diana/MegaBlastComparisonData.java act-2.0/diana/OptionChangeEvent.java act-2.0/diana/OptionChangeListener.java act-2.0/diana/Options.java act-2.0/diana/SSAHAComparisonData.java act-2.0/diana/Selectable.java act-2.0/diana/Selection.java act-2.0/diana/SelectionChangeEvent.java act-2.0/diana/SelectionChangeListener.java act-2.0/diana/SimpleComparisonData.java act-2.0/diana/helix.gif act-2.0/diana/SimpleEntryGroup.java act-2.0/diana/SimpleGotoEventSource.java act-2.0/diana/sanger-centre.gif act-2.0/diana/components/CVS/Root act-2.0/diana/components/CVS/Repository act-2.0/diana/components/CVS/Entries act-2.0/diana/components/ActMain.java act-2.0/diana/components/AddMenu.java act-2.0/diana/components/AlignMatchViewer.java act-2.0/diana/components/AlignmentEvent.java act-2.0/diana/components/AlignmentListener.java act-2.0/diana/components/AlignmentViewer.java act-2.0/diana/components/ArtemisCheckboxMenuItem.java act-2.0/diana/components/ArtemisMain.java act-2.0/diana/components/BasePlot.java act-2.0/diana/components/BasePlotGroup.java act-2.0/diana/components/BioJavaEntrySource.java act-2.0/diana/components/CanvasPanel.java act-2.0/diana/components/ChoiceFrame.java act-2.0/diana/components/ComparatorDialog.java act-2.0/diana/components/ComparatorGlue.java act-2.0/diana/components/CorbaEntrySource.java act-2.0/diana/components/DisplayAdjustmentEvent.java act-2.0/diana/components/DisplayAdjustmentListener.java act-2.0/diana/components/DisplayComponent.java act-2.0/diana/components/EMBLCorbaEntrySource.java act-2.0/diana/components/EditMenu.java act-2.0/diana/components/EnsemblEntrySource.java act-2.0/diana/components/EntryActionListener.java act-2.0/diana/components/EntryEdit.java act-2.0/diana/components/EntryGroupMenu.java act-2.0/diana/components/EntryEditVector.java act-2.0/diana/components/EntryFileDialog.java act-2.0/diana/components/EntryGroupDisplay.java act-2.0/diana/components/EntryGroupInfoDisplay.java act-2.0/diana/components/EntryGroupPanel.java act-2.0/diana/components/EntryHeaderEdit.java act-2.0/diana/components/FeatureDisplay.java act-2.0/diana/components/ExternalProgramOptions.java act-2.0/diana/components/FeatureAminoAcidViewer.java act-2.0/diana/components/FeatureBaseViewer.java act-2.0/diana/components/FeatureEdit.java act-2.0/diana/components/FeatureInfo.java act-2.0/diana/components/FileViewer.java act-2.0/diana/components/FeatureList.java act-2.0/diana/components/FeatureListFrame.java act-2.0/diana/components/FeaturePlot.java act-2.0/diana/components/FeaturePlotGroup.java act-2.0/diana/components/FeaturePopup.java act-2.0/diana/components/FeatureViewer.java act-2.0/diana/components/FileDialogEntrySource.java act-2.0/diana/components/GotoMenu.java act-2.0/diana/components/GraphMenu.java act-2.0/diana/components/InputStreamProgressDialog.java act-2.0/diana/components/KeyChoice.java act-2.0/diana/components/KeyChooser.java act-2.0/diana/components/ListDialog.java act-2.0/diana/components/LogViewer.java act-2.0/diana/components/MarkerRangeRequester.java act-2.0/diana/components/MarkerRangeRequesterEvent.java act-2.0/diana/components/MarkerRangeRequesterListener.java act-2.0/diana/components/MessageDialog.java act-2.0/diana/components/MessageFrame.java act-2.0/diana/components/MultiComparator.java act-2.0/diana/components/Navigator.java act-2.0/diana/components/Plot.java act-2.0/diana/components/PlotMouseListener.java act-2.0/diana/components/ProcessWatcher.java act-2.0/diana/components/ProcessWatcherEvent.java act-2.0/diana/components/ProcessWatcherListener.java act-2.0/diana/components/RunMenu.java act-2.0/diana/components/QualifierChoice.java act-2.0/diana/components/QualifierEditor.java act-2.0/diana/components/QualifierTextArea.java act-2.0/diana/components/RawFeatureEdit.java act-2.0/diana/components/ScoreChangeEvent.java act-2.0/diana/components/ScoreChangeListener.java act-2.0/diana/components/ScoreChanger.java act-2.0/diana/components/ScoreScrollbar.java act-2.0/diana/components/SearchResultViewer.java act-2.0/diana/components/SelectMenu.java act-2.0/diana/components/SelectionInfoDisplay.java act-2.0/diana/components/SelectionMenu.java act-2.0/diana/components/SelectionViewer.java act-2.0/diana/components/Selector.java act-2.0/diana/components/SequenceViewer.java act-2.0/diana/components/Splash.java act-2.0/diana/components/TextDialog.java act-2.0/diana/components/TextRequester.java act-2.0/diana/components/Plot.class act-2.0/diana/components/TextRequesterEvent.java act-2.0/diana/components/TextRequesterListener.java act-2.0/diana/components/Utilities.java act-2.0/diana/components/ViewMenu.java act-2.0/diana/components/WritableEMBLCorbaEntrySource.java act-2.0/diana/components/WriteMenu.java act-2.0/diana/components/YesNoDialog.java act-2.0/diana/components/Splash.class act-2.0/diana/components/Splash$1.class act-2.0/diana/components/Splash$2.class act-2.0/diana/components/Splash$3.class act-2.0/diana/components/Splash$4.class act-2.0/diana/components/Splash$5.class act-2.0/diana/components/Splash$6.class act-2.0/diana/components/Splash$7.class act-2.0/diana/components/Splash$8.class act-2.0/diana/components/Splash$9.class act-2.0/diana/components/Splash$10.class act-2.0/diana/components/ActMain.class act-2.0/diana/components/ActMain$1.class act-2.0/diana/components/ActMain$2.class act-2.0/diana/components/LogViewer.class act-2.0/diana/components/LogViewer$1.class act-2.0/diana/components/FileViewer.class act-2.0/diana/components/FileViewer$1.class act-2.0/diana/components/FileViewer$2.class act-2.0/diana/components/FileViewer$3.class act-2.0/diana/components/FileDialogEntrySource.class act-2.0/diana/components/MessageDialog.class act-2.0/diana/components/MessageDialog$1.class act-2.0/diana/components/MessageDialog$2.class act-2.0/diana/components/MessageDialog$3.class act-2.0/diana/components/CorbaEntrySource.class act-2.0/diana/components/EMBLCorbaEntrySource.class act-2.0/diana/components/WritableEMBLCorbaEntrySource.class act-2.0/diana/components/MessageFrame.class act-2.0/diana/components/EntryFileDialog.class act-2.0/diana/components/MessageFrame$1.class act-2.0/diana/components/MessageFrame$2.class act-2.0/diana/components/MessageFrame$3.class act-2.0/diana/components/MultiComparator.class act-2.0/diana/components/MultiComparator$1.class act-2.0/diana/components/MultiComparator$2.class act-2.0/diana/components/MultiComparator$3.class act-2.0/diana/components/MultiComparator$4.class act-2.0/diana/components/MultiComparator$5.class act-2.0/diana/components/MultiComparator$6.class act-2.0/diana/components/MultiComparator$7.class act-2.0/diana/components/BasePlotGroup.class act-2.0/diana/components/MultiComparator$8.class act-2.0/diana/components/MultiComparator$9.class act-2.0/diana/components/MultiComparator$10.class act-2.0/diana/components/MultiComparator$11.class act-2.0/diana/components/MultiComparator$12.class act-2.0/diana/components/ComparatorGlue.class act-2.0/diana/components/ComparatorGlue$1.class act-2.0/diana/components/ComparatorGlue$2.class act-2.0/diana/components/ComparatorGlue$3.class act-2.0/diana/components/ComparatorGlue$4.class act-2.0/diana/components/ComparatorGlue$5.class act-2.0/diana/components/DisplayAdjustmentListener.class act-2.0/diana/components/DisplayComponent.class act-2.0/diana/components/CanvasPanel.class act-2.0/diana/components/CanvasPanel$1.class act-2.0/diana/components/EntryGroupPanel.class act-2.0/diana/components/EntryGroupPanel$1.class act-2.0/diana/components/FeatureDisplay.class act-2.0/diana/components/Plot$1.class act-2.0/diana/components/FeatureDisplay$1.class act-2.0/diana/components/FeatureDisplay$2.class act-2.0/diana/components/FeatureDisplay$3.class act-2.0/diana/components/FeatureDisplay$4.class act-2.0/diana/components/FeatureDisplay$5.class act-2.0/diana/components/FeatureDisplay$6.class act-2.0/diana/components/FeatureDisplay$7.class act-2.0/diana/components/AlignmentViewer.class act-2.0/diana/components/AlignmentViewer$1.class act-2.0/diana/components/AlignmentViewer$2.class