bin/aaindexextract bin/abiview bin/acdc bin/acdpretty bin/acdtable bin/acdtrace bin/acdvalid bin/antigenic bin/backtranseq bin/banana bin/biosed bin/btwisted bin/cai bin/chaos bin/charge bin/checktrans bin/chips bin/cirdna bin/codcmp bin/codcopy bin/coderet bin/compseq bin/cons bin/cpgplot bin/cpgreport bin/cusp bin/cutgextract bin/dan bin/cutseq bin/dbiblast bin/dbifasta bin/dbiflat bin/dbigcg bin/dbxfasta bin/dbxflat bin/dbxgcg bin/degapseq bin/descseq bin/diffseq bin/digest bin/distmat bin/dotmatcher bin/dotpath bin/dottup bin/dreg bin/einverted bin/embossdata bin/embossversion bin/emma bin/emowse bin/entret bin/epestfind bin/eprimer3 bin/equicktandem bin/est2genome bin/etandem bin/extractfeat bin/extractseq bin/findkm bin/freak bin/fuzznuc bin/fuzzpro bin/fuzztran bin/garnier bin/geecee bin/getorf bin/helixturnhelix bin/hmoment bin/iep bin/infoalign bin/infoseq bin/isochore bin/jembossctl bin/lindna bin/listor bin/marscan bin/maskfeat bin/maskseq bin/matcher bin/megamerger bin/merger bin/msbar bin/mwcontam bin/mwfilter bin/needle bin/newcpgreport bin/newcpgseek bin/newseq bin/noreturn bin/notseq bin/nthseq bin/octanol bin/oddcomp bin/palindrome bin/pasteseq bin/patmatdb bin/patmatmotifs bin/pepcoil bin/pepinfo bin/pepnet bin/pepstats bin/pepwheel bin/pepwindow bin/pepwindowall bin/plotcon bin/plotorf bin/polydot bin/preg bin/prettyplot bin/prettyseq bin/primersearch bin/printsextract bin/profit bin/prophecy bin/prophet bin/prosextract bin/pscan bin/psiphi bin/rebaseextract bin/recoder bin/redata bin/remap bin/restover bin/restrict bin/revseq bin/seealso bin/seqmatchall bin/seqret bin/seqretsplit bin/showalign bin/showdb bin/showfeat bin/showorf bin/showseq bin/shuffleseq bin/sigcleave bin/silent bin/sirna bin/sixpack bin/skipseq bin/syco bin/splitter bin/stretcher bin/stssearch bin/supermatcher bin/tcode bin/textsearch bin/tfextract bin/tfm bin/tfscan bin/tmap bin/tranalign bin/transeq bin/trimest bin/trimseq bin/twofeat bin/union bin/vectorstrip bin/water bin/whichdb bin/wobble bin/wordcount bin/wordmatch bin/wossname bin/yank bin/runJemboss.csh include/drivers.h include/pdf.h include/plcore.h include/plevent.h include/plplotP.h include/plxwd.h include/metadefs.h include/plConfig.h include/pldebug.h include/plplot.h include/plstrm.h include/plDevs.h include/ajax.h include/ajarch.h include/ajdefine.h include/ajacd.h include/ajalign.h include/ajarr.h include/ajassert.h include/ajbase.h include/ajcall.h include/ajcod.h include/ajdan.h include/ajdmx.h include/ajdomain.h include/ajexcept.h include/ajfeat.h include/ajfeatdata.h include/ajfile.h include/ajfmt.h include/ajgraph.h include/ajgraphxml.h include/ajgraphstruct.h include/ajhist.h include/ajindex.h include/ajjava.h include/ajlist.h include/ajmath.h include/ajmatrices.h include/ajmem.h include/ajmess.h include/ajnam.h include/ajnexus.h include/ajpdb.h include/ajpdbio.h include/ajphylo.h include/ajrange.h include/ajreg.h include/ajreport.h include/ajseq.h include/ajseqabi.h include/ajseqdata.h include/ajseqdb.h include/ajseqread.h include/ajseqtype.h include/ajseqwrite.h include/ajsort.h include/ajstr.h include/ajsys.h include/ajtable.h include/ajtime.h include/ajtranslate.h include/ajtree.h include/ajutil.h include/ajvector.h include/pcre.h include/pcre_chartables.c include/pcre_config.h include/pcre_get.c include/pcre_printint.c include/pcre_internal.h include/pcreposix.h include/emboss.h include/embaln.h include/embcom.h include/embcons.h include/embdata.h include/embdbi.h include/embdmx.h include/embdomain.h include/embest.h include/embexit.h include/embgroup.h include/embiep.h include/embindex.h include/embinit.h include/embmat.h include/embmisc.h include/embmol.h include/embnmer.h include/embpat.h include/embprop.h include/embpdb.h include/embread.h include/embsig.h include/embshow.h include/embword.h lib/libplplot.so.5 lib/libplplot.so lib/libplplot.la lib/libplplot.a lib/libajax.so.3 lib/libajax.so lib/libajax.la lib/libajax.a lib/libajaxg.so.3 lib/libajaxg.so lib/libajaxg.la lib/libajaxg.a lib/libnucleus.so.3 lib/libnucleus.so lib/libnucleus.la lib/libnucleus.a %%PORTDOCS%%%%DOCSDIR%%/manuals/admin.sty %%PORTDOCS%%%%DOCSDIR%%/manuals/admin.tex %%PORTDOCS%%%%DOCSDIR%%/manuals/admin.aux %%PORTDOCS%%%%DOCSDIR%%/manuals/admin.dvi %%PORTDOCS%%%%DOCSDIR%%/manuals/admin.log %%PORTDOCS%%%%DOCSDIR%%/manuals/admin.pdf %%PORTDOCS%%%%DOCSDIR%%/manuals/admin.ps %%PORTDOCS%%%%DOCSDIR%%/manuals/admin.toc %%PORTDOCS%%%%DOCSDIR%%/manuals/adminguide.tar.gz %%PORTDOCS%%%%DOCSDIR%%/manuals/domainatrix.doc %%PORTDOCS%%%%DOCSDIR%%/manuals/program.ps.gz %%PORTDOCS%%%%DOCSDIR%%/manuals/EMBOSS-FreeBSD-HOWTO.txt %%PORTDOCS%%%%DOCSDIR%%/manuals/emboss_qg.pdf %%PORTDOCS%%%%DOCSDIR%%/manuals/emboss_qg.ps %%PORTDOCS%%%%DOCSDIR%%/manuals/emboss.sty %%PORTDOCS%%%%DOCSDIR%%/manuals/fdl.txt %%PORTDOCS%%%%DOCSDIR%%/programs/html/lindna.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/listor.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/marscan.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/maskfeat.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/maskseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/matcher.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/matgen3d.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/megamerger.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/meme.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/menus_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/merger.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/msbar.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/mse.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/mwcontam.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/mwfilter.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/myseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nawalign.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nawalignrunner.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/needle.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/needlerunner.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/newcpgreport.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/newcpgseek.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/newseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/noreturn.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/notseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nthseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_2d_structure_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_codon_usage_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_codon_usage_nucleic_gene_finding_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_composition_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_cpg_islands_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_gene_finding_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_motifs_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_mutation_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_primers_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_profiles_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_repeats_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_restriction_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_transcription_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/nucleic_translation_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/octanol.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/oddcomp.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/palindrome.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/pasteseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/patmatdb.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/patmatmotifs.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/pdbparse.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/pdbplus.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/pdbtosp.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/pepcoil.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/pepinfo.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/pepnet.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/pepstats.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/pepwheel.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/pepwindow.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/pepwindowall.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/phylogeny_consensus_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/phylogeny_continuous_characters_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/phylogeny_discrete_characters_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/phylogeny_distance_matrix_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/phylogeny_gene_frequencies_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/phylogeny_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/phylogeny_molecular_sequence_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/phylogeny_tree_drawing_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/plotcon.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/plotorf.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/polydot.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/preg.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/prettyplot.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/prettyseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/primersearch.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/printsextract.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/profit.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/prophecy.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/prophet.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/prosextract.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/protein_2d_structure_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/protein_3d_structure_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/protein_composition_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/protein_motifs_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/protein_mutation_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/protein_profiles_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/protein_sequence_alignment_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/pscan.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/psiphi.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/rebaseextract.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/recoder.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/redata.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/remap.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/restover.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/restrict.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/revseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/rocon.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/rocplot.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/scope.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/scopparse.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/scorecmapdir.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/scorer.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/scorerrunner.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/seealso.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/seqalign.