bin/aaindexextract
bin/abiview
bin/acdc
bin/acdpretty
bin/acdtable
bin/acdtrace
bin/acdvalid
bin/aligncopy
bin/aligncopypair
bin/antigenic
bin/backtranambig
bin/backtranseq
bin/banana
bin/biosed
bin/btwisted
bin/cai
bin/chaos
bin/charge
bin/checktrans
bin/chips
bin/cirdna
bin/codcmp
bin/codcopy
bin/coderet
bin/compseq
bin/cons
bin/consambig
bin/cpgplot
bin/cpgreport
bin/cusp
bin/cutgextract
bin/cutseq
bin/dan
bin/dbiblast
bin/dbifasta
bin/dbiflat
bin/dbigcg
bin/dbxfasta
bin/dbxflat
bin/dbxgcg
bin/degapseq
bin/density
bin/descseq
bin/diffseq
bin/digest
bin/distmat
bin/dotmatcher
bin/dotpath
bin/dottup
bin/dreg
bin/edialign
bin/einverted
bin/embossdata
bin/embossversion
bin/emma
bin/emowse
bin/entret
bin/epestfind
bin/eprimer3
bin/equicktandem
bin/est2genome
bin/etandem
bin/extractalign
bin/extractfeat
bin/extractseq
bin/featcopy
bin/featreport
bin/findkm
bin/freak
bin/fuzznuc
bin/fuzzpro
bin/fuzztran
bin/garnier
bin/geecee
bin/getorf
bin/helixturnhelix
bin/hmoment
bin/iep
bin/infoalign
bin/infobase
bin/inforesidue
bin/infoseq
bin/isochore
bin/jaspextract
bin/jaspscan
bin/jembossctl
bin/lindna
bin/listor
bin/makenucseq
bin/makeprotseq
bin/marscan
bin/maskambignuc
bin/maskambigprot
bin/maskfeat
bin/maskseq
bin/matcher
bin/megamerger
bin/merger
bin/msbar
bin/mwcontam
bin/mwfilter
bin/needle
bin/needleall
bin/newcpgreport
bin/newcpgseek
bin/newseq
bin/nohtml
bin/noreturn
bin/nospace
bin/notab
bin/notseq
bin/nthseq
bin/nthseqset
bin/octanol
bin/oddcomp
bin/palindrome
bin/pasteseq
bin/patmatdb
bin/patmatmotifs
bin/pepcoil
bin/pepinfo
bin/pepnet
bin/pepstats
bin/pepwheel
bin/pepwindow
bin/pepwindowall
bin/plotcon
bin/plotorf
bin/polydot
bin/preg
bin/prettyplot
bin/prettyseq
bin/primersearch
bin/printsextract
bin/profit
bin/prophecy
bin/prophet
bin/prosextract
bin/pscan
bin/psiphi
bin/rebaseextract
bin/recoder
bin/redata
bin/remap
bin/restover
bin/restrict
bin/revseq
bin/runJemboss.csh
bin/seealso
bin/seqmatchall
bin/seqret
bin/seqretsetall
bin/seqretsplit
bin/showalign
bin/showdb
bin/showfeat
bin/showorf
bin/showpep
bin/showseq
bin/shuffleseq
bin/sigcleave
bin/silent
bin/sirna
bin/sixpack
bin/sizeseq
bin/skipredundant
bin/skipseq
bin/splitsource
bin/splitter
bin/stretcher
bin/stssearch
bin/supermatcher
bin/syco
bin/tcode
bin/textsearch
bin/tfextract
bin/tfm
bin/tfscan
bin/tmap
bin/tranalign
bin/transeq
bin/trimest
bin/trimseq
bin/trimspace
bin/twofeat
bin/union
bin/vectorstrip
bin/water
bin/whichdb
bin/wobble
bin/wordcount
bin/wordfinder
bin/wordmatch
bin/wossname
bin/yank
include/ajacd.h
include/ajalign.h
include/ajarch.h
include/ajarr.h
include/ajassert.h
include/ajax.h
include/ajbase.h
include/ajcall.h
include/ajcod.h
include/ajdan.h
include/ajdefine.h
include/ajdmx.h
include/ajdom.h
include/ajdomain.h
include/ajexcept.h
include/ajfeat.h
include/ajfeatdata.h
include/ajfile.h
include/ajfiledata.h
include/ajfileio.h
include/ajfmt.h
include/ajgraph.h
include/ajgraphstruct.h
include/ajhist.h
include/ajindex.h
include/ajjava.h
include/ajlist.h