act-2.0/diana/components/AlignmentViewer$3.class act-2.0/diana/components/AlignmentViewer$4.class act-2.0/diana/components/AlignmentViewer$5.class act-2.0/diana/components/AlignmentViewer$6.class act-2.0/diana/components/AlignmentViewer$7.class act-2.0/diana/components/AlignmentViewer$8.class act-2.0/diana/components/AlignmentViewer$9.class act-2.0/diana/components/AlignmentViewer$10.class act-2.0/diana/components/AlignmentViewer$11.class act-2.0/diana/components/AlignmentViewer$12.class act-2.0/diana/components/AlignmentViewer$13.class act-2.0/diana/components/AlignmentViewer$14.class act-2.0/diana/components/AlignmentViewer$15.class act-2.0/diana/components/AlignmentViewer$16.class act-2.0/diana/components/AlignmentViewer$17.class act-2.0/diana/components/AlignmentViewer$18.class act-2.0/diana/components/AlignmentListener.class act-2.0/diana/components/Plot$2.class act-2.0/diana/components/Plot$3.class act-2.0/diana/components/Plot$4.class act-2.0/diana/components/Plot$5.class act-2.0/diana/components/Plot$6.class act-2.0/diana/components/Plot$7.class act-2.0/diana/components/BasePlot.class act-2.0/diana/components/BasePlot$1.class act-2.0/diana/components/DisplayAdjustmentEvent.class act-2.0/diana/components/PlotMouseListener.class act-2.0/diana/components/AlignmentEvent.class act-2.0/diana/components/ComparatorDialog.class act-2.0/diana/components/ComparatorDialog$1.class act-2.0/diana/components/ComparatorDialog$2.class act-2.0/diana/components/ComparatorDialog$3.class act-2.0/diana/components/ComparatorDialog$4.class act-2.0/diana/components/TextDialog.class act-2.0/diana/components/ComparatorDialog$5.class act-2.0/diana/components/TextDialog$1.class act-2.0/diana/components/TextDialog$2.class act-2.0/diana/components/TextDialog$3.class act-2.0/diana/components/ListDialog.class act-2.0/diana/components/ListDialog$1.class act-2.0/diana/components/ListDialog$2.class act-2.0/diana/components/YesNoDialog.class act-2.0/diana/components/YesNoDialog$1.class act-2.0/diana/components/YesNoDialog$2.class act-2.0/diana/components/InputStreamProgressDialog.class act-2.0/diana/components/InputStreamProgressDialog$1.class act-2.0/diana/components/ViewMenu.class act-2.0/diana/components/InputStreamProgressDialog$2.class act-2.0/diana/components/InputStreamProgressDialog$3.class act-2.0/diana/components/EntryGroupMenu.class act-2.0/diana/components/EntryGroupMenu$1.class act-2.0/diana/components/EntryGroupMenu$2.class act-2.0/diana/components/EntryGroupMenu$3.class act-2.0/diana/components/EntryGroupMenu$4.class act-2.0/diana/components/EntryGroupMenu$5.class act-2.0/diana/components/EntryGroupMenu$6.class act-2.0/diana/components/EntryGroupMenu$7.class act-2.0/diana/components/SelectionMenu.class act-2.0/diana/components/SelectMenu.class act-2.0/diana/components/SelectMenu$1.class act-2.0/diana/components/SelectMenu$2.class act-2.0/diana/components/SelectMenu$3.class act-2.0/diana/components/SelectMenu$4.class act-2.0/diana/components/SelectMenu$5.class act-2.0/diana/components/SelectMenu$6.class act-2.0/diana/components/SelectMenu$7.class act-2.0/diana/components/SelectMenu$8.class act-2.0/diana/components/SelectMenu$9.class act-2.0/diana/components/SelectMenu$10.class act-2.0/diana/components/SelectMenu$11.class act-2.0/diana/components/SelectMenu$12.class act-2.0/diana/components/SelectMenu$13.class act-2.0/diana/components/SelectMenu$14.class act-2.0/diana/components/SelectMenu$15.class act-2.0/diana/components/SelectMenu$16.class act-2.0/diana/components/ViewMenu$1.class act-2.0/diana/components/ViewMenu$2.class act-2.0/diana/components/ViewMenu$3.class act-2.0/diana/components/ViewMenu$4.class act-2.0/diana/components/ViewMenu$5.class act-2.0/diana/components/ViewMenu$6.class act-2.0/diana/components/ViewMenu$7.class act-2.0/diana/components/ViewMenu$8.class act-2.0/diana/components/ViewMenu$9.class act-2.0/diana/components/ViewMenu$10.class act-2.0/diana/components/ViewMenu$11.class act-2.0/diana/components/ViewMenu$12.class act-2.0/diana/components/ViewMenu$13.class act-2.0/diana/components/ViewMenu$14.class act-2.0/diana/components/ViewMenu$15.class act-2.0/diana/components/ViewMenu$16.class act-2.0/diana/components/ViewMenu$17.class act-2.0/diana/components/ViewMenu$18.class act-2.0/diana/components/ViewMenu$19.class act-2.0/diana/components/ViewMenu$20.class act-2.0/diana/components/ViewMenu$21.class act-2.0/diana/components/ViewMenu$22.class act-2.0/diana/components/ViewMenu$23.class act-2.0/diana/components/ViewMenu$24.class act-2.0/diana/components/ViewMenu$25.class act-2.0/diana/components/ViewMenu$26.class act-2.0/diana/components/ViewMenu$27.class act-2.0/diana/components/ViewMenu$28.class act-2.0/diana/components/ViewMenu$29.class act-2.0/diana/components/ViewMenu$30.class act-2.0/diana/components/ViewMenu$31.class act-2.0/diana/components/GotoMenu.class act-2.0/diana/components/GotoMenu$1.class act-2.0/diana/components/GotoMenu$2.class act-2.0/diana/components/GotoMenu$3.class act-2.0/diana/components/GotoMenu$4.class act-2.0/diana/components/GotoMenu$5.class act-2.0/diana/components/GotoMenu$6.class act-2.0/diana/components/GotoMenu$7.class act-2.0/diana/components/GotoMenu$8.class act-2.0/diana/components/GotoMenu$9.class act-2.0/diana/components/GotoMenu$10.class act-2.0/diana/components/AddMenu.class act-2.0/diana/components/AddMenu$1.class act-2.0/diana/components/AddMenu$2.class act-2.0/diana/components/AddMenu$3.class act-2.0/diana/components/AddMenu$4.class act-2.0/diana/components/AddMenu$5.class act-2.0/diana/components/AddMenu$6.class act-2.0/diana/components/AddMenu$7.class act-2.0/diana/components/AddMenu$8.class act-2.0/diana/components/AddMenu$9.class act-2.0/diana/components/AddMenu$10.class act-2.0/diana/components/AddMenu$11.class act-2.0/diana/components/AddMenu$12.class act-2.0/diana/components/AddMenu$13.class act-2.0/diana/components/AddMenu$14.class act-2.0/diana/components/AddMenu$15.class act-2.0/diana/components/EditMenu.class act-2.0/diana/components/EditMenu$1.class act-2.0/diana/components/EditMenu$2.class act-2.0/diana/components/EditMenu$3.class act-2.0/diana/components/EditMenu$4.class act-2.0/diana/components/EditMenu$5.class act-2.0/diana/components/EditMenu$6.class act-2.0/diana/components/EditMenu$7.class act-2.0/diana/components/EditMenu$8.class act-2.0/diana/components/EditMenu$9.class act-2.0/diana/components/EditMenu$10.class act-2.0/diana/components/EditMenu$11.class act-2.0/diana/components/EditMenu$12.class act-2.0/diana/components/EditMenu$13.class act-2.0/diana/components/EditMenu$14.class act-2.0/diana/components/EditMenu$15.class act-2.0/diana/components/EditMenu$16.class act-2.0/diana/components/EditMenu$17.class act-2.0/diana/components/EditMenu$18.class act-2.0/diana/components/EditMenu$19.class act-2.0/diana/components/EditMenu$20.class act-2.0/diana/components/EditMenu$21.class act-2.0/diana/components/EditMenu$22.class act-2.0/diana/components/EditMenu$23.class act-2.0/diana/components/EditMenu$24.class act-2.0/diana/components/EditMenu$25.class act-2.0/diana/components/EditMenu$26.class act-2.0/diana/components/EditMenu$27.class act-2.0/diana/components/EditMenu$28.class act-2.0/diana/components/EditMenu$29.class act-2.0/diana/components/EditMenu$30.class act-2.0/diana/components/WriteMenu.class act-2.0/diana/components/WriteMenu$1.class act-2.0/diana/components/WriteMenu$2.class act-2.0/diana/components/WriteMenu$3.class act-2.0/diana/components/WriteMenu$4.class act-2.0/diana/components/WriteMenu$5.class act-2.0/diana/components/WriteMenu$6.class act-2.0/diana/components/WriteMenu$7.class act-2.0/diana/components/WriteMenu$8.class act-2.0/diana/components/WriteMenu$9.class act-2.0/diana/components/WriteMenu$10.class act-2.0/diana/components/WriteMenu$11.class act-2.0/diana/components/WriteMenu$12.class act-2.0/diana/components/WriteMenu$13.class act-2.0/diana/components/WriteMenu$14.class act-2.0/diana/components/WriteMenu$15.class act-2.0/diana/components/WriteMenu$16.class act-2.0/diana/components/WriteMenu$17.class