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/seqfraggle.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/seqmatchall.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/seqnr.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/seqret.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/seqretsplit.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/seqsearch.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/seqsort.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/seqwords.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/showalign.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/showdb.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/showfeat.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/showorf.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/showseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/shuffleseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/sigcleave.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/siggen.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/siggenlig.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/sigscan.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/sigscanlig.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/silent.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/sirna.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/sites.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/sixpack.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/skipseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/splitter.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ssematch.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/stretcher.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/stssearch.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/substitute.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/substituterunner.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/supermatcher.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/syco.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/tcode.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/template.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/test_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/textsearch.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/tfextract.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/tfm.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/tfscan.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/tmap.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/topo.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/tranalign.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/transeq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/trimest.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/trimseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/twofeat.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/union.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/utils_database_creation_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/utils_database_indexing_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/utils_misc_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/vectorstrip.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/water.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/whichdb.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/wobble.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/wordcount.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/wordmatch.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/wossname.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/yank.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/emboss_icon.jpg %%PORTDOCS%%%%DOCSDIR%%/programs/html/abiview.1.abiview.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/chaos.1.chaos.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/cirdna.1.cirdna.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/cpgplot.1.cpgplot.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/dan.2.dan.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/dotmatcher.1.dotmatcher.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/dotpath.1.dotpath.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/dottup.1.dottup.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/emboss_icon.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/findkm.1.findkm.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/isochore.1.isochore.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/lindna.1.lindna.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/octanol.1.octanol.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/pepinfo.1.pepinfo.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/pepnet.1.pepnet.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/pepwheel.1.pepwheel.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/pepwindow.1.pepwindow.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/pepwindowall.1.pepwindowall.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/plotcon.1.plotcon.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/plotorf.1.plotorf.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/plotorf.2.plotorf.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/polydot.1.polydot.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/prettyplot.1.prettyplot.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/prettyplot.2.prettyplot.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/syco.1.syco.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/tmap.1.tmap.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/topo.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/wobble.1.wobble.gif %%PORTDOCS%%%%DOCSDIR%%/programs/html/aaindexextract.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/abiview.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/acd_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/acdc.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/acdlog.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/acdpretty.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/acdtable.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/acdtrace.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/acdvalid.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ajtest.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/alignment_consensus_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/alignment_differences_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/alignment_dot_plots_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/antigenic.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/alignment_global_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/alignment_local_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/alignment_multiple_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/alignrunner.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/allversusall.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/backtranseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/banana.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/biosed.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/btwisted.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/cai.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/cathparse.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/chaos.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/charge.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/checktrans.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/chips.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/cirdna.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/codcmp.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/codcopy.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/coderet.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/comparator.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/compseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/cons.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/contactalign.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/contacts.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/cpgplot.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/cpgreport.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/crystalball.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/cusp.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/cutgextract.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/cutseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/dan.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/dbiblast.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/dbifasta.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/dbiflat.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/dbigcg.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/dbxfasta.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/dbxflat.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/dbxgcg.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/degapseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/degapseqrunner.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/descseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/diffseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/digest.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/display_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/distmat.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/domainalign.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/domainer.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/domainnr.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/domainrep.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/domainreso.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/domainseqs.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/domainsse.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/dotmatcher.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/dotpath.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/dottup.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/dreg.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ealistat.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/eclique.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/econsense.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/econtml.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/econtrast.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/edit_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ednacomp.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ednadist.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ednainvar.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ednaml.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ednamlk.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ednapars.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ednapenny.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/edollop.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/edolpenny.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/efactor.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/efitch.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/egendist.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ehmmalign.