include/ajmath.h
include/ajmatrices.h
include/ajmem.h
include/ajmess.h
include/ajnam.h
include/ajnexus.h
include/ajpat.h
include/ajpdb.h
include/ajpdbio.h
include/ajphylo.h
include/ajrange.h
include/ajreg.h
include/ajreport.h
include/ajseq.h
include/ajseqabi.h
include/ajseqdata.h
include/ajseqdb.h
include/ajseqread.h
include/ajseqtype.h
include/ajseqwrite.h
include/ajsort.h
include/ajsql.h
include/ajstr.h
include/ajsys.h
include/ajtable.h
include/ajtime.h
include/ajtranslate.h
include/ajtree.h
include/ajutil.h
include/ajvector.h
include/crc32.h
include/deflate.h
include/embaln.h
include/embcom.h
include/embcons.h
include/embdata.h
include/embdbi.h
include/embdmx.h
include/embdomain.h
include/embest.h
include/embexit.h
include/embgroup.h
include/embiep.h
include/embindex.h
include/embinit.h
include/embmat.h
include/embmisc.h
include/embmol.h
include/embnmer.h
include/emboss.h
include/embpat.h
include/embpatlist.h
include/embpdb.h
include/embprop.h
include/embread.h
include/embshow.h
include/embsig.h
include/embword.h
include/ensanalysis.h
include/ensassemblyexception.h
include/ensassembly.h
include/ensassemblymapper.h
include/ensattribute.h
include/ensbaseadaptor.h
include/enscache.h
include/enscoordsystem.h
include/ensdatabaseadaptor.h
include/ensdatabaseconnection.h
include/ensdatabaseentry.h
include/ensdata.h
include/ensdensity.h
include/ensditag.h
include/ensembl.h
include/ensexon.h
include/ensexternaldatabase.h
include/ensfeature.h
include/ensgene.h
include/ensgvdata.h
include/ensgvindividual.h
include/ensgvpopulation.h
include/ensgvsample.h
include/ensintron.h
include/enskaryotype.h
include/ensmapper.h
include/ensmarker.h
include/ensmetacoordinate.h
include/ensmetainformation.h
include/ensmiscellaneous.h
include/ensprediction.h
include/ensprojectionsegment.h
include/ensqcalignment.h
include/ensqcdatabase.h
include/ensqc.h
include/ensqcsequence.h
include/ensregistry.h
include/ensrepeat.h
include/ensseqregion.h
include/enssequence.h
include/enssequenceedit.h
include/ensslice.h
include/ensstorable.h
include/enstable.h
include/enstranslation.h
include/enstranscript.h
include/ensutility.h
include/ensvariation.h
include/eplplot/disptab.h
include/eplplot/drivers.h
include/eplplot/metadefs.h
include/eplplot/pdf.h
include/eplplot/plConfig.h
include/eplplot/plDevs.h
include/eplplot/plcore.h
include/eplplot/pldebug.h
include/eplplot/pldll.h
include/eplplot/plevent.h
include/eplplot/plfci-type1.h
include/eplplot/plhershey-unicode.h
include/eplplot/plplot.h
include/eplplot/plplotP.h
include/eplplot/plstrm.h
include/eplplot/plunicode-type1.h
include/eplplot/plxwd.h
include/eplplot/ps.h
include/expat.h
include/expat_external.h
include/expatemboss.h
include/inffast.h
include/inffixed.h
include/inflate.h
include/inftrees.h
include/pcre.h
include/pcre_config.h
include/pcreemboss.h
include/pcre_internal.h
include/pcre_printint.src
include/pcreposix.h
include/trees.h
include/ucp.h
include/zconf.h
include/zlibemboss.h
include/zlib.h
include/zutil.h