act-2.0/diana/components/WriteMenu$18.class act-2.0/diana/components/WriteMenu$19.class act-2.0/diana/components/WriteMenu$20.class act-2.0/diana/components/WriteMenu$21.class act-2.0/diana/components/RunMenu.class act-2.0/diana/components/RunMenu$1.class act-2.0/diana/components/RunMenu$2.class act-2.0/diana/components/RunMenu$3.class act-2.0/diana/components/GraphMenu.class act-2.0/diana/components/GraphMenu$1.class act-2.0/diana/components/GraphMenu$2.class act-2.0/diana/components/GraphMenu$3.class act-2.0/diana/components/GraphMenu$4.class act-2.0/diana/components/EntryActionListener.class act-2.0/diana/components/SaveEntryAsGFFActionListener.class act-2.0/diana/components/SaveEntryAsSubmissionActionListener.class act-2.0/diana/components/SaveEntryAsEMBLActionListener.class act-2.0/diana/components/SaveEntryAsGenbankActionListener.class act-2.0/diana/components/SaveEntryAsActionListener.class act-2.0/diana/components/SaveEntryActionListener.class act-2.0/diana/components/ReadFeaturesActionListener.class act-2.0/diana/components/EntryEdit.class act-2.0/diana/components/EntryEdit$1.class act-2.0/diana/components/EntryEdit$2.class act-2.0/diana/components/EntryEdit$3.class act-2.0/diana/components/EntryEdit$4.class act-2.0/diana/components/EntryEdit$5.class act-2.0/diana/components/EntryEdit$6.class act-2.0/diana/components/EntryEdit$7.class act-2.0/diana/components/KeyChoice.class act-2.0/diana/components/EntryEdit$8.class act-2.0/diana/components/EntryEdit$9.class act-2.0/diana/components/EntryEdit$10.class act-2.0/diana/components/FeatureList.class act-2.0/diana/components/FeatureList$1.class act-2.0/diana/components/FeatureList$2.class act-2.0/diana/components/FeatureList$3.class act-2.0/diana/components/SelectionInfoDisplay.class act-2.0/diana/components/SelectionInfoDisplay$1.class act-2.0/diana/components/EntryGroupDisplay.class act-2.0/diana/components/EntryGroupDisplay$1.class act-2.0/diana/components/EntryGroupDisplay$2.class act-2.0/diana/components/FeaturePopup.class act-2.0/diana/components/EntryGroupInfoDisplay.class act-2.0/diana/components/EntryGroupInfoDisplay$1.class act-2.0/diana/components/FeaturePopup$1.class act-2.0/diana/components/EntryGroupInfoDisplay$2.class act-2.0/diana/components/EntryGroupInfoDisplay$3.class act-2.0/diana/components/FeaturePopup$2.class act-2.0/diana/components/FeaturePopup$3.class act-2.0/diana/components/FeaturePopup$4.class act-2.0/diana/components/FeaturePopup$5.class act-2.0/diana/components/FeaturePopup$6.class act-2.0/diana/components/FeaturePopup$7.class act-2.0/diana/components/FeaturePopup$8.class act-2.0/diana/components/FeaturePopup$9.class act-2.0/diana/components/FeaturePopup$10.class act-2.0/diana/components/FeaturePopup$11.class act-2.0/diana/components/FeaturePopup$12.class act-2.0/diana/components/FeaturePopup$13.class act-2.0/diana/components/FeaturePopup$14.class act-2.0/diana/components/FeaturePopup$15.class act-2.0/diana/components/FeaturePopup$16.class act-2.0/diana/components/FeaturePopup$17.class act-2.0/diana/components/FeaturePopup$18.class act-2.0/diana/components/FeaturePopup$19.class act-2.0/diana/components/FeaturePopup$20.class act-2.0/diana/components/FeaturePopup$21.class act-2.0/diana/components/FeaturePopup$22.class act-2.0/diana/components/FeaturePopup$23.class act-2.0/diana/components/FeaturePopup$24.class act-2.0/diana/components/FeaturePopup$25.class act-2.0/diana/components/FeaturePopup$26.class act-2.0/diana/components/FeatureEdit.class act-2.0/diana/components/FeatureEdit$1.class act-2.0/diana/components/FeatureEdit$2.class act-2.0/diana/components/FeatureEdit$3.class act-2.0/diana/components/FeatureEdit$4.class act-2.0/diana/components/FeatureEdit$5.class act-2.0/diana/components/FeatureEdit$6.class act-2.0/diana/components/FeatureEdit$7.class act-2.0/diana/components/FeatureEdit$8.class act-2.0/diana/components/FeatureEdit$9.class act-2.0/diana/components/FeatureEdit$10.class act-2.0/diana/components/FeatureEdit$11.class act-2.0/diana/components/FeatureEdit$12.class act-2.0/diana/components/FeatureEdit$13.class act-2.0/diana/components/FeatureEdit$14.class act-2.0/diana/components/FeatureEdit$15.class act-2.0/diana/components/QualifierTextArea.class act-2.0/diana/components/QualifierChoice.class act-2.0/diana/components/KeyChoice$1.class act-2.0/diana/components/AlignMatchViewer.class act-2.0/diana/components/ScoreChanger.class act-2.0/diana/components/AlignMatchViewer$1.class act-2.0/diana/components/AlignMatchViewer$2.class act-2.0/diana/components/AlignMatchViewer$3.class act-2.0/diana/components/AlignMatchViewer$4.class act-2.0/diana/components/AlignMatchViewer$5.class act-2.0/diana/components/AlignMatchViewer$6.class act-2.0/diana/components/AlignMatchViewer$7.class act-2.0/diana/components/AlignMatchViewer$8.class act-2.0/diana/components/AlignMatchViewer$9.class act-2.0/diana/components/AlignMatchViewer$10.class act-2.0/diana/components/AlignMatchViewer$11.class act-2.0/diana/components/AlignMatchViewer$12.class act-2.0/diana/components/AlignMatchViewer$13.class act-2.0/diana/components/ScoreChangeListener.class act-2.0/diana/components/ScoreChangeEvent.class act-2.0/diana/components/ScoreChanger$1.class act-2.0/diana/components/ScoreChanger$2.class act-2.0/diana/components/ScoreChanger$3.class act-2.0/diana/components/ScoreChanger$4.class act-2.0/diana/components/ScoreChanger$5.class act-2.0/diana/components/ScoreScrollbar.class act-2.0/diana/components/TextRequester.class act-2.0/diana/components/TextRequester$1.class act-2.0/diana/components/TextRequester$2.class act-2.0/diana/components/TextRequester$3.class act-2.0/diana/components/TextRequesterEvent.class act-2.0/diana/components/TextRequesterListener.class act-2.0/diana/components/Selector.class act-2.0/diana/components/Selector$1.class act-2.0/diana/components/Selector$2.class act-2.0/diana/components/Selector$3.class act-2.0/diana/components/Selector$4.class act-2.0/diana/components/Selector$5.class act-2.0/diana/components/Selector$6.class act-2.0/diana/components/Selector$7.class act-2.0/diana/components/Selector$8.class act-2.0/diana/components/Selector$9.class act-2.0/diana/components/Selector$10.class act-2.0/diana/components/Selector$11.class act-2.0/diana/components/Selector$12.class act-2.0/diana/components/Selector$13.class act-2.0/diana/components/Selector$14.class act-2.0/diana/components/KeyChooser.class act-2.0/diana/components/KeyChooser$1.class act-2.0/diana/components/KeyChooser$2.class act-2.0/diana/components/KeyChooser$3.class act-2.0/diana/components/MarkerRangeRequester.class act-2.0/diana/components/FeatureViewer.class act-2.0/diana/components/MarkerRangeRequesterEvent.class act-2.0/diana/components/MarkerRangeRequesterListener.class act-2.0/diana/components/SelectionViewer.class act-2.0/diana/components/SelectionViewer$1.class act-2.0/diana/components/FeatureListFrame.class act-2.0/diana/components/FeatureListFrame$1.class act-2.0/diana/components/FeatureListFrame$2.class act-2.0/diana/components/FeatureListFrame$3.class act-2.0/diana/components/FeatureViewer$1.class act-2.0/diana/components/FeaturePlotGroup.class act-2.0/diana/components/FeaturePlotGroup$1.class act-2.0/diana/components/FeaturePlotGroup$2.class act-2.0/diana/components/FeaturePlotGroup$3.class act-2.0/diana/components/FeaturePlotGroup$4.class act-2.0/diana/components/FeaturePlotGroup$5.class act-2.0/diana/components/SearchResultViewer.class act-2.0/diana/components/SearchResultViewer$1.class act-2.0/diana/components/FeatureInfo.class act-2.0/diana/components/FeatureInfo$1.class act-2.0/diana/components/FeatureInfo$2.class act-2.0/diana/components/FeatureBaseViewer.class act-2.0/diana/components/FeatureBaseViewer$1.class act-2.0/diana/components/SequenceViewer.class act-2.0/diana/components/FeatureAminoAcidViewer.class act-2.0/diana/components/FeatureAminoAcidViewer$1.class act-2.0/diana/components/Navigator.class act-2.0/diana/components/Navigator$1.class act-2.0/diana/components/Navigator$2.class