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ehmmbuild.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ehmmcalibrate.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ehmmconvert.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ehmmemit.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ehmmfetch.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ehmmindex.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ehmmpfam.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ehmmsearch.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/einverted.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ekitsch.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/embossdata.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/embossversion.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/emix.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/emma.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/emnu.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/emowse.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/eneighbor.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/entret.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/enzyme_kinetics_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/epenny.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/epestfind.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/eprimer3.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/eprotdist.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/eprotpars.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/equicktandem.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/erestml.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/eseqboot.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/esim4.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/est2genome.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/etandem.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/extractfeat.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/extractseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fclique.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fconsense.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fcontml.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fcontrast.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdiscboot.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdnacomp.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdnadist.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdnainvar.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdnaml.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdnamlk.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdnamove.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdnapars.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdnapenny.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdollop.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdolmove.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdolpenny.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdrawgram.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fdrawtree.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/feature_tables_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ffactor.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ffitch.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ffreqboot.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fgendist.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/findkm.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fkitsch.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fmix.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fmove.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fneighbor.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fpars.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fpenny.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fproml.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fpromlk.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fprotdist.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fprotpars.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/freak.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/frestboot.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/frestdist.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/frestml.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fretree.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fseqboot.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fseqbootall.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ftreedist.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/ftreedistpair.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fuzznuc.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fuzzpro.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/fuzztran.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/garnier.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/geecee.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/getorf.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/groups.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/helixturnhelix.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/hetparse.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/hmm_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/hmoment.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/iep.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/index.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/infoalign.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/information_group.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/infoseq.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/interface.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/isochore.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/jembossctl.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/libgen.html %%PORTDOCS%%%%DOCSDIR%%/programs/html/libscan.html %%PORTDOCS%%%%DOCSDIR%%/programs/text/jembossctl.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/libgen.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/libscan.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/lindna.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/listor.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/marscan.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/maskfeat.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/maskseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/matcher.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/matgen3d.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/megamerger.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/meme.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/merger.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/msbar.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/mse.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/mwcontam.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/mwfilter.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/myseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/nawalign.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/nawalignrunner.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/needle.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/needlerunner.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/newcpgreport.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/newcpgseek.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/newseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/noreturn.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/notseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/nthseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/octanol.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/oddcomp.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/palindrome.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/pasteseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/patmatdb.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/patmatmotifs.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/pdbparse.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/pdbplus.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/pdbtosp.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/pepcoil.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/pepinfo.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/pepnet.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/pepstats.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/pepwheel.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/pepwindow.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/pepwindowall.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/plotcon.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/plotorf.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/polydot.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/preg.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/prettyplot.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/prettyseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/primersearch.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/printsextract.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/profit.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/prophecy.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/prophet.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/prosextract.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/pscan.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/psiphi.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/rebaseextract.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/recoder.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/redata.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/remap.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/restover.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/restrict.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/revseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/rocon.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/rocplot.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/scope.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/scopparse.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/scorecmapdir.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/scorer.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/scorerrunner.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/seealso.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/seqalign.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/seqfraggle.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/seqmatchall.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/seqnr.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/seqret.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/seqretsplit.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/seqsearch.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/seqsort.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/seqwords.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/showalign.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/showdb.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/showfeat.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/showorf.