lib/libacd.so.6
lib/libacd.so
lib/libacd.la
lib/libacd.a
lib/libajax.a
lib/libajax.la
lib/libajax.so
lib/libajax.so.6
lib/libajaxdb.a
lib/libajaxdb.la
lib/libajaxdb.so
lib/libajaxdb.so.6
lib/libajaxg.a
lib/libajaxg.la
lib/libajaxg.so
lib/libajaxg.so.6
lib/libeexpat.a
lib/libeexpat.la
lib/libeexpat.so
lib/libeexpat.so.2
lib/libensembl.a
lib/libensembl.la
lib/libensembl.so
lib/libensembl.so.6
lib/libepcre.a
lib/libepcre.la
lib/libepcre.so
lib/libepcre.so.7
lib/libeplplot.a
lib/libeplplot.la
lib/libeplplot.so
lib/libeplplot.so.5
lib/libezlib.a
lib/libezlib.la
lib/libezlib.so
lib/libezlib.so.2
lib/libnucleus.a
lib/libnucleus.la
lib/libnucleus.so
lib/libnucleus.so.6
%%DATADIR%%/acd/aaindexextract.acd
%%DATADIR%%/acd/abiview.acd
%%DATADIR%%/acd/acdc.acd
%%DATADIR%%/acd/acdlog.acd
%%DATADIR%%/acd/acdpretty.acd
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%%DATADIR%%/acd/distmat.acd
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%%DATADIR%%/acd/dottup.acd
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%%DATADIR%%/acd/emma.acd
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%%DATADIR%%/acd/entrails.acd
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%%DATADIR%%/acd/epestfind.acd
%%DATADIR%%/acd/eprimer3.acd
%%DATADIR%%/acd/equicktandem.acd
%%DATADIR%%/acd/est2genome.acd
%%DATADIR%%/acd/etandem.acd
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%%DATADIR%%/acd/needleall.acd
%%DATADIR%%/acd/newcoils.acd
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%%DATADIR%%/acd/pepwheel.acd
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%%DATADIR%%/test/pir/pir2.seq
%%DATADIR%%/test/pir/pir3.header
%%DATADIR%%/test/pir/pir3.names
%%DATADIR%%/test/pir/pir3.numbers
%%DATADIR%%/test/pir/pir3.offset
%%DATADIR%%/test/pir/pir3.ref
%%DATADIR%%/test/pir/pir3.seq
%%DATADIR%%/test/pir/pir4.header
%%DATADIR%%/test/pir/pir4.names
%%DATADIR%%/test/pir/pir4.numbers
%%DATADIR%%/test/pir/pir4.offset
%%DATADIR%%/test/pir/pir4.ref
%%DATADIR%%/test/pir/pir4.seq
%%DATADIR%%/test/pir/taxon.hit
%%DATADIR%%/test/pir/taxon.trg
%%DATADIR%%/test/swiss/acnum.hit
%%DATADIR%%/test/swiss/acnum.trg
%%DATADIR%%/test/swiss/des.hit
%%DATADIR%%/test/swiss/des.trg
%%DATADIR%%/test/swiss/division.lkp
%%DATADIR%%/test/swiss/entrynam.idx
%%DATADIR%%/test/swiss/keyword.hit
%%DATADIR%%/test/swiss/keyword.trg
%%DATADIR%%/test/swiss/seq.dat
%%DATADIR%%/test/swiss/seqvn.hit
%%DATADIR%%/test/swiss/seqvn.trg
%%DATADIR%%/test/swiss/taxon.hit
%%DATADIR%%/test/swiss/taxon.trg
%%DATADIR%%/test/swnew/acnum.hit
%%DATADIR%%/test/swnew/acnum.trg
%%DATADIR%%/test/swnew/des.hit
%%DATADIR%%/test/swnew/des.trg
%%DATADIR%%/test/swnew/division.lkp
%%DATADIR%%/test/swnew/entrynam.idx
%%DATADIR%%/test/swnew/keyword.hit
%%DATADIR%%/test/swnew/keyword.trg
%%DATADIR%%/test/swnew/seqvn.hit
%%DATADIR%%/test/swnew/seqvn.trg
%%DATADIR%%/test/swnew/taxon.hit
%%DATADIR%%/test/swnew/taxon.trg
%%DATADIR%%/test/swnew/trembl.dat
%%DATADIR%%/test/testdb/acnum.hit
%%DATADIR%%/test/testdb/acnum.trg