act-2.0/diana/components/Navigator$3.class act-2.0/diana/components/Navigator$4.class act-2.0/diana/components/Navigator$5.class act-2.0/diana/components/Navigator$6.class act-2.0/diana/components/Navigator$7.class act-2.0/diana/components/Navigator$8.class act-2.0/diana/components/Navigator$9.class act-2.0/diana/components/Navigator$10.class act-2.0/diana/components/EntryHeaderEdit.class act-2.0/diana/components/Utilities.class act-2.0/diana/components/EntryHeaderEdit$1.class act-2.0/diana/components/QualifierEditor.class act-2.0/diana/components/QualifierEditor$1.class act-2.0/diana/components/QualifierEditor$2.class act-2.0/diana/components/QualifierEditor$3.class act-2.0/diana/components/QualifierEditor$4.class act-2.0/diana/components/QualifierEditor$5.class act-2.0/diana/components/ChoiceFrame.class act-2.0/diana/components/ChoiceFrame$1.class act-2.0/diana/components/ChoiceFrame$2.class act-2.0/diana/components/ChoiceFrame$3.class act-2.0/diana/components/ProcessWatcher.class act-2.0/diana/components/ProcessWatcherListener.class act-2.0/diana/components/ProcessWatcherEvent.class act-2.0/diana/components/ExternalProgramOptions.class act-2.0/diana/components/ExternalProgramOptions$1.class act-2.0/diana/components/ArtemisCheckboxMenuItem.class act-2.0/diana/components/FeaturePlot.class act-2.0/diana/sequence/CVS/Root act-2.0/diana/sequence/CVS/Repository act-2.0/diana/sequence/CVS/Entries act-2.0/diana/sequence/AminoAcidSequence.java act-2.0/diana/sequence/BasePattern.java act-2.0/diana/sequence/BasePatternFormatException.java act-2.0/diana/sequence/Bases.java act-2.0/diana/sequence/Marker.java act-2.0/diana/sequence/MarkerChangeEvent.java act-2.0/diana/sequence/MarkerChangeListener.java act-2.0/diana/sequence/MarkerRange.java act-2.0/diana/sequence/MarkerRangeVector.java act-2.0/diana/sequence/NoSequenceException.java act-2.0/diana/sequence/SequenceChangeEvent.java act-2.0/diana/sequence/SequenceChangeListener.java act-2.0/diana/sequence/Strand.java act-2.0/diana/sequence/NoSequenceException.class act-2.0/diana/sequence/Bases.class act-2.0/diana/sequence/Strand.class act-2.0/diana/sequence/MarkerChangeListener.class act-2.0/diana/sequence/SequenceChangeEvent.class act-2.0/diana/sequence/SequenceChangeListener.class act-2.0/diana/sequence/AminoAcidSequence.class act-2.0/diana/sequence/MarkerRange.class act-2.0/diana/sequence/MarkerInternal.class act-2.0/diana/sequence/Marker.class act-2.0/diana/sequence/MarkerChangeEvent.class act-2.0/diana/sequence/BasePattern.class act-2.0/diana/sequence/MarkerRangeVector.class act-2.0/diana/sequence/BasePatternFormatException.class act-2.0/diana/EntrySourceVector.class act-2.0/diana/Logger.class act-2.0/diana/EntrySource.class act-2.0/diana/FeatureEnumeration.class act-2.0/diana/Selectable.class act-2.0/diana/ChangeListener.class act-2.0/diana/FeatureChangeListener.class act-2.0/diana/Entry.class act-2.0/diana/Entry$FeatureEnumerator.class act-2.0/diana/FeatureVector.class act-2.0/diana/OptionChangeListener.class act-2.0/diana/EntryChangeListener.class act-2.0/diana/ChangeEvent.class act-2.0/diana/FeatureChangeEvent.class act-2.0/diana/Feature.class act-2.0/diana/Options.class act-2.0/diana/ExternalProgramVector.class act-2.0/diana/LastSegmentException.class act-2.0/diana/FeatureSegment.class act-2.0/diana/FeatureSegmentVector.class act-2.0/diana/EntryChangeEvent.class act-2.0/diana/OptionChangeEvent.class act-2.0/diana/ExternalProgram.class act-2.0/diana/ExternalProgramException.class act-2.0/diana/EntryGroup.class act-2.0/diana/EntryVector.class act-2.0/diana/EntryGroupChangeListener.class act-2.0/diana/ActionVector.class act-2.0/diana/ActionController.class act-2.0/diana/Action.class act-2.0/diana/EntryGroupChangeEvent.class act-2.0/diana/ChangeEventVector.class act-2.0/diana/Selection.class act-2.0/diana/ComparisonData.class act-2.0/diana/AlignMatch.class act-2.0/diana/SimpleEntryGroup.class act-2.0/diana/SimpleEntryGroup$FeatureEnumerator.class act-2.0/diana/ComparisonDataFactory.class act-2.0/diana/GotoEventSource.class act-2.0/diana/GotoListener.class act-2.0/diana/SelectionChangeListener.class act-2.0/diana/AlignMatchVector.class act-2.0/diana/AlignmentSelectionChangeListener.class act-2.0/diana/SelectionChangeEvent.class act-2.0/diana/GotoEvent.class act-2.0/diana/AlignmentSelectionChangeEvent.class act-2.0/diana/FeaturePredicate.class act-2.0/diana/FeatureKeyQualifierPredicate.class act-2.0/diana/ExternalSearchProgram.class act-2.0/diana/ExternalApplication.class act-2.0/diana/SimpleComparisonData.class act-2.0/diana/MSPcrunchComparisonData.class act-2.0/diana/SSAHAComparisonData.class act-2.0/diana/BlastM8ComparisonData.class act-2.0/diana/MegaBlastComparisonData.class act-2.0/diana/SimpleGotoEventSource.class act-2.0/diana/FeatureKeyPredicate.class act-2.0/diana/ComparisonDataParseException.class act-2.0/diana/FilteredEntryGroup.class act-2.0/diana/FilteredEntryGroup$1.class act-2.0/diana/FilteredEntryGroup$2.class act-2.0/diana/FilteredEntryGroup$3.class act-2.0/diana/FilteredEntryGroup$FeatureEnumerator.class act-2.0/diana/FeatureFromVectorPredicate.class act-2.0/diana/FeaturePatternPredicate.class act-2.0/diana/FeaturePredicateConjunction.class act-2.0/corba/CVS/Root act-2.0/corba/CVS/Repository act-2.0/corba/CVS/Entries act-2.0/corba/apollo.idl act-2.0/corba/ensembl.idl act-2.0/corba/nsdb.idl act-2.0/corba/nsdb_write.idl act-2.0/corba/seqdb.idl act-2.0/corba/types.idl act-2.0/etc/CVS/Root act-2.0/etc/CVS/Repository act-2.0/etc/CVS/Entries act-2.0/etc/af063097.embl act-2.0/etc/af063097.fasta act-2.0/etc/af063097_v_b132222.crunch act-2.0/etc/b132222.embl act-2.0/etc/b132222.fasta act-2.0/etc/c1215.blastn.crunch act-2.0/etc/c1215.blastn.tab act-2.0/etc/c1215.embl act-2.0/etc/c1215.genbank act-2.0/etc/c1215.seq act-2.0/etc/feature_keys act-2.0/etc/options act-2.0/etc/pombe.usage act-2.0/etc/qualifier_types act-2.0/etc/results_to_netscape act-2.0/etc/run_blast act-2.0/etc/run_blastn act-2.0/etc/run_blastp act-2.0/etc/run_blastx act-2.0/etc/run_fasta act-2.0/etc/run_hth act-2.0/etc/run_jalview act-2.0/etc/run_pepstats act-2.0/etc/run_sigcleave act-2.0/etc/run_smart act-2.0/etc/run_tblastn act-2.0/etc/run_tblastx act-2.0/uk/CVS/Root act-2.0/uk/CVS/Repository act-2.0/uk/CVS/Entries act-2.0/uk/ac/CVS/Root act-2.0/uk/ac/CVS/Repository act-2.0/uk/ac/CVS/Entries act-2.0/uk/ac/sanger/CVS/Root act-2.0/uk/ac/sanger/CVS/Repository act-2.0/uk/ac/sanger/CVS/Entries act-2.0/uk/ac/sanger/pathogens/CVS/Root act-2.0/uk/ac/sanger/pathogens/CVS/Repository act-2.0/uk/ac/sanger/pathogens/CVS/Entries act-2.0/uk/ac/sanger/pathogens/Document.java act-2.0/uk/ac/sanger/pathogens/FastVector.java act-2.0/uk/ac/sanger/pathogens/FileDocument.java act-2.0/uk/ac/sanger/pathogens/FileProgressDocument.java act-2.0/uk/ac/sanger/pathogens/InputStreamProgressEvent.java act-2.0/uk/ac/sanger/pathogens/InputStreamProgressListener.java act-2.0/uk/ac/sanger/pathogens/InputStreamProgressListenerVector.java act-2.0/uk/ac/sanger/pathogens/OutOfRangeException.java act-2.0/uk/ac/sanger/pathogens/ProgressInputStream.java act-2.0/uk/ac/sanger/pathogens/ReadOnlyException.java act-2.0/uk/ac/sanger/pathogens/embl/CVS/Root act-2.0/uk/ac/sanger/pathogens/embl/CVS/Repository act-2.0/uk/ac/sanger/pathogens/embl/CVS/Entries act-2.0/uk/ac/sanger/pathogens/embl/BetweenRange.java act-2.0/uk/ac/sanger/pathogens/embl/BioJavaEntry.java act-2.0/uk/ac/sanger/pathogens/embl/BioJavaFeature.java act-2.0/uk/ac/sanger/pathogens/embl/BioJavaSequence.java act-2.0/uk/ac/sanger/pathogens/embl/BlastDocumentEntry.java act-2.0/uk/ac/sanger/pathogens/embl/BlastEntryInformation.java act-2.0/uk/ac/sanger/pathogens/embl/BlastStreamFeature.java act-2.0/uk/ac/sanger/pathogens/embl/ComparableFeature.java act-2.0/uk/ac/sanger/pathogens/embl/CorbaEntry.java act-2.0/uk/ac/sanger/pathogens/embl/CorbaFeature.java act-2.0/uk/ac/sanger/pathogens/embl/CorbaSequence.java act-2.0/uk/ac/sanger/pathogens/embl/DocumentEntry.java act-2.0/uk/ac/sanger/pathogens/embl/DateStampFeature.java act-2.0/uk/ac/sanger/pathogens/embl/DocumentEntryAutosaveThread.java