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/showseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/shuffleseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/sigcleave.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/siggen.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/siggenlig.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/sigscan.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/sigscanlig.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/silent.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/sirna.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/SITE-DIRECTED.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/sites.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/sixpack.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/skipseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/splitter.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ssematch.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/stretcher.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/stssearch.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/substitute.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/substituterunner.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/supermatcher.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/syco.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/tcode.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/textsearch.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/tfextract.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/tfm.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/tfscan.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/tmap.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/topo.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/tranalign.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/transeq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/trimest.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/trimseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/twofeat.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/union.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/vectorstrip.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/water.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/whichdb.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/wobble.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/wordcount.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/wordmatch.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/wossname.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/yank.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/aaindexextract.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/abiview.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/acdc.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/acdlog.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/acdpretty.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/acdtable.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/cai.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/acdtrace.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/acdvalid.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/alignrunner.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/allversusall.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/antigenic.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/backtranseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/banana.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/biosed.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/btwisted.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/cathparse.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/chaos.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/charge.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/checktrans.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/chips.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/cirdna.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/codcmp.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/codcopy.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/coderet.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/comparator.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/complex.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/compseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/cons.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/contactalign.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/contacts.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/cpgplot.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/cpgreport.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/crystalball.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/cusp.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/cutgextract.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/cutseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/dan.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/dbiblast.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/dbifasta.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/dbiflat.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/dbigcg.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/dbxfasta.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/dbxflat.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/dbxgcg.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/degapseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/degapseqrunner.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/descseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/diffseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/digest.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/distmat.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/domainalign.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/domainer.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/domainnr.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/domainrep.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/domainreso.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/domainseqs.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/domainsse.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/dotmatcher.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/dotpath.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/dottup.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/dreg.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ealistat.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/eclique.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/econsense.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/econtml.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/econtrast.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ednacomp.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ednadist.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ednainvar.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ednaml.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ednamlk.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ednapars.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ednapenny.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/edollop.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/iep.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/edolpenny.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/efactor.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/efitch.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/egendist.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ehmmalign.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ehmmbuild.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ehmmcalibrate.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ehmmconvert.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ehmmemit.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ehmmfetch.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ehmmindex.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ehmmpfam.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ehmmsearch.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/einverted.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ekitsch.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/embossdata.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/embossversion.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/emix.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/emma.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/emnu.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/emowse.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/eneighbor.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/entret.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/epenny.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/epestfind.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/eprimer3.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/eprotdist.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/eprotpars.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/equicktandem.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/erestml.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/eseqboot.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/esim4.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/est2genome.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/etandem.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/extractfeat.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/extractseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fclique.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fconsense.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fcontml.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fcontrast.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdiscboot.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdnacomp.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdnadist.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdnainvar.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdnaml.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdnamlk.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdnamove.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdnapars.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdnapenny.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdollop.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdolmove.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdolpenny.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdrawgram.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fdrawtree.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ffactor.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ffitch.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ffreqboot.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fgendist.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/findkm.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fkitsch.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fmix.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fmove.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fneighbor.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fpars.