%%DATADIR%%/test/testdb/des.hit
%%DATADIR%%/test/testdb/des.trg
%%DATADIR%%/test/testdb/division.lkp
%%DATADIR%%/test/testdb/entrynam.idx
%%DATADIR%%/test/testdb/testdb.fasta
@dirrm bin
@dirrm include/eplplot
@dirrm include
@dirrm lib
@dirrm %%DATADIR%%/acd
@dirrm %%DATADIR%%/data/AAINDEX
@dirrm %%DATADIR%%/data/CODONS
@dirrm %%DATADIR%%/data/JASPAR_CNE
@dirrm %%DATADIR%%/data/JASPAR_CORE
@dirrm %%DATADIR%%/data/JASPAR_FAM
@dirrm %%DATADIR%%/data/JASPAR_PHYLOFACTS
@dirrm %%DATADIR%%/data/JASPAR_POLII
@dirrm %%DATADIR%%/data/JASPAR_SPLICE
@dirrm %%DATADIR%%/data/PRINTS
@dirrm %%DATADIR%%/data/PROSITE
@dirrm %%DATADIR%%/data/REBASE
@dirrm %%DATADIR%%/data
@dirrm %%DOCSDIR%%/manuals
@dirrm %%DOCSDIR%%/programs/html
@dirrm %%DOCSDIR%%/programs/text
@dirrm %%DOCSDIR%%/programs
@dirrm %%DOCSDIR%%/tutorials
@dirrm %%DOCSDIR%%
@dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/filetree
@dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/form
@dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/sequenceChooser
@dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui/startup
@dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/gui
@dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/parser/acd
@dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/parser
@dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/programs
@dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss/soap
@dirrm %%DATADIR%%/jemboss/api/org/emboss/jemboss
@dirrm %%DATADIR%%/jemboss/api/org/emboss
@dirrm %%DATADIR%%/jemboss/api/org
@dirrm %%DATADIR%%/jemboss/api
@dirrm %%DATADIR%%/jemboss/images
@dirrm %%DATADIR%%/jemboss/lib/axis
@dirrm %%DATADIR%%/jemboss/lib
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/draw
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/editor
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/graphics
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/gui/filetree
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/gui/form
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/gui/sequenceChooser
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/gui/startup
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/gui
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/parser/acd
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/parser
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/programs
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/server
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss/soap
@dirrm %%DATADIR%%/jemboss/org/emboss/jemboss
@dirrm %%DATADIR%%/jemboss/org/emboss
@dirrm %%DATADIR%%/jemboss/org
@dirrm %%DATADIR%%/jemboss/resources
@dirrm %%DATADIR%%/jemboss/utils
@dirrm %%DATADIR%%/jemboss
@dirrm %%DATADIR%%/test/data
@dirrm %%DATADIR%%/test/embl
@dirrm %%DATADIR%%/test/genbank
@dirrm %%DATADIR%%/test/pir
@dirrm %%DATADIR%%/test/swiss
@dirrm %%DATADIR%%/test/swnew
@dirrm %%DATADIR%%/test/testdb
@dirrm %%DATADIR%%/test
@dirrm %%DATADIR%%
@dirrmtry share