act-2.0/uk/ac/sanger/pathogens/embl/DocumentEntryFactory.java act-2.0/uk/ac/sanger/pathogens/embl/DocumentFeature.java act-2.0/uk/ac/sanger/pathogens/embl/EMBLObject.java act-2.0/uk/ac/sanger/pathogens/embl/EmblDocumentEntry.java act-2.0/uk/ac/sanger/pathogens/embl/EmblMisc.java act-2.0/uk/ac/sanger/pathogens/embl/EmblStreamFeature.java act-2.0/uk/ac/sanger/pathogens/embl/EmblStreamSequence.java act-2.0/uk/ac/sanger/pathogens/embl/EnsemblCorbaEntry.java act-2.0/uk/ac/sanger/pathogens/embl/EnsemblCorbaFeature.java act-2.0/uk/ac/sanger/pathogens/embl/EnsemblCorbaSequence.java act-2.0/uk/ac/sanger/pathogens/embl/Entry.java act-2.0/uk/ac/sanger/pathogens/embl/EntryInformation.java act-2.0/uk/ac/sanger/pathogens/embl/EntryInformationException.java act-2.0/uk/ac/sanger/pathogens/embl/FastaStreamSequence.java act-2.0/uk/ac/sanger/pathogens/embl/Feature.java act-2.0/uk/ac/sanger/pathogens/embl/FeatureComparator.java act-2.0/uk/ac/sanger/pathogens/embl/FeatureEnumeration.java act-2.0/uk/ac/sanger/pathogens/embl/FeatureHeader.java act-2.0/uk/ac/sanger/pathogens/embl/FeatureTable.java act-2.0/uk/ac/sanger/pathogens/embl/FeatureTree.java act-2.0/uk/ac/sanger/pathogens/embl/FeatureVector.java act-2.0/uk/ac/sanger/pathogens/embl/FuzzyRange.java act-2.0/uk/ac/sanger/pathogens/embl/GFFDocumentEntry.java act-2.0/uk/ac/sanger/pathogens/embl/GFFEntryInformation.java act-2.0/uk/ac/sanger/pathogens/embl/GFFMisc.java act-2.0/uk/ac/sanger/pathogens/embl/GFFStreamFeature.java act-2.0/uk/ac/sanger/pathogens/embl/GenbankDocumentEntry.java act-2.0/uk/ac/sanger/pathogens/embl/GenbankMisc.java act-2.0/uk/ac/sanger/pathogens/embl/GenbankStreamFeature.java act-2.0/uk/ac/sanger/pathogens/embl/GenbankStreamSequence.java act-2.0/uk/ac/sanger/pathogens/embl/InvalidKeyException.java act-2.0/uk/ac/sanger/pathogens/embl/InvalidQualifierException.java act-2.0/uk/ac/sanger/pathogens/embl/InvalidRelationException.java act-2.0/uk/ac/sanger/pathogens/embl/Key.java act-2.0/uk/ac/sanger/pathogens/embl/KeyVector.java act-2.0/uk/ac/sanger/pathogens/embl/Range.java act-2.0/uk/ac/sanger/pathogens/embl/LineGroup.java act-2.0/uk/ac/sanger/pathogens/embl/LineGroupVector.java act-2.0/uk/ac/sanger/pathogens/embl/LinePushBackReader.java act-2.0/uk/ac/sanger/pathogens/embl/Location.java act-2.0/uk/ac/sanger/pathogens/embl/LocationLexer.java act-2.0/uk/ac/sanger/pathogens/embl/LocationParseException.java act-2.0/uk/ac/sanger/pathogens/embl/LocationParseNode.java act-2.0/uk/ac/sanger/pathogens/embl/LocationParseNodeVector.java act-2.0/uk/ac/sanger/pathogens/embl/LowerInteger.java act-2.0/uk/ac/sanger/pathogens/embl/MSPcrunchDocumentEntry.java act-2.0/uk/ac/sanger/pathogens/embl/MSPcrunchEntryInformation.java act-2.0/uk/ac/sanger/pathogens/embl/MSPcrunchStreamFeature.java act-2.0/uk/ac/sanger/pathogens/embl/Key.class act-2.0/uk/ac/sanger/pathogens/embl/MiscLineGroup.java act-2.0/uk/ac/sanger/pathogens/embl/OutOfDateException.java act-2.0/uk/ac/sanger/pathogens/embl/PublicDBDocumentEntry.java act-2.0/uk/ac/sanger/pathogens/embl/PublicDBStreamFeature.java act-2.0/uk/ac/sanger/pathogens/embl/PushBackException.java act-2.0/uk/ac/sanger/pathogens/embl/Qualifier.java act-2.0/uk/ac/sanger/pathogens/embl/QualifierInfo.java act-2.0/uk/ac/sanger/pathogens/embl/QualifierInfoException.java act-2.0/uk/ac/sanger/pathogens/embl/QualifierInfoVector.java act-2.0/uk/ac/sanger/pathogens/embl/QualifierParseException.java act-2.0/uk/ac/sanger/pathogens/embl/QualifierVector.java act-2.0/uk/ac/sanger/pathogens/embl/RWCorbaEntry.java act-2.0/uk/ac/sanger/pathogens/embl/Entry.class act-2.0/uk/ac/sanger/pathogens/embl/RWCorbaFeature.java act-2.0/uk/ac/sanger/pathogens/embl/RangeVector.java act-2.0/uk/ac/sanger/pathogens/embl/RawStreamSequence.java act-2.0/uk/ac/sanger/pathogens/embl/ReadFormatException.java act-2.0/uk/ac/sanger/pathogens/embl/ReadOnlyEmblStreamFeature.java act-2.0/uk/ac/sanger/pathogens/embl/ReadOnlyEntry.java act-2.0/uk/ac/sanger/pathogens/embl/Sequence.java act-2.0/uk/ac/sanger/pathogens/embl/SimpleDocumentEntry.java act-2.0/uk/ac/sanger/pathogens/embl/SimpleDocumentFeature.java act-2.0/uk/ac/sanger/pathogens/embl/SimpleEntryInformation.java act-2.0/uk/ac/sanger/pathogens/embl/StreamFeature.java act-2.0/uk/ac/sanger/pathogens/embl/StreamFeatureTable.java act-2.0/uk/ac/sanger/pathogens/embl/KeyVector.class act-2.0/uk/ac/sanger/pathogens/embl/StreamQualifier.java act-2.0/uk/ac/sanger/pathogens/embl/StreamSequence.java act-2.0/uk/ac/sanger/pathogens/embl/StreamSequenceFactory.java act-2.0/uk/ac/sanger/pathogens/embl/UpperInteger.java act-2.0/uk/ac/sanger/pathogens/embl/DocumentEntryFactory.class act-2.0/uk/ac/sanger/pathogens/embl/ReadFormatException.class act-2.0/uk/ac/sanger/pathogens/embl/EntryInformation.class act-2.0/uk/ac/sanger/pathogens/embl/EntryInformationException.class act-2.0/uk/ac/sanger/pathogens/embl/InvalidRelationException.class act-2.0/uk/ac/sanger/pathogens/embl/QualifierInfoException.class act-2.0/uk/ac/sanger/pathogens/embl/QualifierInfoVector.class act-2.0/uk/ac/sanger/pathogens/embl/QualifierInfo.class act-2.0/uk/ac/sanger/pathogens/embl/Qualifier.class act-2.0/uk/ac/sanger/pathogens/embl/DocumentEntry.class act-2.0/uk/ac/sanger/pathogens/embl/Sequence.class act-2.0/uk/ac/sanger/pathogens/embl/Range.class act-2.0/uk/ac/sanger/pathogens/embl/FeatureVector.class act-2.0/uk/ac/sanger/pathogens/embl/FeatureEnumeration.class act-2.0/uk/ac/sanger/pathogens/embl/QualifierVector.class act-2.0/uk/ac/sanger/pathogens/embl/LocationLexer.class act-2.0/uk/ac/sanger/pathogens/embl/LocationLexer$TokenEnumeration.class act-2.0/uk/ac/sanger/pathogens/embl/Location.class act-2.0/uk/ac/sanger/pathogens/embl/Feature.class act-2.0/uk/ac/sanger/pathogens/embl/EMBLObject.class act-2.0/uk/ac/sanger/pathogens/embl/LocationParseNode.class act-2.0/uk/ac/sanger/pathogens/embl/LineGroup.class act-2.0/uk/ac/sanger/pathogens/embl/RangeVector.class act-2.0/uk/ac/sanger/pathogens/embl/LocationParseException.class act-2.0/uk/ac/sanger/pathogens/embl/LocationParseNodeVector.class act-2.0/uk/ac/sanger/pathogens/embl/SimpleEntryInformation.class act-2.0/uk/ac/sanger/pathogens/embl/SimpleDocumentEntry.class act-2.0/uk/ac/sanger/pathogens/embl/SimpleDocumentEntry$1.class act-2.0/uk/ac/sanger/pathogens/embl/PublicDBDocumentEntry.class act-2.0/uk/ac/sanger/pathogens/embl/EmblDocumentEntry.class act-2.0/uk/ac/sanger/pathogens/embl/LineGroupVector.class act-2.0/uk/ac/sanger/pathogens/embl/SimpleDocumentFeature.class act-2.0/uk/ac/sanger/pathogens/embl/StreamSequence.class act-2.0/uk/ac/sanger/pathogens/embl/FeatureTable.class act-2.0/uk/ac/sanger/pathogens/embl/FeatureTree.class act-2.0/uk/ac/sanger/pathogens/embl/FeatureTree$FeatureEnumerator.class act-2.0/uk/ac/sanger/pathogens/embl/LinePushBackReader.class act-2.0/uk/ac/sanger/pathogens/embl/PushBackException.class act-2.0/uk/ac/sanger/pathogens/embl/GFFDocumentEntry.class act-2.0/uk/ac/sanger/pathogens/embl/MSPcrunchDocumentEntry.class act-2.0/uk/ac/sanger/pathogens/embl/BlastDocumentEntry.class act-2.0/uk/ac/sanger/pathogens/embl/GenbankDocumentEntry.class act-2.0/uk/ac/sanger/pathogens/embl/EmblStreamSequence.class act-2.0/uk/ac/sanger/pathogens/embl/InvalidKeyException.class act-2.0/uk/ac/sanger/pathogens/embl/ComparableFeature.class act-2.0/uk/ac/sanger/pathogens/embl/StreamFeature.class act-2.0/uk/ac/sanger/pathogens/embl/DocumentFeature.class act-2.0/uk/ac/sanger/pathogens/embl/PublicDBStreamFeature.class act-2.0/uk/ac/sanger/pathogens/embl/FuzzyRange.class act-2.0/uk/ac/sanger/pathogens/embl/EmblStreamFeature.class act-2.0/uk/ac/sanger/pathogens/embl/QualifierParseException.class act-2.0/uk/ac/sanger/pathogens/embl/RawStreamSequence.class act-2.0/uk/ac/sanger/pathogens/embl/FastaStreamSequence.class act-2.0/uk/ac/sanger/pathogens/embl/DateStampFeature.class act-2.0/uk/ac/sanger/pathogens/embl/OutOfDateException.class act-2.0/uk/ac/sanger/pathogens/embl/LowerInteger.class act-2.0/uk/ac/sanger/pathogens/embl/UpperInteger.class act-2.0/uk/ac/sanger/pathogens/embl/BetweenRange.class