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fpenny.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fproml.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fpromlk.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fprotdist.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fprotpars.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/freak.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/frestboot.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/frestdist.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/frestml.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fretree.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fseqboot.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fseqbootall.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ftreedist.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/ftreedistpair.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fuzznuc.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fuzzpro.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/fuzztran.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/garnier.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/geecee.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/getorf.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/helixturnhelix.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/hetparse.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/hmoment.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/infoalign.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/infoseq.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/interface.txt %%PORTDOCS%%%%DOCSDIR%%/programs/text/isochore.txt %%PORTDOCS%%%%DOCSDIR%%/tutorials/emboss-gcg.ppt %%PORTDOCS%%%%DOCSDIR%%/tutorials/emboss-interfaces.ppt %%PORTDOCS%%%%DOCSDIR%%/tutorials/emboss-talk.ppt %%PORTDOCS%%%%DOCSDIR%%/tutorials/emboss_tut.tar.gz %%DATADIR%%/plstnd5.fnt %%DATADIR%%/plxtnd5.fnt %%DATADIR%%/acd/needle.acd %%DATADIR%%/acd/newcoils.acd %%DATADIR%%/acd/newcpgreport.acd %%DATADIR%%/acd/newcpgseek.acd %%DATADIR%%/acd/newseq.acd %%DATADIR%%/acd/noreturn.acd %%DATADIR%%/acd/notseq.acd %%DATADIR%%/acd/nthseq.acd %%DATADIR%%/acd/octanol.acd %%DATADIR%%/acd/oddcomp.acd %%DATADIR%%/acd/palindrome.acd %%DATADIR%%/acd/pasteseq.acd %%DATADIR%%/acd/patmatdb.acd %%DATADIR%%/acd/patmatmotifs.acd %%DATADIR%%/acd/patmattest.acd %%DATADIR%%/acd/pepcoil.acd %%DATADIR%%/acd/pepinfo.acd %%DATADIR%%/acd/pepnet.acd %%DATADIR%%/acd/pepstats.acd %%DATADIR%%/acd/pepwheel.acd %%DATADIR%%/acd/pepwindow.acd %%DATADIR%%/acd/pepwindowall.acd %%DATADIR%%/acd/plotcon.acd %%DATADIR%%/acd/plotorf.acd %%DATADIR%%/acd/polydot.acd %%DATADIR%%/acd/preg.acd %%DATADIR%%/acd/prettyplot.acd %%DATADIR%%/acd/prettyseq.acd %%DATADIR%%/acd/prima.acd %%DATADIR%%/acd/primers.acd %%DATADIR%%/acd/primersearch.acd %%DATADIR%%/acd/printsextract.acd %%DATADIR%%/acd/profit.acd %%DATADIR%%/acd/prophecy.acd %%DATADIR%%/acd/prophet.acd %%DATADIR%%/acd/prosextract.acd %%DATADIR%%/acd/pscan.acd %%DATADIR%%/acd/psiphi.acd %%DATADIR%%/acd/rebaseextract.acd %%DATADIR%%/acd/recoder.acd %%DATADIR%%/acd/redata.acd %%DATADIR%%/acd/remap.acd %%DATADIR%%/acd/restover.acd %%DATADIR%%/acd/revseq.acd %%DATADIR%%/acd/restrict.acd %%DATADIR%%/acd/seealso.acd %%DATADIR%%/acd/seqinfo.acd %%DATADIR%%/acd/seqmatchall.acd %%DATADIR%%/acd/seqret.acd %%DATADIR%%/acd/seqretall.acd %%DATADIR%%/acd/seqretallfeat.acd %%DATADIR%%/acd/seqretset.acd %%DATADIR%%/acd/seqretsingle.acd %%DATADIR%%/acd/seqretsplit.acd %%DATADIR%%/acd/seqrettype.acd %%DATADIR%%/acd/showalign.acd %%DATADIR%%/acd/showdb.acd %%DATADIR%%/acd/showfeat.acd %%DATADIR%%/acd/showorf.acd %%DATADIR%%/acd/showseq.acd %%DATADIR%%/acd/shuffleseq.acd %%DATADIR%%/acd/sigcleave.acd %%DATADIR%%/acd/silent.acd %%DATADIR%%/acd/sirna.acd %%DATADIR%%/acd/sixpack.acd %%DATADIR%%/acd/skipseq.acd %%DATADIR%%/acd/tfm.acd %%DATADIR%%/acd/splitter.acd %%DATADIR%%/acd/stretcher.acd %%DATADIR%%/acd/stssearch.acd %%DATADIR%%/acd/supermatcher.acd %%DATADIR%%/acd/syco.acd %%DATADIR%%/acd/tcode.acd %%DATADIR%%/acd/testplot.acd %%DATADIR%%/acd/textsearch.acd %%DATADIR%%/acd/tfextract.acd %%DATADIR%%/acd/tfscan.acd %%DATADIR%%/acd/tmap.acd %%DATADIR%%/acd/tranalign.acd %%DATADIR%%/acd/transeq.acd %%DATADIR%%/acd/treetypedisplay.acd %%DATADIR%%/acd/trimest.acd %%DATADIR%%/acd/trimseq.acd %%DATADIR%%/acd/twofeat.acd %%DATADIR%%/acd/union.acd %%DATADIR%%/acd/vectorstrip.acd %%DATADIR%%/acd/water.acd %%DATADIR%%/acd/whichdb.acd %%DATADIR%%/acd/wobble.acd %%DATADIR%%/acd/wordcount.acd %%DATADIR%%/acd/wordmatch.acd %%DATADIR%%/acd/wossname.acd %%DATADIR%%/acd/yank.acd %%DATADIR%%/acd/codes.english %%DATADIR%%/acd/groups.standard %%DATADIR%%/acd/knowntypes.standard %%DATADIR%%/acd/sections.standard %%DATADIR%%/acd/variables.standard %%DATADIR%%/acd/aaindexextract.acd %%DATADIR%%/acd/abiview.acd %%DATADIR%%/acd/acdc.acd %%DATADIR%%/acd/acdlog.acd %%DATADIR%%/acd/acdpretty.acd %%DATADIR%%/acd/acdtable.acd %%DATADIR%%/acd/acdtrace.acd %%DATADIR%%/acd/acdvalid.acd %%DATADIR%%/acd/ajbad.acd %%DATADIR%%/acd/ajfeatest.acd %%DATADIR%%/acd/ajtest.acd %%DATADIR%%/acd/antigenic.acd %%DATADIR%%/acd/backtranseq.acd %%DATADIR%%/acd/cai.acd %%DATADIR%%/acd/banana.acd %%DATADIR%%/acd/biosed.acd %%DATADIR%%/acd/btwisted.acd %%DATADIR%%/acd/chaos.acd %%DATADIR%%/acd/charge.acd %%DATADIR%%/acd/checktrans.acd %%DATADIR%%/acd/chips.acd %%DATADIR%%/acd/cirdna.acd %%DATADIR%%/acd/codcmp.acd %%DATADIR%%/acd/codcopy.acd %%DATADIR%%/acd/coderet.acd %%DATADIR%%/acd/complex.acd %%DATADIR%%/acd/compseq.acd %%DATADIR%%/acd/cons.acd %%DATADIR%%/acd/corbatest.acd %%DATADIR%%/acd/cpgplot.acd %%DATADIR%%/acd/cpgreport.acd %%DATADIR%%/acd/cusp.acd %%DATADIR%%/acd/cutgextract.acd %%DATADIR%%/acd/cutseq.acd %%DATADIR%%/acd/dan.acd %%DATADIR%%/acd/dbiblast.acd %%DATADIR%%/acd/dbifasta.acd %%DATADIR%%/acd/dbiflat.acd %%DATADIR%%/acd/dbigcg.acd %%DATADIR%%/acd/dbxfasta.acd %%DATADIR%%/acd/dbxflat.acd %%DATADIR%%/acd/dbxgcg.acd %%DATADIR%%/acd/degapseq.acd %%DATADIR%%/acd/demoalign.acd %%DATADIR%%/acd/demofeatures.acd %%DATADIR%%/acd/demolist.acd %%DATADIR%%/acd/demoreport.acd %%DATADIR%%/acd/demosequence.acd %%DATADIR%%/acd/demostring.acd %%DATADIR%%/acd/demotable.acd %%DATADIR%%/acd/descseq.acd %%DATADIR%%/acd/diffseq.acd %%DATADIR%%/acd/digest.acd %%DATADIR%%/acd/distmat.acd %%DATADIR%%/acd/dotmatcher.acd %%DATADIR%%/acd/dotpath.acd %%DATADIR%%/acd/dottup.acd %%DATADIR%%/acd/dreg.acd %%DATADIR%%/acd/einverted.acd %%DATADIR%%/acd/embossdata.acd %%DATADIR%%/acd/iep.acd %%DATADIR%%/acd/embossversion.acd %%DATADIR%%/acd/emma.acd %%DATADIR%%/acd/emowse.acd %%DATADIR%%/acd/entrails.acd %%DATADIR%%/acd/entret.acd %%DATADIR%%/acd/epestfind.acd %%DATADIR%%/acd/eprimer3.acd %%DATADIR%%/acd/equicktandem.acd %%DATADIR%%/acd/est2genome.acd %%DATADIR%%/acd/etandem.acd %%DATADIR%%/acd/extractfeat.acd %%DATADIR%%/acd/extractseq.acd %%DATADIR%%/acd/findkm.acd %%DATADIR%%/acd/freak.acd %%DATADIR%%/acd/fuzznuc.acd %%DATADIR%%/acd/fuzzpro.acd %%DATADIR%%/acd/fuzztran.acd %%DATADIR%%/acd/garnier.acd %%DATADIR%%/acd/geecee.acd %%DATADIR%%/acd/getorf.acd %%DATADIR%%/acd/giep.acd %%DATADIR%%/acd/helixturnhelix.acd %%DATADIR%%/acd/hmoment.acd %%DATADIR%%/acd/histogramtest.acd %%DATADIR%%/acd/infoalign.acd %%DATADIR%%/acd/infoseq.acd %%DATADIR%%/acd/intconv.acd %%DATADIR%%/acd/isochore.acd %%DATADIR%%/acd/kmrsplitter.acd %%DATADIR%%/acd/kmrunion.acd %%DATADIR%%/acd/lindna.acd %%DATADIR%%/acd/listor.acd %%DATADIR%%/acd/marscan.acd %%DATADIR%%/acd/maskfeat.acd %%DATADIR%%/acd/maskseq.acd %%DATADIR%%/acd/matcher.acd %%DATADIR%%/acd/megamerger.acd %%DATADIR%%/acd/merger.acd %%DATADIR%%/acd/msbar.acd %%DATADIR%%/acd/mwcontam.acd %%DATADIR%%/acd/mwfilter.acd %%DATADIR%%/data/AAINDEX/dummyfile %%DATADIR%%/data/CODONS/Cut.index %%DATADIR%%/data/CODONS/Eacica.cut %%DATADIR%%/data/CODONS/Eagrtu.cut %%DATADIR%%/data/CODONS/Eanasp.cut %%DATADIR%%/data/CODONS/Earath.cut %%DATADIR%%/data/CODONS/Eazovi.cut %%DATADIR%%/data/CODONS/Ebacme.cut %%DATADIR%%/data/CODONS/Ebacst.cut %%DATADIR%%/data/CODONS/Ebacsu.cut %%DATADIR%%/data/CODONS/Ebacsu_high.cut %%DATADIR%%/data/CODONS/Ebommo.cut %%DATADIR%%/data/CODONS/Ebovin.cut %%DATADIR%%/data/CODONS/Ebpphx.cut %%DATADIR%%/data/CODONS/Ebraja.cut %%DATADIR%%/data/CODONS/Ebrana.cut %%DATADIR%%/data/CODONS/Ebrare.cut %%DATADIR%%/data/CODONS/Ecaeel.cut %%DATADIR%%/data/CODONS/Ecanal.cut %%DATADIR%%/data/CODONS/Ecanfa.cut %%DATADIR%%/data/CODONS/Ecaucr.cut %%DATADIR%%/data/CODONS/Echick.cut %%DATADIR%%/data/CODONS/Echlre.cut %%DATADIR%%/data/CODONS/Echltr.cut %%DATADIR%%/data/CODONS/Ecloab.cut %%DATADIR%%/data/CODONS/Ecrigr.cut %%DATADIR%%/data/CODONS/Ecyapa.cut %%DATADIR%%/data/CODONS/Edayhoff.cut %%DATADIR%%/data/CODONS/Edicdi.cut %%DATADIR%%/data/CODONS/Edicdi_high.cut %%DATADIR%%/data/CODONS/Edrome.cut %%DATADIR%%/data/CODONS/Edrome_high.cut %%DATADIR%%/data/CODONS/Eecoli.cut %%DATADIR%%/data/CODONS/Eecoli_high.cut %%DATADIR%%/data/CODONS/Eemeni.cut %%DATADIR%%/data/CODONS/Eemeni_mit.cut %%DATADIR%%/data/CODONS/Eemeni_high.cut %%DATADIR%%/data/CODONS/Eerwct.cut %%DATADIR%%/data/CODONS/Ehaein.cut %%DATADIR%%/data/CODONS/Ehalma.cut %%DATADIR%%/data/CODONS/Ehalsa.cut %%DATADIR%%/data/CODONS/Ehorvu.cut %%DATADIR%%/data/CODONS/Ehuman.cut %%DATADIR%%/data/CODONS/Eklepn.cut %%DATADIR%%/data/CODONS/Eklula.cut %%DATADIR%%/data/CODONS/Elacdl.cut %%DATADIR%%/data/CODONS/Elyces.cut %%DATADIR%%/data/CODONS/Emacfa.cut %%DATADIR%%/data/CODONS/Emaize.cut %%DATADIR%%/data/CODONS/Emaize_chl.cut %%DATADIR%%/data/CODONS/Emammal_high.cut %%DATADIR%%/data/CODONS/Emanse.cut %%DATADIR%%/data/CODONS/Emarpo_chl.cut %%DATADIR%%/data/CODONS/Emedsa.cut %%DATADIR%%/data/CODONS/Emetth.cut %%DATADIR%%/data/CODONS/Emouse.cut %%DATADIR%%/data/CODONS/Emyctu.cut %%DATADIR%%/data/CODONS/Eneigo.cut %%DATADIR%%/data/CODONS/Eneucr.cut %%DATADIR%%/data/CODONS/Eoncmy.cut %%DATADIR%%/data/CODONS/Eorysa.cut %%DATADIR%%/data/CODONS/Eorysa_chl.cut %%DATADIR%%/data/CODONS/Epea.cut %%DATADIR%%/data/CODONS/Epethy.cut %%DATADIR%%/data/CODONS/Ephavu.cut %%DATADIR%%/data/CODONS/Epig.cut %%DATADIR%%/data/CODONS/Eplafa.cut %%DATADIR%%/data/CODONS/Eprovu.cut %%DATADIR%%/data/CODONS/Epseae.cut %%DATADIR%%/data/CODONS/Epsepu.cut %%DATADIR%%/data/CODONS/Epsesm.cut %%DATADIR%%/data/CODONS/Erabit.cut %%DATADIR%%/data/CODONS/Erat.cut %%DATADIR%%/data/CODONS/Erhile.cut %%DATADIR%%/data/CODONS/Erhime.cut %%DATADIR%%/data/CODONS/Erhoca.cut %%DATADIR%%/data/CODONS/Erhosh.cut %%DATADIR%%/data/CODONS/Esalsa.cut %%DATADIR%%/data/CODONS/Esalty.cut %%DATADIR%%/data/CODONS/Eschma.cut %%DATADIR%%/data/CODONS/Eschpo.cut %%DATADIR%%/data/CODONS/Eschpo_cai.cut %%DATADIR%%/data/CODONS/Eschpo_high.cut %%DATADIR%%/data/CODONS/Eserma.cut %%DATADIR%%/data/CODONS/Esheep.cut %%DATADIR%%/data/CODONS/Esoltu.cut %%DATADIR%%/data/CODONS/Esoybn.cut %%DATADIR%%/data/CODONS/Espiol.cut %%DATADIR%%/data/CODONS/Estaau.cut %%DATADIR%%/data/CODONS/Estrco.cut %%DATADIR%%/data/CODONS/Estrmu.cut %%DATADIR%%/data/CODONS/Estrpn.cut %%DATADIR%%/data/CODONS/Estrpu.cut %%DATADIR%%/data/CODONS/Esyncy.cut %%DATADIR%%/data/CODONS/Esynco.cut %%DATADIR%%/data/CODONS/Etetth.cut %%DATADIR%%/data/CODONS/Etheth.cut %%DATADIR%%/data/CODONS/Etobac.cut %%DATADIR%%/data/CODONS/Etobac_chl.cut %%DATADIR%%/data/CODONS/Etrybr.cut %%DATADIR%%/data/CODONS/Etrycr.cut %%DATADIR%%/data/CODONS/Evibch.cut %%DATADIR%%/data/CODONS/Ewheat.cut %%DATADIR%%/data/CODONS/Exenla.cut %%DATADIR%%/data/CODONS/Eyeast.cut %%DATADIR%%/data/CODONS/Eyeast_cai.cut %%DATADIR%%/data/CODONS/Eyeast_high.cut %%DATADIR%%/data/CODONS/Eyeast_mit.cut %%DATADIR%%/data/CODONS/Eyeren.cut %%DATADIR%%/data/CODONS/Eyerpe.cut %%DATADIR%%/data/CODONS/Eacc.cut %%DATADIR%%/data/CODONS/Eadenovirus5.cut %%DATADIR%%/data/CODONS/Eadenovirus7.cut %%DATADIR%%/data/CODONS/Eaidlav.cut %%DATADIR%%/data/CODONS/Eani.cut %%DATADIR%%/data/CODONS/Eani_h.cut %%DATADIR%%/data/CODONS/Eanidmit.cut %%DATADIR%%/data/CODONS/Easn.cut %%DATADIR%%/data/CODONS/Eath.cut %%DATADIR%%/data/CODONS/Eatu.cut %%DATADIR%%/data/CODONS/Eavi.cut %%DATADIR%%/data/CODONS/Ef1.cut %%DATADIR%%/data/CODONS/Ebja.cut %%DATADIR%%/data/CODONS/Ebly.cut %%DATADIR%%/data/CODONS/Ebme.cut %%DATADIR%%/data/CODONS/Ebmo.cut %%DATADIR%%/data/CODONS/Ebna.cut %%DATADIR%%/data/CODONS/Ebov.cut %%DATADIR%%/data/CODONS/Ebovsp.cut %%DATADIR%%/data/CODONS/Ebst.cut %%DATADIR%%/data/CODONS/Ebsu.cut %%DATADIR%%/data/CODONS/Ebsu_h.cut %%DATADIR%%/data/CODONS/Ecac.cut %%DATADIR%%/data/CODONS/Ecal.cut %%DATADIR%%/data/CODONS/Eccr.cut %%DATADIR%%/data/CODONS/Ecel.cut %%DATADIR%%/data/CODONS/Echi.cut %%DATADIR%%/data/CODONS/Echicken.cut %%DATADIR%%/data/CODONS/Echisp.cut %%DATADIR%%/data/CODONS/Echk.cut %%DATADIR%%/data/CODONS/Echmp.cut %%DATADIR%%/data/CODONS/Echnt.cut %%DATADIR%%/data/CODONS/Echos.cut %%DATADIR%%/data/CODONS/Echzm.cut %%DATADIR%%/data/CODONS/Echzmrubp.cut %%DATADIR%%/data/CODONS/Ecpx.cut %%DATADIR%%/data/CODONS/Ecre.cut %%DATADIR%%/data/CODONS/Ecrisp.cut %%DATADIR%%/data/CODONS/Ectr.cut %%DATADIR%%/data/CODONS/Eddi.cut %%DATADIR%%/data/CODONS/Eddi_h.cut %%DATADIR%%/data/CODONS/Edog.cut %%DATADIR%%/data/CODONS/Edro.cut %%DATADIR%%/data/CODONS/Edro_h.cut %%DATADIR%%/data/CODONS/Edrosophila.cut %%DATADIR%%/data/CODONS/Eeca.cut %%DATADIR%%/data/CODONS/Eeco.cut %%DATADIR%%/data/CODONS/Eeco_h.cut %%DATADIR%%/data/CODONS/Efish.cut %%DATADIR%%/data/CODONS/Efmdvpolyp.cut %%DATADIR%%/data/CODONS/Eham.cut %%DATADIR%%/data/CODONS/Ehha.cut %%DATADIR%%/data/CODONS/Ehin.cut %%DATADIR%%/data/CODONS/Ehma.cut %%DATADIR%%/data/CODONS/Ehum.cut %%DATADIR%%/data/CODONS/Ekla.cut %%DATADIR%%/data/CODONS/Ekpn.cut %%DATADIR%%/data/CODONS/Ella.cut %%DATADIR%%/data/CODONS/Emac.cut %%DATADIR%%/data/CODONS/Emam_h.cut %%DATADIR%%/data/CODONS/Emixlg.cut %%DATADIR%%/data/CODONS/Emsa.cut %%DATADIR%%/data/CODONS/Emse.cut %%DATADIR%%/data/CODONS/Emta.cut %%DATADIR%%/data/CODONS/Emtu.cut %%DATADIR%%/data/CODONS/Emus.cut %%DATADIR%%/data/CODONS/Emussp.cut %%DATADIR%%/data/CODONS/Emva.cut %%DATADIR%%/data/CODONS/Emze.cut %%DATADIR%%/data/CODONS/Emzecp.cut %%DATADIR%%/data/CODONS/Encr.cut %%DATADIR%%/data/CODONS/Eneu.cut %%DATADIR%%/data/CODONS/Engo.cut %%DATADIR%%/data/CODONS/Eoncsp.cut %%DATADIR%%/data/CODONS/Epae.cut %%DATADIR%%/data/CODONS/Epet.cut %%DATADIR%%/data/CODONS/Epfa.cut %%DATADIR%%/data/CODONS/Ephix174.cut %%DATADIR%%/data/CODONS/Ephv.cut %%DATADIR%%/data/CODONS/Ephy.cut %%DATADIR%%/data/CODONS/Epolyomaa2.cut %%DATADIR%%/data/CODONS/Epombe.cut %%DATADIR%%/data/CODONS/Epombecai.cut %%DATADIR%%/data/CODONS/Epot.cut %%DATADIR%%/data/CODONS/Eppu.cut %%DATADIR%%/data/CODONS/Epse.cut %%DATADIR%%/data/CODONS/Epsy.cut %%DATADIR%%/data/CODONS/Epvu.cut %%DATADIR%%/data/CODONS/Erab.cut %%DATADIR%%/data/CODONS/Erabbit.cut %%DATADIR%%/data/CODONS/Erabsp.cut %%DATADIR%%/data/CODONS/Eratsp.cut %%DATADIR%%/data/CODONS/Erca.cut %%DATADIR%%/data/CODONS/Erhm.cut %%DATADIR%%/data/CODONS/Eric.cut %%DATADIR%%/data/CODONS/Erle.cut %%DATADIR%%/data/CODONS/Erme.cut %%DATADIR%%/data/CODONS/Ersp.cut %%DATADIR%%/data/CODONS/Esalsp.cut %%DATADIR%%/data/CODONS/Esau.cut %%DATADIR%%/data/CODONS/Esco.cut %%DATADIR%%/data/CODONS/Esgi.cut %%DATADIR%%/data/CODONS/Eshp.cut %%DATADIR%%/data/CODONS/Eshpsp.cut %%DATADIR%%/data/CODONS/Esli.cut %%DATADIR%%/data/CODONS/Eslm.cut %%DATADIR%%/data/CODONS/Esma.cut %%DATADIR%%/data/CODONS/Esmi.cut %%DATADIR%%/data/CODONS/Esmu.cut %%DATADIR%%/data/CODONS/Esoy.cut %%DATADIR%%/data/CODONS/Espi.cut %%DATADIR%%/data/CODONS/Espn.cut %%DATADIR%%/data/CODONS/Espo.cut %%DATADIR%%/data/CODONS/Espo_h.cut %%DATADIR%%/data/CODONS/Espu.cut %%DATADIR%%/data/CODONS/Esta.cut %%DATADIR%%/data/CODONS/Esty.cut %%DATADIR%%/data/CODONS/Esus.cut %%DATADIR%%/data/CODONS/Esv40.cut %%DATADIR%%/data/CODONS/Esyhsp.cut %%DATADIR%%/data/CODONS/Esynsp.cut %%DATADIR%%/data/CODONS/Etbr.cut %%DATADIR%%/data/CODONS/Etcr.cut %%DATADIR%%/data/CODONS/Eter.cut %%DATADIR%%/data/CODONS/Etetsp.cut %%DATADIR%%/data/CODONS/Etob.cut %%DATADIR%%/data/CODONS/Etobcp.cut %%DATADIR%%/data/CODONS/Etom.cut %%DATADIR%%/data/CODONS/Etrb.cut %%DATADIR%%/data/CODONS/Evco.cut %%DATADIR%%/data/CODONS/Ewht.cut %%DATADIR%%/data/CODONS/Exel.cut %%DATADIR%%/data/CODONS/Exenopus.cut %%DATADIR%%/data/CODONS/Eyeastcai.cut %%DATADIR%%/data/CODONS/Eyen.cut %%DATADIR%%/data/CODONS/Eysc.cut %%DATADIR%%/data/CODONS/Eysc_h.cut %%DATADIR%%/data/CODONS/Eyscmt.cut %%DATADIR%%/data/CODONS/Eysp.cut %%DATADIR%%/data/CODONS/Ezebrafish.cut %%DATADIR%%/data/CODONS/Ezma.cut %%DATADIR%%/data/REBASE/dummyfile %%DATADIR%%/data/PRINTS/dummyfile %%DATADIR%%/data/PROSITE/dummyfile %%DATADIR%%/data/EBLOSUM30 %%DATADIR%%/data/EBLOSUM35 %%DATADIR%%/data/EBLOSUM40 %%DATADIR%%/data/EBLOSUM45 %%DATADIR%%/data/EBLOSUM50 %%DATADIR%%/data/EBLOSUM55 %%DATADIR%%/data/EBLOSUM60 %%DATADIR%%/data/EBLOSUM62 %%DATADIR%%/data/EBLOSUM62-12 %%DATADIR%%/data/EBLOSUM65 %%DATADIR%%/data/EBLOSUM70 %%DATADIR%%/data/EBLOSUM75 %%DATADIR%%/data/EBLOSUM80 %%DATADIR%%/data/EBLOSUM85 %%DATADIR%%/data/EBLOSUM90 %%DATADIR%%/data/EBLOSUMN %%DATADIR%%/data/EDNAFULL %%DATADIR%%/data/EDNAMAT %%DATADIR%%/data/EGC.0 %%DATADIR%%/data/EGC.1 %%DATADIR%%/data/EGC.10 %%DATADIR%%/data/EGC.11 %%DATADIR%%/data/EGC.12 %%DATADIR%%/data/EGC.13 %%DATADIR%%/data/EGC.14 %%DATADIR%%/data/EGC.15 %%DATADIR%%/data/EGC.16 %%DATADIR%%/data/EGC.2 %%DATADIR%%/data/EGC.21 %%DATADIR%%/data/EGC.22 %%DATADIR%%/data/EGC.23 %%DATADIR%%/data/EGC.3 %%DATADIR%%/data/EGC.4 %%DATADIR%%/data/EGC.5 %%DATADIR%%/data/EGC.6 %%DATADIR%%/data/EGC.9 %%DATADIR%%/data/EGC.index %%DATADIR%%/data/EGC.txt %%DATADIR%%/data/ENUC.4.2 %%DATADIR%%/data/ENUC.4.4 %%DATADIR%%/data/EPAM10 %%DATADIR%%/data/EPAM100 %%DATADIR%%/data/EPAM110 %%DATADIR%%/data/EPAM120 %%DATADIR%%/data/EPAM130 %%DATADIR%%/data/EPAM140 %%DATADIR%%/data/EPAM150 %%DATADIR%%/data/EPAM160 %%DATADIR%%/data/EPAM170 %%DATADIR%%/data/EPAM180 %%DATADIR%%/data/EPAM190 %%DATADIR%%/data/EPAM20 %%DATADIR%%/data/EPAM200 %%DATADIR%%/data/EPAM210 %%DATADIR%%/data/EPAM220 %%DATADIR%%/data/EPAM230 %%DATADIR%%/data/EPAM240 %%DATADIR%%/data/EPAM250 %%DATADIR%%/data/EPAM260 %%DATADIR%%/data/EPAM270 %%DATADIR%%/data/EPAM280 %%DATADIR%%/data/EPAM290 %%DATADIR%%/data/EPAM30 %%DATADIR%%/data/EPAM300 %%DATADIR%%/data/EPAM310 %%DATADIR%%/data/EPAM320 %%DATADIR%%/data/EPAM330 %%DATADIR%%/data/EPAM340 %%DATADIR%%/data/EPAM350 %%DATADIR%%/data/EPAM360 %%DATADIR%%/data/EPAM370 %%DATADIR%%/data/EPAM380 %%DATADIR%%/data/EPAM390 %%DATADIR%%/data/EPAM40 %%DATADIR%%/data/EPAM400 %%DATADIR%%/data/EPAM410 %%DATADIR%%/data/EPAM420 %%DATADIR%%/data/EPAM430 %%DATADIR%%/data/EPAM440 %%DATADIR%%/data/EPAM450 %%DATADIR%%/data/EPAM460 %%DATADIR%%/data/EPAM470 %%DATADIR%%/data/EPAM480 %%DATADIR%%/data/EPAM490 %%DATADIR%%/data/EPAM50 %%DATADIR%%/data/EPAM500 %%DATADIR%%/data/EPAM60 %%DATADIR%%/data/EPAM70 %%DATADIR%%/data/EPAM80 %%DATADIR%%/data/EPAM90 %%DATADIR%%/data/Eaa_acc_surface.dat %%DATADIR%%/data/Eaa_hydropathy.dat %%DATADIR%%/data/Eaa_properties.dat %%DATADIR%%/data/Eamino.dat %%DATADIR%%/data/Eangles.dat %%DATADIR%%/data/Eangles_tri.dat %%DATADIR%%/data/Eantigenic.dat %%DATADIR%%/data/Ebases.iub %%DATADIR%%/data/Edayhoff.freq %%DATADIR%%/data/Edna.melt %%DATADIR%%/data/Eembl.ior %%DATADIR%%/data/Eenergy.dat %%DATADIR%%/data/Efeatures.embl %%DATADIR%%/data/Efeatures.emboss %%DATADIR%%/data/Efeatures.gff %%DATADIR%%/data/Efeatures.pir %%DATADIR%%/data/Efeatures.protein %%DATADIR%%/data/Efeatures.swiss %%DATADIR%%/data/Efreqs.dat %%DATADIR%%/data/Ehet.dat %%DATADIR%%/data/Ehth.dat %%DATADIR%%/data/Ehth87.dat %%DATADIR%%/data/Ememe.dat %%DATADIR%%/data/Enakai.dat %%DATADIR%%/data/Epepcoil.dat %%DATADIR%%/data/Epk.dat %%DATADIR%%/data/Epprofile %%DATADIR%%/data/Eprior1.plib %%DATADIR%%/data/Eprior30.plib %%DATADIR%%/data/Erna.melt %%DATADIR%%/data/Esig.euk %%DATADIR%%/data/Esig.pro %%DATADIR%%/data/Etags.embl %%DATADIR%%/data/Etags.emboss %%DATADIR%%/data/Etags.gff %%DATADIR%%/data/Etags.pir %%DATADIR%%/data/Etags.protein %%DATADIR%%/data/Etags.swiss %%DATADIR%%/data/Etcode.dat %%DATADIR%%/data/Evdw.dat %%DATADIR%%/data/Ewhite-wimley.dat %%DATADIR%%/data/embossre.equ %%DATADIR%%/data/Emwfilter.dat %%DATADIR%%/data/Emass.dat %%DATADIR%%/data/Emassmod.dat %%DATADIR%%/data/Matrices.nucleotide %%DATADIR%%/data/Matrices.protein %%DATADIR%%/data/Matrices.proteinstructure %%DATADIR%%/emboss.default.template %%DATADIR%%/test/data/aaindex1.test %%DATADIR%%/test/data/prosite.dat %%DATADIR%%/test/data/prosite.doc %%DATADIR%%/test/data/prints.test %%DATADIR%%/test/data/withrefm %%DATADIR%%/test/data/site.dat %%DATADIR%%/test/data/cutg.codon %%DATADIR%%/test/data/dna.acedb %%DATADIR%%/test/data/dna.aln %%DATADIR%%/test/data/dna.asn1 %%DATADIR%%/test/data/dna.codata %%DATADIR%%/test/data/dna.embl %%DATADIR%%/test/data/dna.fasta %%DATADIR%%/test/data/dna.fitch %%DATADIR%%/test/data/dna.gcg %%DATADIR%%/test/data/dna.gcg8 %%DATADIR%%/test/data/dna.genbank %%DATADIR%%/test/data/dna.ig %%DATADIR%%/test/data/dna.m-acedb %%DATADIR%%/test/data/dna.m-codata %%DATADIR%%/test/data/dna.m-embl %%DATADIR%%/test/data/dna.m-fasta %%DATADIR%%/test/data/dna.m-fasta-long %%DATADIR%%/test/data/dna.m-ncbi %%DATADIR%%/test/data/dna.m-strider %%DATADIR%%/test/data/dna.msf %%DATADIR%%/test/data/dna.msf8 %%DATADIR%%/test/data/dna.ncbi %%DATADIR%%/test/data/dna.phylip %%DATADIR%%/test/data/dna.phylip3 %%DATADIR%%/test/data/dna.staden %%DATADIR%%/test/data/dna.strider %%DATADIR%%/test/data/dna.text %%DATADIR%%/test/data/feat.emft %%DATADIR%%/test/data/feat.fasta %%DATADIR%%/test/data/feat.pir %%DATADIR%%/test/data/mw1.dat %%DATADIR%%/test/data/mw2.dat %%DATADIR%%/test/data/mw3.dat %%DATADIR%%/test/data/paamir.pep %%DATADIR%%/test/data/pax6_cdna.fasta %%DATADIR%%/test/data/prot.acedb %%DATADIR%%/test/data/prot.codata %%DATADIR%%/test/data/prot.fasta %%DATADIR%%/test/data/prot.gcg %%DATADIR%%/test/data/prot.gcg8 %%DATADIR%%/test/data/prot.ig %%DATADIR%%/test/data/prot.m-acedb %%DATADIR%%/test/data/prot.m-codata %%DATADIR%%/test/data/prot.m-fasta %%DATADIR%%/test/data/prot.m-nbrf %%DATADIR%%/test/data/prot.m-ncbi %%DATADIR%%/test/data/prot.m-swiss %%DATADIR%%/test/data/prot.nbrf %%DATADIR%%/test/data/prot.ncbi %%DATADIR%%/test/data/prot.swiss %%DATADIR%%/test/data/prot.text %%DATADIR%%/test/data/z83307.seq %%DATADIR%%/test/data/aligna.dna %%DATADIR%%/test/data/alignapart.dna %%DATADIR%%/test/data/alignb.dna %%DATADIR%%/test/data/aligna.prot %%DATADIR%%/test/data/alignapart.prot %%DATADIR%%/test/data/alignb.prot %%DATADIR%%/test/data/tranalign.pep %%DATADIR%%/test/data/tranalign.seq %%DATADIR%%/test/embl/acnum.hit %%DATADIR%%/test/embl/acnum.trg %%DATADIR%%/test/embl/division.lkp %%DATADIR%%/test/embl/entrynam.idx %%DATADIR%%/test/embl/seqvn.hit %%DATADIR%%/test/embl/seqvn.trg %%DATADIR%%/test/embl/des.hit %%DATADIR%%/test/embl/des.trg %%DATADIR%%/test/embl/keyword.hit %%DATADIR%%/test/embl/keyword.trg %%DATADIR%%/test/embl/taxon.hit %%DATADIR%%/test/embl/taxon.trg %%DATADIR%%/test/embl/est.dat %%DATADIR%%/test/embl/fun.dat %%DATADIR%%/test/embl/hum1.dat %%DATADIR%%/test/embl/inv.dat %%DATADIR%%/test/embl/pln.dat %%DATADIR%%/test/embl/pro.dat %%DATADIR%%/test/embl/rod.dat %%DATADIR%%/test/embl/sts.dat %%DATADIR%%/test/embl/vrl.dat %%DATADIR%%/test/embl/vrt.dat %%DATADIR%%/test/genbank/acnum.hit %%DATADIR%%/test/genbank/acnum.trg %%DATADIR%%/test/genbank/division.lkp %%DATADIR%%/test/genbank/entrynam.idx %%DATADIR%%/test/genbank/seqvn.hit %%DATADIR%%/test/genbank/seqvn.trg %%DATADIR%%/test/genbank/des.hit %%DATADIR%%/test/genbank/des.trg %%DATADIR%%/test/genbank/keyword.hit %%DATADIR%%/test/genbank/keyword.trg %%DATADIR%%/test/genbank/taxon.hit %%DATADIR%%/test/genbank/taxon.trg %%DATADIR%%/test/genbank/gbbct1.seq %%DATADIR%%/test/genbank/gbest1.seq %%DATADIR%%/test/genbank/gbinv1.seq %%DATADIR%%/test/genbank/gbpln1.seq %%DATADIR%%/test/genbank/gbpln2.seq %%DATADIR%%/test/genbank/gbpri1.seq %%DATADIR%%/test/genbank/gbrod1.seq %%DATADIR%%/test/genbank/gbsts1.seq %%DATADIR%%/test/genbank/gbvrl1.seq %%DATADIR%%/test/genbank/gbvrt.seq %%DATADIR%%/test/gb/acnum.hit %%DATADIR%%/test/gb/acnum.trg %%DATADIR%%/test/gb/division.lkp %%DATADIR%%/test/gb/entrynam.idx %%DATADIR%%/test/gb/seqvn.hit %%DATADIR%%/test/gb/seqvn.trg %%DATADIR%%/test/gb/des.hit %%DATADIR%%/test/gb/des.trg %%DATADIR%%/test/gb/keyword.hit %%DATADIR%%/test/gb/keyword.trg %%DATADIR%%/test/gb/taxon.hit %%DATADIR%%/test/gb/taxon.trg %%DATADIR%%/test/gb/ba.ref %%DATADIR%%/test/gb/ba.seq %%DATADIR%%/test/gb/htg.ref %%DATADIR%%/test/gb/htg.seq %%DATADIR%%/test/pir/acnum.hit %%DATADIR%%/test/pir/acnum.trg %%DATADIR%%/test/pir/division.lkp %%DATADIR%%/test/pir/entrynam.idx %%DATADIR%%/test/pir/des.hit %%DATADIR%%/test/pir/des.trg %%DATADIR%%/test/pir/keyword.hit %%DATADIR%%/test/pir/keyword.trg %%DATADIR%%/test/pir/taxon.hit %%DATADIR%%/test/pir/taxon.trg %%DATADIR%%/test/pir/pir1.header %%DATADIR%%/test/pir/pir1.names %%DATADIR%%/test/pir/pir1.numbers %%DATADIR%%/test/pir/pir1.offset %%DATADIR%%/test/pir/pir1.ref %%DATADIR%%/test/pir/pir1.seq %%DATADIR%%/test/pir/pir2.header %%DATADIR%%/test/pir/pir2.names %%DATADIR%%/test/pir/pir2.numbers %%DATADIR%%/test/pir/pir2.offset %%DATADIR%%/test/pir/pir2.ref %%DATADIR%%/test/pir/pir2.seq %%DATADIR%%/test/pir/pir3.header %%DATADIR%%/test/pir/pir3.names %%DATADIR%%/test/pir/pir3.numbers %%DATADIR%%/test/pir/pir3.offset %%DATADIR%%/test/pir/pir3.ref %%DATADIR%%/test/pir/pir3.seq %%DATADIR%%/test/pir/pir4.header %%DATADIR%%/test/pir/pir4.names %%DATADIR%%/test/pir/pir4.numbers %%DATADIR%%/test/pir/pir4.offset %%DATADIR%%/test/pir/pir4.ref %%DATADIR%%/test/pir/pir4.seq %%DATADIR%%/test/swiss/seq.dat %%DATADIR%%/test/swiss/acnum.hit %%DATADIR%%/test/swiss/acnum.trg %%DATADIR%%/test/swiss/division.lkp %%DATADIR%%/test/swiss/entrynam.idx %%DATADIR%%/test/swiss/seqvn.hit %%DATADIR%%/test/swiss/seqvn.trg %%DATADIR%%/test/swiss/des.hit %%DATADIR%%/test/swiss/des.trg %%DATADIR%%/test/swiss/keyword.hit %%DATADIR%%/test/swiss/keyword.trg %%DATADIR%%/test/swiss/taxon.hit %%DATADIR%%/test/swiss/taxon.trg %%DATADIR%%/test/swnew/acnum.hit %%DATADIR%%/test/swnew/acnum.trg %%DATADIR%%/test/swnew/division.lkp %%DATADIR%%/test/swnew/entrynam.idx %%DATADIR%%/test/swnew/seqvn.hit %%DATADIR%%/test/swnew/seqvn.trg %%DATADIR%%/test/swnew/des.hit %%DATADIR%%/test/swnew/des.trg %%DATADIR%%/test/swnew/keyword.hit %%DATADIR%%/test/swnew/keyword.trg %%DATADIR%%/test/swnew/taxon.hit %%DATADIR%%/test/swnew/taxon.trg %%DATADIR%%/test/swnew/new_seq.dat %%DATADIR%%/test/swnew/upd_ann.dat %%DATADIR%%/test/swnew/upd_seq.dat %%DATADIR%%/test/wormpep/wormpep %%DATADIR%%/test/wormpep/acnum.hit %%DATADIR%%/test/wormpep/acnum.trg %%DATADIR%%/test/wormpep/division.lkp %%DATADIR%%/test/wormpep/entrynam.idx %%DATADIR%%/test/wormpep/des.hit %%DATADIR%%/test/wormpep/des.trg %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/filetree/DragTree.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/filetree/FileEditorDisplay.PopupListener.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/filetree/FileEditorDisplay.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/filetree/FileNode.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/filetree/FileSaving.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form/BuildJembossForm.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form/ListFilePanel.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form/SectionPanel.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form/SetInFileCard.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form/SetOutFileCard.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form/TextFieldFloat.DecimalNumberDocument.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form/TextFieldFloat.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form/TextFieldInt.WholeNumberDocument.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form/TextFieldInt.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form/TextFieldSink.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form/JembossComboPopup.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form/JembossComboPopup.myComboUI.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/sequenceChooser/CutNPasteTextArea.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/sequenceChooser/FileChooser.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/sequenceChooser/InputSequenceAttributes.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/sequenceChooser/OutputSequenceAttributes.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/sequenceChooser/SequenceFilter.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/sequenceChooser/TextAreaSink.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/startup/Database.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/startup/ProgList.HorizontalMenu.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/startup/ProgList.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/startup/Splash.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/BuildProgramMenu.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/ResultsMenuBar.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/SetUpMenuBar.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/ShowResultSet.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/ShowSavedResults.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/SwingWorker.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/parser/acd/ApplicationFields.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/parser/acd/ApplicationParam.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/parser/AcdFunResolve.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/parser/AcdVarResolve.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/parser/Ajax.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/parser/Dependent.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/parser/ParseAcd.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/programs/JembossProcess.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/programs/ListFile.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/programs/ResultList.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/programs/RunEmbossApplication.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/soap/AuthPopup.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/soap/CallAjax.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/soap/GetWossname.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/soap/JembossRun.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/soap/JembossSoapException.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/soap/PendingResults.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/soap/PrivateRequest.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/soap/ResListView.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/Jemboss.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/Jemboss.winExit.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/JembossLogo.html %%DATADIR%%/jemboss/api/org/emboss/jemboss/JembossParams.html %%DATADIR%%/jemboss/api/allclasses-frame.html %%DATADIR%%/jemboss/api/deprecated-list.html %%DATADIR%%/jemboss/api/getClasses.pl %%DATADIR%%/jemboss/api/help-doc.html %%DATADIR%%/jemboss/api/index-all.html %%DATADIR%%/jemboss/api/index.html %%DATADIR%%/jemboss/api/makeDocs.csh %%DATADIR%%/jemboss/api/overview-tree.html %%DATADIR%%/jemboss/api/package-list %%DATADIR%%/jemboss/api/packages.html %%DATADIR%%/jemboss/api/serialized-form.html %%DATADIR%%/jemboss/api/stylesheet.css %%DATADIR%%/jemboss/images/Backward_arrow_button.gif %%DATADIR%%/jemboss/images/Forward_arrow_button.gif %%DATADIR%%/jemboss/images/Go_button.gif %%DATADIR%%/jemboss/images/Information_button.gif %%DATADIR%%/jemboss/images/Jemboss_logo_greyback.gif %%DATADIR%%/jemboss/images/Jemboss_logo_large.gif %%DATADIR%%/jemboss/images/Jemboss_logo_small.gif %%DATADIR%%/jemboss/images/Job_manager_button.gif %%DATADIR%%/jemboss/images/Refresh_button.gif %%DATADIR%%/jemboss/images/Refresh_button2.gif %%DATADIR%%/jemboss/lib/axis/axis-ant.jar %%DATADIR%%/jemboss/lib/axis/axis.jar %%DATADIR%%/jemboss/lib/axis/commons-discovery.jar %%DATADIR%%/jemboss/lib/axis/commons-logging.jar %%DATADIR%%/jemboss/lib/axis/jaxrpc.jar %%DATADIR%%/jemboss/lib/axis/log4j-1.2.8.jar %%DATADIR%%/jemboss/lib/axis/saaj.jar %%DATADIR%%/jemboss/lib/axis/servlet.jar %%DATADIR%%/jemboss/lib/axis/wsdl4j.jar %%DATADIR%%/jemboss/lib/README %%DATADIR%%/jemboss/lib/activation.jar %%DATADIR%%/jemboss/lib/jakarta-regexp-1.2.jar %%DATADIR%%/jemboss/lib/mail.jar %%DATADIR%%/jemboss/lib/xerces.jar %%DATADIR%%/jemboss/lib/jalview.jar %%DATADIR%%/jemboss/lib/JembossPrintAlignment.jar %%DATADIR%%/jemboss/lib/grout.jar %%DATADIR%%/jemboss/org/emboss/jemboss/editor/AlignApplet.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/GroutSequenceJPanel.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/AlignJFrame.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/Matrix.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/ColourJFrame.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/MatrixJFrame.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/ColourMenu.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/PatternJFrame.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/ColourPanel.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/PlotConsensus.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/Consensus.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/PrettyPlotJFrame.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/ConsensusOptions.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/PrintAlignmentImage.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/GraphicSequenceCollection.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/PrintAlignment.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/Paste.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/GroutAlignJFrameEvent.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/Sequence.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/GroutAlignJFrame.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/SequenceJPanel.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/GroutAlignJFrameListener.