act-2.0/uk/ac/sanger/pathogens/embl/ReadOnlyEmblStreamFeature.class act-2.0/uk/ac/sanger/pathogens/embl/MiscLineGroup.class act-2.0/uk/ac/sanger/pathogens/embl/GenbankStreamFeature.class act-2.0/uk/ac/sanger/pathogens/embl/EmblMisc.class act-2.0/uk/ac/sanger/pathogens/embl/FeatureHeader.class act-2.0/uk/ac/sanger/pathogens/embl/StreamFeatureTable.class act-2.0/uk/ac/sanger/pathogens/embl/GenbankMisc.class act-2.0/uk/ac/sanger/pathogens/embl/DocumentEntryAutosaveThread.class act-2.0/uk/ac/sanger/pathogens/embl/GenbankStreamSequence.class act-2.0/uk/ac/sanger/pathogens/embl/StreamSequenceFactory.class act-2.0/uk/ac/sanger/pathogens/embl/GFFStreamFeature.class act-2.0/uk/ac/sanger/pathogens/embl/BlastStreamFeature.class act-2.0/uk/ac/sanger/pathogens/embl/MSPcrunchStreamFeature.class act-2.0/uk/ac/sanger/pathogens/embl/GFFMisc.class act-2.0/uk/ac/sanger/pathogens/embl/FeatureComparator.class act-2.0/uk/ac/sanger/pathogens/embl/GFFEntryInformation.class act-2.0/uk/ac/sanger/pathogens/embl/MSPcrunchEntryInformation.class act-2.0/uk/ac/sanger/pathogens/embl/BlastEntryInformation.class act-2.0/uk/ac/sanger/pathogens/embl/InvalidQualifierException.class act-2.0/uk/ac/sanger/pathogens/embl/StreamQualifier.class act-2.0/uk/ac/sanger/pathogens/embl/ReadOnlyEntry.class act-2.0/uk/ac/sanger/pathogens/embl/CorbaEntry.class act-2.0/uk/ac/sanger/pathogens/embl/CorbaSequence.class act-2.0/uk/ac/sanger/pathogens/embl/NucFeatureHasher.class act-2.0/uk/ac/sanger/pathogens/embl/RWCorbaEntry.class act-2.0/uk/ac/sanger/pathogens/embl/RWCorbaEntry$1.class act-2.0/uk/ac/sanger/pathogens/embl/RWCorbaFeature.class act-2.0/uk/ac/sanger/pathogens/embl/CorbaFeature.class act-2.0/uk/ac/sanger/pathogens/StringVector.java act-2.0/uk/ac/sanger/pathogens/URLDocument.java act-2.0/uk/ac/sanger/pathogens/WorkingGZIPInputStream.java act-2.0/uk/ac/sanger/pathogens/StringVector.class act-2.0/uk/ac/sanger/pathogens/StringVector$1.class act-2.0/uk/ac/sanger/pathogens/Document.class act-2.0/uk/ac/sanger/pathogens/OutOfRangeException.class act-2.0/uk/ac/sanger/pathogens/ReadOnlyException.class act-2.0/uk/ac/sanger/pathogens/InputStreamProgressListener.class act-2.0/uk/ac/sanger/pathogens/InputStreamProgressEvent.class act-2.0/uk/ac/sanger/pathogens/FastVector.class act-2.0/uk/ac/sanger/pathogens/FileDocument.class act-2.0/uk/ac/sanger/pathogens/WorkingGZIPInputStream.class act-2.0/uk/ac/sanger/pathogens/InputStreamProgressListenerVector.class act-2.0/uk/ac/sanger/pathogens/FileProgressDocument.class act-2.0/uk/ac/sanger/pathogens/ProgressInputStream.class act-2.0/lib/CVS/Root act-2.0/lib/CVS/Repository act-2.0/lib/CVS/Entries act-2.0/lib/JacORB.jar act-2.0/collections/CVS/Root act-2.0/collections/CVS/Repository act-2.0/collections/CVS/Entries act-2.0/collections/ArrayEnumeration.java act-2.0/collections/Assertable.java act-2.0/collections/Bag.java act-2.0/collections/BinaryFunction.java act-2.0/collections/CEImpl.java act-2.0/collections/CLCell.java act-2.0/collections/CLEnumeration.java act-2.0/collections/Cell.java act-2.0/collections/CheckedBag.java act-2.0/collections/CheckedCollection.java act-2.0/collections/CheckedMap.java act-2.0/collections/CheckedSeq.java act-2.0/collections/CheckedSet.java act-2.0/collections/Keyed.java act-2.0/collections/CircularList.java act-2.0/collections/Collection.java act-2.0/collections/CollectionEnumeration.java act-2.0/collections/Comparator.java act-2.0/collections/Dynarray.java act-2.0/collections/CorruptedEnumerationException.java act-2.0/collections/DAEnumeration.java act-2.0/collections/DefaultComparator.java act-2.0/collections/DefaultImplementations.java act-2.0/collections/ElementSortedCollection.java act-2.0/collections/FilteringEnumeration.java act-2.0/collections/Function.java act-2.0/collections/HTEnumeration.java act-2.0/collections/HTPairEnumeration.java act-2.0/collections/HashTableParams.java act-2.0/collections/HashedMap.java act-2.0/collections/HashedSet.java act-2.0/collections/IllegalElementException.java act-2.0/collections/Immutable.java act-2.0/collections/ImplementationCheckable.java act-2.0/collections/IncrBag.java act-2.0/collections/ImplementationError.java act-2.0/collections/IncrCollectionEnumeration.java act-2.0/collections/IncrImpl.java act-2.0/collections/IncrMap.java act-2.0/collections/IncrSeq.java act-2.0/collections/IncrSet.java act-2.0/collections/InterleavingEnumeration.java act-2.0/collections/KeySortedCollection.java act-2.0/collections/LBEnumeration.java act-2.0/collections/LLCell.java act-2.0/collections/LLCellEnumeration.java act-2.0/collections/LLMap.java act-2.0/collections/LLPair.java act-2.0/collections/LLPairEnumeration.java act-2.0/collections/LinkedBuffer.java act-2.0/collections/LinkedList.java act-2.0/collections/Map.java act-2.0/collections/MappingEnumeration.java act-2.0/collections/Pair.java act-2.0/collections/Predicate.java act-2.0/collections/Procedure.java act-2.0/collections/RBCell.java act-2.0/collections/RBCellEnumeration.java act-2.0/collections/RBMap.java act-2.0/collections/RBPair.java act-2.0/collections/RBPairEnumeration.java act-2.0/collections/RBTree.java act-2.0/collections/Seq.java act-2.0/collections/Set.java act-2.0/collections/SimpleTest.java act-2.0/collections/SortableCollection.java act-2.0/collections/UpdatableBag.java act-2.0/collections/UpdatableBagImpl.java act-2.0/collections/UpdatableCollection.java act-2.0/collections/UpdatableImpl.java act-2.0/collections/UpdatableMap.java act-2.0/collections/UpdatableMapImpl.java act-2.0/collections/javaMake act-2.0/collections/UpdatableSeq.java act-2.0/collections/UpdatableSeqImpl.java act-2.0/collections/UpdatableSet.java act-2.0/collections/UpdatableSetImpl.java act-2.0/collections/collections_Dynarray.h act-2.0/collections/Comparator.class act-2.0/collections/Assertable.class act-2.0/collections/ImplementationCheckable.class act-2.0/collections/Collection.class act-2.0/collections/Seq.class act-2.0/collections/UpdatableCollection.class act-2.0/collections/SortableCollection.class act-2.0/collections/UpdatableSeq.class act-2.0/collections/UpdatableImpl.class act-2.0/collections/UpdatableSeqImpl.class act-2.0/collections/Dynarray.class act-2.0/collections/Map.class act-2.0/collections/Predicate.class act-2.0/collections/CorruptedEnumerationException.class act-2.0/collections/IllegalElementException.class act-2.0/collections/CollectionEnumeration.class act-2.0/collections/ImplementationError.class act-2.0/collections/ElementSortedCollection.class act-2.0/collections/Bag.class act-2.0/collections/UpdatableBag.class act-2.0/collections/UpdatableBagImpl.class act-2.0/collections/RBTree.class act-2.0/collections/Cell.class act-2.0/collections/RBCell.class act-2.0/collections/KeySortedCollection.class act-2.0/collections/Set.class act-2.0/collections/CEImpl.class act-2.0/collections/DAEnumeration.class act-2.0/collections/DefaultComparator.class act-2.0/collections/RBCellEnumeration.class act-2.0/collections/Keyed.class act-2.0/type/stringListHolder.java act-2.0/type/stringListHelper.java act-2.0/type/longListHolder.java act-2.0/type/longListHelper.java act-2.0/type/ulongListHolder.java act-2.0/type/ulongListHelper.java act-2.0/type/NoResult.java act-2.0/type/NoResultHolder.java act-2.0/type/NoResultHelper.java act-2.0/type/NoWritePermission.java act-2.0/type/NoWritePermissionHolder.java act-2.0/type/NoWritePermissionHelper.java act-2.0/type/InvalidRelation.java act-2.0/type/InvalidRelationHolder.java act-2.0/type/InvalidRelationHelper.java act-2.0/type/IndexOutOfRange.java act-2.0/type/IndexOutOfRangeHolder.java act-2.0/type/IndexOutOfRangeHelper.java act-2.0/type/InvalidArgumentValue.java act-2.0/type/InvalidArgumentValueHolder.java act-2.0/type/InvalidArgumentValueHelper.java act-2.0/type/ParseError.java act-2.0/type/ParseErrorHolder.java act-2.0/type/ParseErrorHelper.java act-2.0/type/Date.java act-2.0/type/DateHolder.java act-2.0/type/DateHelper.java act-2.0/type/DateListHolder.java act-2.0/type/DateListHelper.java act-2.0/type/Person.java act-2.0/type/PersonHolder.java act-2.0/type/PersonHelper.java act-2.0/type/PersonListHolder.java act-2.0/type/PersonListHelper.java act-2.0/type/Revision.java act-2.0/type/RevisionHolder.java act-2.0/type/RevisionHelper.java act-2.0/type/RevisionListHolder.java act-2.0/type/RevisionListHelper.java act-2.0/type/DbXref.java act-2.0/type/DbXrefHolder.java act-2.0/type/DbXrefHelper.java act-2.0/type/DbXrefListHolder.java act-2.0/type/DbXrefListHelper.java act-2.0/type/AminoAcid.java act-2.0/type/AminoAcidHolder.java act-2.0/type/AminoAcidHelper.java act-2.0/type/AminoAcidListHolder.java act-2.0/type/AminoAcidListHelper.java act-2.0/type/CodonTranslation.java act-2.0/type/CodonTranslationHolder.java act-2.0/type/CodonTranslationHelper.java act-2.0/type/CodonTranslationListHolder.java act-2.0/type/CodonTranslationListHelper.java act-2.0/type/AntiCodon.java act-2.0/type/AntiCodonHolder.java act-2.0/type/AntiCodonHelper.java act-2.0/type/AntiCodonListHolder.java act-2.0/type/AntiCodonListHelper.java act-2.0/type/TranslationException.java act-2.0/type/TranslationExceptionHolder.java act-2.0/type/TranslationExceptionHelper.java act-2.0/type/RepeatUnit.java act-2.0/type/Exact_ftc.java act-2.0/type/TranslationExceptionListHolder.java act-2.0/type/TranslationExceptionListHelper.java act-2.0/type/SpliceConsensus.java act-2.0/type/SpliceConsensusHolder.java act-2.0/type/SpliceConsensusHelper.java act-2.0/type/SpliceConsensusListHolder.java act-2.0/type/SpliceConsensusListHelper.java act-2.0/type/RepeatUnitHolder.java act-2.0/type/RepeatUnitHelper.java act-2.0/type/RepeatUnitListHolder.java act-2.0/type/RepeatUnitListHelper.java act-2.0/type/FuzzyTypeCodeHelper.java act-2.0/type/In_ftc.java act-2.0/type/Between_ftc.java act-2.0/type/Fuzzy.java act-2.0/type/Less_ftc.java act-2.0/type/Greater_ftc.java act-2.0/type/FuzzyHolder.java act-2.0/type/FuzzyHelper.java act-2.0/type/FuzzyListHolder.java act-2.0/type/FuzzyListHelper.java act-2.0/type/NoResult.class act-2.0/type/IndexOutOfRange.class act-2.0/type/InvalidArgumentValue.class act-2.0/type/InvalidRelation.class act-2.0/type/DbXref.class act-2.0/type/Revision.class act-2.0/type/Date.class act-2.0/type/Fuzzy.class act-2.0/type/TranslationException.class act-2.0/type/CodonTranslation.class act-2.0/type/AntiCodon.class act-2.0/type/SpliceConsensus.class act-2.0/type/RepeatUnit.class act-2.0/type/AminoAcid.class act-2.0/type/IndexOutOfRangeHelper.class act-2.0/type/InvalidArgumentValueHelper.class act-2.0/type/InvalidRelationHelper.class act-2.0/type/stringListHelper.class act-2.0/type/NoResultHelper.class act-2.0/type/DbXrefListHelper.class act-2.0/type/RevisionListHelper.class act-2.0/type/DbXrefHelper.class act-2.0/type/RevisionHelper.class act-2.0/type/DateHelper.class act-2.0/type/RepeatUnitHelper.class act-2.0/type/SpliceConsensusHelper.class act-2.0/type/AntiCodonHelper.class act-2.0/type/CodonTranslationHelper.class act-2.0/type/TranslationExceptionHelper.class act-2.0/type/AminoAcidHelper.class act-2.0/type/FuzzyHelper.class act-2.0/nsdb/NucSeqListHolder.java act-2.0/nsdb/NucSeqListHelper.java act-2.0/nsdb/NucFeatureListHolder.java act-2.0/nsdb/NucFeatureListHelper.java act-2.0/nsdb/LocationListHolder.java act-2.0/nsdb/LocationListHelper.java act-2.0/nsdb/FeatureLocationListHolder.java act-2.0/nsdb/FeatureLocationListHelper.java act-2.0/nsdb/EntryInfoListHolder.java act-2.0/nsdb/EntryInfoListHelper.java act-2.0/nsdb/InexactLocation.java act-2.0/nsdb/InexactLocationHolder.java act-2.0/nsdb/InexactLocationHelper.java act-2.0/nsdb/EntryInfo.java act-2.0/nsdb/EntryInfoOperations.java act-2.0/nsdb/EntryInfoHelper.java act-2.0/nsdb/EntryInfoHolder.java act-2.0/nsdb/_EntryInfoStub.java act-2.0/nsdb/EntryInfoPOA.java act-2.0/nsdb/EntryInfoPOATie.java act-2.0/nsdb/Location.java act-2.0/nsdb/LocationOperations.java act-2.0/nsdb/LocationHelper.java act-2.0/nsdb/LocationHolder.java act-2.0/nsdb/_LocationStub.java act-2.0/nsdb/LocationPOA.java act-2.0/nsdb/LocationPOATie.java act-2.0/nsdb/LocationPackage/IdListHolder.java act-2.0/nsdb/LocationPackage/IdListHelper.java act-2.0/nsdb/LocationPackage/LocNodeTypeCodeHelper.java act-2.0/nsdb/LocationPackage/LocVirtualSegment.java act-2.0/nsdb/LocationPackage/LocVirtualSegmentHolder.java act-2.0/nsdb/LocationPackage/LocVirtualSegmentHelper.java act-2.0/nsdb/LocationPackage/LocGapHolder.java act-2.0/nsdb/LocationPackage/LocGapHelper.java act-2.0/nsdb/LocationPackage/LocPhysicalSegmentHolder.java act-2.0/nsdb/LocationPackage/LocPhysicalSegmentHelper.java act-2.0/nsdb/LocationPackage/LocOperator.java act-2.0/nsdb/LocationPackage/LocOperatorHolder.java act-2.0/nsdb/LocationPackage/LocOperatorHelper.java act-2.0/nsdb/LocationPackage/LocationNode_u.java act-2.0/nsdb/LocationPackage/LocOperator.class act-2.0/nsdb/LocationPackage/LocationNode_uHolder.java act-2.0/nsdb/LocationPackage/LocationNode_uHelper.java act-2.0/nsdb/LocationPackage/LocationNodeListHolder.java act-2.0/nsdb/LocationPackage/LocationNodeListHelper.java act-2.0/nsdb/LocationPackage/LocationNode_u.class act-2.0/nsdb/LocationPackage/LocVirtualSegment.class act-2.0/nsdb/LocationPackage/LocationNodeListHelper.class act-2.0/nsdb/LocationPackage/LocationNode_uHelper.class act-2.0/nsdb/LocationPackage/LocOperatorHelper.class act-2.0/nsdb/LocationPackage/LocGapHelper.class act-2.0/nsdb/LocationPackage/LocPhysicalSegmentHelper.class act-2.0/nsdb/LocationPackage/LocVirtualSegmentHelper.class act-2.0/nsdb/LocationPackage/IdListHelper.class act-2.0/nsdb/FeatureLocation.java act-2.0/nsdb/FeatureLocationOperations.java act-2.0/nsdb/FeatureLocationPOA.java act-2.0/nsdb/FeatureLocationHelper.java act-2.0/nsdb/FeatureLocationHolder.java act-2.0/nsdb/_FeatureLocationStub.java act-2.0/nsdb/FeatureLocationPOATie.java act-2.0/nsdb/NucFeature.java act-2.0/nsdb/NucFeaturePOA.java act-2.0/nsdb/NucFeatureOperations.java act-2.0/nsdb/NucFeatureHelper.java act-2.0/nsdb/NucFeatureHolder.java act-2.0/nsdb/_NucFeatureStub.java act-2.0/nsdb/NucFeaturePOATie.java act-2.0/nsdb/NucFeaturePackage/QualifierTypeCodeHelper.java act-2.0/nsdb/NucFeaturePackage/QualifierValue_u.java act-2.0/nsdb/NucFeaturePackage/QualifierValue_uHolder.java act-2.0/nsdb/NucFeaturePackage/QualifierValue_uHelper.java act-2.0/nsdb/NucFeaturePackage/QualifierValueListHolder.java act-2.0/nsdb/NucFeaturePackage/QualifierValueListHelper.java act-2.0/nsdb/NucFeaturePackage/Qualifier.java act-2.0/nsdb/NucFeaturePackage/QualifierHolder.java act-2.0/nsdb/NucFeaturePackage/QualifierHelper.java act-2.0/nsdb/NucFeaturePackage/QualifierListHolder.java act-2.0/nsdb/NucFeaturePackage/QualifierListHelper.java act-2.0/nsdb/NucFeaturePackage/Qualifier.class act-2.0/nsdb/NucFeaturePackage/QualifierValue_u.class act-2.0/nsdb/NucFeaturePackage/QualifierListHelper.class act-2.0/nsdb/NucFeaturePackage/QualifierHelper.class act-2.0/nsdb/NucFeaturePackage/QualifierValue_uHelper.class act-2.0/nsdb/NucFeaturePackage/QualifierValueListHelper.class act-2.0/nsdb/NucSeq.java act-2.0/nsdb/NucSeqOperations.java act-2.0/nsdb/NucSeqHelper.java act-2.0/nsdb/NucSeqHolder.java act-2.0/nsdb/_NucSeqStub.java act-2.0/nsdb/NucSeqPOA.java act-2.0/nsdb/NucSeqPOATie.java act-2.0/nsdb/Embl.java act-2.0/nsdb/EmblSeq.java act-2.0/nsdb/EmblSeqOperations.java act-2.0/nsdb/EmblSeqHelper.java act-2.0/nsdb/EmblSeqHolder.java act-2.0/nsdb/_EmblSeqStub.java act-2.0/nsdb/EmblSeqPOA.java act-2.0/nsdb/EmblSeqPOATie.java act-2.0/nsdb/EmblOperations.java act-2.0/nsdb/EmblHelper.java act-2.0/nsdb/EmblHolder.java act-2.0/nsdb/_EmblStub.java act-2.0/nsdb/EmblPOA.java act-2.0/nsdb/EmblPOATie.java act-2.0/nsdb/EmblPackage/Superceded.java act-2.0/nsdb/EmblPackage/SupercededHolder.java act-2.0/nsdb/EmblPackage/SupercededHelper.java act-2.0/nsdb/EmblPackage/Superceded.class act-2.0/nsdb/EmblPackage/SupercededHelper.class act-2.0/nsdb/OutOfDate.java act-2.0/nsdb/LocationParse.java act-2.0/nsdb/OutOfDateHolder.java act-2.0/nsdb/OutOfDateHelper.java act-2.0/nsdb/ReadOnlyException.java act-2.0/nsdb/ReadOnlyExceptionHolder.java act-2.0/nsdb/ReadOnlyExceptionHelper.java