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/SequenceNameJButton.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/GroutGraphicSequenceCollectionEvent.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/SequenceProperties.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/GroutGraphicSequenceCollection.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/SequenceReader.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/GroutGraphicSequenceCollectionListener.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/SequenceSaver.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/GroutSequence.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/IDTableJFrame.java %%DATADIR%%/jemboss/org/emboss/jemboss/editor/PrintableJTable.java %%DATADIR%%/jemboss/org/emboss/jemboss/draw/Block.java %%DATADIR%%/jemboss/org/emboss/jemboss/draw/PrintDNAImage.java %%DATADIR%%/jemboss/org/emboss/jemboss/draw/DNADraw.java %%DATADIR%%/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme.java %%DATADIR%%/jemboss/org/emboss/jemboss/draw/EmbossCirdnaReader.java %%DATADIR%%/jemboss/org/emboss/jemboss/draw/Ticks.java %%DATADIR%%/jemboss/org/emboss/jemboss/draw/GeneticMarker.java %%DATADIR%%/jemboss/org/emboss/jemboss/draw/Wizard.java %%DATADIR%%/jemboss/org/emboss/jemboss/draw/LineAttribute.java %%DATADIR%%/jemboss/org/emboss/jemboss/graphics/Graph2DPlot.java %%DATADIR%%/jemboss/org/emboss/jemboss/graphics/PrintPlot.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/filetree/DragTree.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/filetree/FileEditorDisplay.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/filetree/FileNode.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/filetree/FileSave.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/filetree/FileSaving.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/filetree/RemoteDragTree.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/filetree/RemoteFileNode.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/filetree/RemoteFileTreePanel.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/filetree/LocalAndRemoteFileTreeFrame.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/filetree/LocalTreeToolBar.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/BuildJembossForm.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/ListFilePanel.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/SectionPanel.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/SetInFileCard.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/SetOutFileCard.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/TextFieldFloat.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/TextFieldInt.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/TextFieldSink.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/JembossComboPopup.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/MultiLineToolTipUI.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/PlafMacros.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/ReportFormat.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/AlignFormat.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/ApplicationNamePanel.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/LabelTextBox.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form/Separator.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/sequenceChooser/CutNPasteTextArea.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/sequenceChooser/FileChooser.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/sequenceChooser/InputSequenceAttributes.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/sequenceChooser/OutputSequenceAttributes.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/sequenceChooser/SequenceFilter.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/sequenceChooser/TextAreaSink.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/startup/Database.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/startup/ProgList.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/AdvancedOptions.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/ResultsMenuBar.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/ShowResultSet.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/BuildProgramMenu.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/SequenceData.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/ShowSavedResults.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/LaunchJalView.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/SequenceList.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/SwingWorker.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/MemoryComboBox.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/SetUpMenuBar.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/Browser.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/SplashThread.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/ScrollPanel.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/ImageIconJPanel.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/Favorites.java %%DATADIR%%/jemboss/org/emboss/jemboss/gui/KeywordSearch.java %%DATADIR%%/jemboss/org/emboss/jemboss/parser/acd/ApplicationFields.java %%DATADIR%%/jemboss/org/emboss/jemboss/parser/acd/ApplicationParam.java %%DATADIR%%/jemboss/org/emboss/jemboss/parser/AcdFunResolve.java %%DATADIR%%/jemboss/org/emboss/jemboss/parser/AcdVariableResolve.java %%DATADIR%%/jemboss/org/emboss/jemboss/parser/AcdVarResolve.java %%DATADIR%%/jemboss/org/emboss/jemboss/parser/Ajax.java %%DATADIR%%/jemboss/org/emboss/jemboss/parser/AjaxUtil.java %%DATADIR%%/jemboss/org/emboss/jemboss/parser/Dependent.java %%DATADIR%%/jemboss/org/emboss/jemboss/parser/ParseAcd.java %%DATADIR%%/jemboss/org/emboss/jemboss/programs/BatchUpdateTimer.java %%DATADIR%%/jemboss/org/emboss/jemboss/programs/JembossProcess.java %%DATADIR%%/jemboss/org/emboss/jemboss/programs/ListFile.java %%DATADIR%%/jemboss/org/emboss/jemboss/programs/ResultList.java %%DATADIR%%/jemboss/org/emboss/jemboss/programs/ResultsUpdateTimer.java %%DATADIR%%/jemboss/org/emboss/jemboss/programs/RunEmbossApplication.java %%DATADIR%%/jemboss/org/emboss/jemboss/programs/RunEmbossApplication2.java %%DATADIR%%/jemboss/org/emboss/jemboss/server/JembossServer.java %%DATADIR%%/jemboss/org/emboss/jemboss/server/JembossFileServer.java %%DATADIR%%/jemboss/org/emboss/jemboss/server/JembossThread.java %%DATADIR%%/jemboss/org/emboss/jemboss/server/JembossAuthServer.java %%DATADIR%%/jemboss/org/emboss/jemboss/server/JembossFileAuthServer.java %%DATADIR%%/jemboss/org/emboss/jemboss/server/TestPublicServer.java %%DATADIR%%/jemboss/org/emboss/jemboss/server/TestPrivateServer.java %%DATADIR%%/jemboss/org/emboss/jemboss/server/AppendToLogFileThread.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/AuthPopup.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/JembossSoapException.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/CallAjax.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/PendingResults.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/GetWossname.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/PrivateRequest.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/JembossRun.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/ServerSetup.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/FileRoots.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/FileList.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/PublicRequest.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/GetACD.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/GetHelp.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/ShowDB.java %%DATADIR%%/jemboss/org/emboss/jemboss/soap/MakeFileSafe.java %%DATADIR%%/jemboss/org/emboss/jemboss/Jemboss.java %%DATADIR%%/jemboss/org/emboss/jemboss/JembossLogo.java %%DATADIR%%/jemboss/org/emboss/jemboss/JembossParams.java %%DATADIR%%/jemboss/org/emboss/jemboss/JembossJarUtil.java %%DATADIR%%/jemboss/resources/jemboss.properties %%DATADIR%%/jemboss/resources/readme.html %%DATADIR%%/jemboss/resources/readmeAlign.html %%DATADIR%%/jemboss/resources/readmeDNADraw.html %%DATADIR%%/jemboss/resources/results.html %%DATADIR%%/jemboss/resources/version %%DATADIR%%/jemboss/resources/filemgr.html %%DATADIR%%/jemboss/resources/seqList.html %%DATADIR%%/jemboss/utils/install-jemboss-server.sh %%DATADIR%%/jemboss/utils/keys.sh %%DATADIR%%/jemboss/utils/makeJar.csh %%DATADIR%%/jemboss/utils/makeJNLP.sh %%DATADIR%%/jemboss/utils/makeFileManagerJNLP.sh %%DATADIR%%/jemboss/utils/template.html %%DATADIR%%/jemboss/utils/README %%DATADIR%%/jemboss/LICENSE %%DATADIR%%/jemboss/readme.html %%DATADIR%%/jemboss/runJemboss.sh %%DATADIR%%/jemboss/README %%PORTDOCS%%@dirrm %%DOCSDIR%%/manuals %%PORTDOCS%%@dirrm %%DOCSDIR%%/programs/html %%PORTDOCS%%@dirrm %%DOCSDIR%%/programs/text %%PORTDOCS%%@dirrm %%DOCSDIR%%/programs %%PORTDOCS%%@dirrm %%DOCSDIR%%/tutorials %%PORTDOCS%%@dirrm %%DOCSDIR%% @dirrm %%DATADIR%%/acd @dirrm %%DATADIR%%/data/AAINDEX @dirrm %%DATADIR%%/data/CODONS @dirrm %%DATADIR%%/data/REBASE @dirrm %%DATADIR%%/data/PRINTS @dirrm %%DATADIR%%/data/PROSITE @dirrmtry %%DATADIR%%/data @dirrm %%DATADIR%%/test/data @dirrm %%DATADIR%%/test/embl @dirrm %%DATADIR%%/test/genbank @dirrm %%DATADIR%%/test/gb @dirrm %%DATADIR%%/test/pir @dirrm %%DATADIR%%/test/swiss @dirrm %%DATADIR%%/test/swnew @dirrm %%DATADIR%%/test/wormpep @dirrm %%DATADIR%%/test @dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/filetree @dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form @dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/sequenceChooser @dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/startup @dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui @dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/parser/acd @dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/parser @dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/programs @dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/soap @dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss @dirrm %%DATADIR%%/jemboss/api/org/emboss @dirrm %%DATADIR%%/jemboss/api/org @dirrm %%DATADIR%%/jemboss/api @dirrm %%DATADIR%%/jemboss/images @dirrm %%DATADIR%%/jemboss/lib/axis @dirrm %%DATADIR%%/jemboss/lib @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/editor @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/draw @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/graphics @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/gui/filetree @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/gui/sequenceChooser @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/gui/startup @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/gui @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/parser/acd @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/parser @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/programs @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/server @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/soap @dirrm %%DATADIR%%/jemboss/org/emboss/jemboss @dirrm %%DATADIR%%/jemboss/org/emboss @dirrm %%DATADIR%%/jemboss/org @dirrm %%DATADIR%%/jemboss/resources @dirrm %%DATADIR%%/jemboss/utils @dirrm %%DATADIR%%/jemboss @dirrmtry %%DATADIR%% @dirrmtry bin @dirrmtry include @dirrmtry lib @dirrmtry share/doc @dirrmtry share