act-2.0/nsdb/LocationParseHolder.java act-2.0/nsdb/LocationParseHelper.java act-2.0/nsdb/QualifierParse.java act-2.0/nsdb/QualifierParseHolder.java act-2.0/nsdb/QualifierParseHelper.java act-2.0/nsdb/InvalidQualifier.java act-2.0/nsdb/InvalidQualifierHolder.java act-2.0/nsdb/InvalidQualifierHelper.java act-2.0/nsdb/NucFeatureWriterListHolder.java act-2.0/nsdb/Embl.class act-2.0/nsdb/NucFeatureWriterListHelper.java act-2.0/nsdb/datestamp_tHelper.java act-2.0/nsdb/Datestamp.java act-2.0/nsdb/DatestampHolder.java act-2.0/nsdb/DatestampHelper.java act-2.0/nsdb/EntryStats.java act-2.0/nsdb/EntryStatsHolder.java act-2.0/nsdb/EntryStatsHelper.java act-2.0/nsdb/ServerInfo.java act-2.0/nsdb/EmblWriter.java act-2.0/nsdb/ServerInfoHolder.java act-2.0/nsdb/ServerInfoHelper.java act-2.0/nsdb/EmblWriterOperations.java act-2.0/nsdb/EmblWriterHelper.java act-2.0/nsdb/EmblWriterHolder.java act-2.0/nsdb/_EmblWriterStub.java act-2.0/nsdb/EmblWriterPOA.java act-2.0/nsdb/EmblWriterPOATie.java act-2.0/nsdb/InvalidKey.java act-2.0/nsdb/InvalidKeyHolder.java act-2.0/nsdb/InvalidKeyHelper.java act-2.0/nsdb/CommitFailed.java act-2.0/nsdb/CommitFailedHolder.java act-2.0/nsdb/CommitFailedHelper.java act-2.0/nsdb/EmblSeqWriter.java act-2.0/nsdb/EmblSeqWriterOperations.java act-2.0/nsdb/EmblSeqWriterHelper.java act-2.0/nsdb/EmblSeqWriterHolder.java act-2.0/nsdb/_EmblSeqWriterStub.java act-2.0/nsdb/EmblSeqWriterPOA.java act-2.0/nsdb/EmblSeqWriterPOATie.java act-2.0/nsdb/NucFeatureWriter.java act-2.0/nsdb/NucFeatureWriterOperations.java act-2.0/nsdb/NucFeatureWriterHelper.java act-2.0/nsdb/NucFeatureWriterHolder.java act-2.0/nsdb/_NucFeatureWriterStub.java act-2.0/nsdb/NucFeatureWriterPOA.java act-2.0/nsdb/NucFeatureWriterPOATie.java act-2.0/nsdb/EntryInfoOperations.class act-2.0/nsdb/EntryInfo.class act-2.0/nsdb/NucSeqOperations.class act-2.0/nsdb/NucSeq.class act-2.0/nsdb/EmblSeqOperations.class act-2.0/nsdb/EmblSeq.class act-2.0/nsdb/EmblOperations.class act-2.0/nsdb/InexactLocation.class act-2.0/nsdb/LocationOperations.class act-2.0/nsdb/Location.class act-2.0/nsdb/NucFeatureOperations.class act-2.0/nsdb/NucFeature.class act-2.0/nsdb/FeatureLocationOperations.class act-2.0/nsdb/FeatureLocation.class act-2.0/nsdb/EntryStats.class act-2.0/nsdb/ServerInfo.class act-2.0/nsdb/EmblWriterOperations.class act-2.0/nsdb/EmblWriter.class act-2.0/nsdb/EmblSeqWriterOperations.class act-2.0/nsdb/EmblSeqWriter.class act-2.0/nsdb/Datestamp.class act-2.0/nsdb/CommitFailed.class act-2.0/nsdb/ReadOnlyException.class act-2.0/nsdb/InvalidKey.class act-2.0/nsdb/LocationParse.class act-2.0/nsdb/OutOfDate.class act-2.0/nsdb/NucFeatureWriterOperations.class act-2.0/nsdb/NucFeatureWriter.class act-2.0/nsdb/InvalidQualifier.class act-2.0/nsdb/QualifierParse.class act-2.0/nsdb/EmblWriterHelper.class act-2.0/nsdb/EmblHelper.class act-2.0/nsdb/InexactLocationHelper.class act-2.0/nsdb/CommitFailedHelper.class act-2.0/nsdb/_EmblStub.class act-2.0/nsdb/LocationParseHelper.class act-2.0/nsdb/QualifierParseHelper.class act-2.0/nsdb/_EmblWriterStub.class act-2.0/nsdb/EmblSeqWriterHelper.class act-2.0/nsdb/NucFeatureWriterHelper.class act-2.0/nsdb/ServerInfoHelper.class act-2.0/nsdb/EmblSeqHelper.class act-2.0/nsdb/_EmblSeqWriterStub.class act-2.0/nsdb/_NucFeatureWriterStub.class act-2.0/nsdb/EntryStatsHelper.class act-2.0/nsdb/_EmblSeqStub.class act-2.0/nsdb/NucFeatureListHelper.class act-2.0/nsdb/DatestampHelper.class act-2.0/nsdb/NucFeatureHelper.class act-2.0/nsdb/ReadOnlyExceptionHelper.class act-2.0/nsdb/LocationHelper.class act-2.0/nsdb/InvalidKeyHelper.class act-2.0/nsdb/InvalidQualifierHelper.class act-2.0/nsdb/OutOfDateHelper.class act-2.0/nsdb/FeatureLocationHelper.class act-2.0/nsdb/_NucFeatureStub.class act-2.0/nsdb/_LocationStub.class act-2.0/nsdb/_FeatureLocationStub.class act-2.0/seqdb/BioSeq.java act-2.0/seqdb/BioSeqOperations.java act-2.0/seqdb/BioSeqHelper.java act-2.0/seqdb/BioSeqHolder.java act-2.0/seqdb/_BioSeqStub.java act-2.0/seqdb/BioSeqPOA.java act-2.0/seqdb/BioSeqPOATie.java act-2.0/seqdb/Feature.java act-2.0/seqdb/FeatureOperations.java act-2.0/seqdb/FeatureHelper.java act-2.0/seqdb/FeatureHolder.java act-2.0/seqdb/_FeatureStub.java act-2.0/seqdb/FeaturePOA.java act-2.0/seqdb/FeaturePOATie.java act-2.0/seqdb/SeqInfo.java act-2.0/seqdb/SeqInfoOperations.java act-2.0/seqdb/SeqInfoHelper.java act-2.0/seqdb/SeqInfoPOA.java act-2.0/seqdb/SeqInfoHolder.java act-2.0/seqdb/_SeqInfoStub.java act-2.0/seqdb/SeqInfoPOATie.java act-2.0/seqdb/SeqInfoOperations.class act-2.0/seqdb/SeqInfo.class act-2.0/seqdb/BioSeqOperations.class act-2.0/seqdb/BioSeq.class act-2.0/seqdb/FeatureOperations.class act-2.0/seqdb/Feature.class act-2.0/Ensembl/artemis/RequestedSequenceTooLong.java act-2.0/Ensembl/artemis/RequestedSequenceTooLongHolder.java act-2.0/Ensembl/artemis/RequestedSequenceTooLongHelper.java act-2.0/Ensembl/artemis/NoEntry.java act-2.0/Ensembl/artemis/NoEntryHolder.java act-2.0/Ensembl/artemis/NoEntryHelper.java act-2.0/Ensembl/artemis/BioSequence.java act-2.0/Ensembl/artemis/BioSequenceOperations.java act-2.0/Ensembl/artemis/BioSequenceHelper.java act-2.0/Ensembl/artemis/BioSequenceHolder.java act-2.0/Ensembl/artemis/_BioSequenceStub.java act-2.0/Ensembl/artemis/BioSequencePOA.java act-2.0/Ensembl/artemis/BioSequencePOATie.java act-2.0/Ensembl/artemis/Qualifier.java act-2.0/Ensembl/artemis/QualifierHolder.java act-2.0/Ensembl/artemis/QualifierHelper.java act-2.0/Ensembl/artemis/QualifierListHolder.java act-2.0/Ensembl/artemis/QualifierListHelper.java act-2.0/Ensembl/artemis/Feature.java act-2.0/Ensembl/artemis/FeatureOperations.java act-2.0/Ensembl/artemis/FeatureHelper.java act-2.0/Ensembl/artemis/FeatureHolder.java act-2.0/Ensembl/artemis/_FeatureStub.java act-2.0/Ensembl/artemis/FeaturePOA.java act-2.0/Ensembl/artemis/DB.java act-2.0/Ensembl/artemis/FeaturePOATie.java act-2.0/Ensembl/artemis/FeatureListHolder.java act-2.0/Ensembl/artemis/FeatureListHelper.java act-2.0/Ensembl/artemis/Entry.java act-2.0/Ensembl/artemis/EntryOperations.java act-2.0/Ensembl/artemis/EntryHelper.java act-2.0/Ensembl/artemis/EntryHolder.java act-2.0/Ensembl/artemis/_EntryStub.java act-2.0/Ensembl/artemis/EntryPOA.java act-2.0/Ensembl/artemis/EntryPOATie.java act-2.0/Ensembl/artemis/QualifierDefinitionListHolder.java act-2.0/Ensembl/artemis/QualifierDefinitionListHelper.java act-2.0/Ensembl/artemis/FeatureDefinition.java act-2.0/Ensembl/artemis/FeatureDefinitionHolder.java act-2.0/Ensembl/artemis/FeatureDefinitionHelper.java act-2.0/Ensembl/artemis/FeatureDefinitionListHolder.java act-2.0/Ensembl/artemis/FeatureDefinitionListHelper.java act-2.0/Ensembl/artemis/EntryNameListHolder.java act-2.0/Ensembl/artemis/EntryNameListHelper.java act-2.0/Ensembl/artemis/DBOperations.java act-2.0/Ensembl/artemis/DBHelper.java act-2.0/Ensembl/artemis/DBHolder.java act-2.0/Ensembl/artemis/_DBStub.java act-2.0/Ensembl/artemis/DBPOA.java act-2.0/Ensembl/artemis/DBPOATie.java act-2.0/Dad.class act-2.0/AppGlobal.class bin/act @dirrm act-2.0/CVS @dirrm act-2.0/META-INF/CVS @dirrm act-2.0/META-INF @dirrm act-2.0/diana/CVS @dirrm act-2.0/diana/plot/CVS @dirrm act-2.0/diana/plot @dirrm act-2.0/diana/components/CVS @dirrm act-2.0/diana/components @dirrm act-2.0/diana/sequence/CVS @dirrm act-2.0/diana/sequence @dirrm act-2.0/diana @dirrm act-2.0/corba/CVS @dirrm act-2.0/corba @dirrm act-2.0/etc/CVS @dirrm act-2.0/etc @dirrm act-2.0/uk/CVS @dirrm act-2.0/uk/ac/CVS @dirrm act-2.0/uk/ac/sanger/CVS @dirrm act-2.0/uk/ac/sanger/pathogens/CVS @dirrm act-2.0/uk/ac/sanger/pathogens/embl/CVS @dirrm act-2.0/uk/ac/sanger/pathogens/embl @dirrm act-2.0/uk/ac/sanger/pathogens @dirrm act-2.0/uk/ac/sanger @dirrm act-2.0/uk/ac @dirrm act-2.0/uk @dirrm act-2.0/lib/CVS @dirrm act-2.0/lib @dirrm act-2.0/collections/CVS @dirrm act-2.0/collections @dirrm act-2.0/type @dirrm act-2.0/nsdb/LocationPackage @dirrm act-2.0/nsdb/NucFeaturePackage @dirrm act-2.0/nsdb/EmblPackage @dirrm act-2.0/nsdb @dirrm act-2.0/seqdb @dirrm act-2.0/Ensembl/artemis @dirrm act-2.0/Ensembl @dirrm act-2.0