bin/aaindexextract
bin/abiview
bin/acdc
bin/acdpretty
bin/acdtable
bin/acdtrace
bin/acdvalid
bin/antigenic
bin/backtranseq
bin/banana
bin/biosed
bin/btwisted
bin/cai
bin/chaos
bin/charge
bin/checktrans
bin/chips
bin/cirdna
bin/codcmp
bin/coderet
bin/compseq
bin/cons
bin/cpgplot
bin/cpgreport
bin/cusp
bin/cutgextract
bin/cutseq
bin/dan
bin/dbiblast
bin/dbifasta
bin/dbiflat
bin/dbigcg
bin/degapseq
bin/descseq
bin/diffseq
bin/digest
bin/distmat
bin/dotmatcher
bin/dotpath
bin/dottup
bin/dreg
bin/einverted
bin/embossdata
bin/embossversion
bin/emma
bin/emowse
bin/entret
bin/epestfind
bin/eprimer3
bin/equicktandem
bin/est2genome
bin/etandem
bin/extractfeat
bin/extractseq
bin/findkm
bin/freak
bin/fuzznuc
bin/fuzzpro
bin/fuzztran
bin/garnier
bin/geecee
bin/getorf
bin/helixturnhelix
bin/hmoment
bin/iep
bin/infoalign
bin/infoseq
bin/isochore
bin/jembossctl
bin/lindna
bin/listor
bin/marscan
bin/maskfeat
bin/maskseq
bin/matcher
bin/megamerger
bin/merger
bin/msbar
bin/mwcontam
bin/mwfilter
bin/needle
bin/newcpgreport
bin/newcpgseek
bin/newseq
bin/notseq
bin/noreturn
bin/nthseq
bin/octanol
bin/oddcomp
bin/palindrome
bin/pasteseq
bin/patmatdb
bin/patmatmotifs
bin/pepcoil
bin/pepinfo
bin/pepnet
bin/pepstats
bin/pepwheel
bin/pepwindow
bin/pepwindowall
bin/plotcon
bin/plotorf
bin/polydot
bin/preg
bin/prettyplot
bin/prettyseq
bin/primersearch
bin/printsextract
bin/profit
bin/prophecy
bin/prophet
bin/prosextract
bin/pscan
bin/psiphi
bin/rebaseextract
bin/recoder
bin/redata
bin/remap
bin/restover
bin/restrict
bin/revseq
bin/seealso
bin/seqmatchall
bin/seqret
bin/seqretsplit
bin/showalign
bin/showdb
bin/showfeat
bin/showorf
bin/showseq
bin/shuffleseq
bin/sigcleave
bin/silent
bin/sirna
bin/sixpack
bin/skipseq
bin/splitter
bin/stretcher
bin/stssearch
bin/supermatcher
bin/syco
bin/tcode
bin/textsearch
bin/tfextract
bin/tfm
bin/tfscan
bin/tmap
bin/tranalign
bin/transeq
bin/trimest
bin/trimseq
bin/twofeat
bin/union
bin/vectorstrip
bin/water
bin/whichdb
bin/wobble
bin/wordcount
bin/wordmatch
bin/wossname
bin/yank
bin/runJemboss.csh
etc/emboss.default.sample
include/drivers.h
include/pdf.h
include/plcore.h
include/plevent.h
include/plplotP.h
include/plxwd.h
include/metadefs.h
include/plConfig.h
include/pldebug.h
include/plplot.h
include/plstrm.h
include/plDevs.h
include/ajax.h
include/ajarch.h
include/ajdefine.h
include/ajacd.h
include/ajalign.h
include/ajarr.h
include/ajassert.h
include/ajbase.h
include/ajcall.h
include/ajcod.h
include/ajdan.h
include/ajdmx.h
include/ajdomain.h
include/ajexcept.h
include/ajfeat.h
include/ajfeatdata.h
include/ajfile.h
include/ajfmt.h
include/ajgraph.h
include/ajgraphxml.h
include/ajgraphstruct.h
include/ajhist.h
include/ajjava.h
include/ajlist.h
include/ajmath.h
include/ajmatrices.h
include/ajmem.h
include/ajmess.h
include/ajnam.h
include/ajnexus.h
include/ajpdb.h
include/ajpdbio.h
include/ajphylo.h
include/ajrange.h
include/ajreg.h
include/ajreport.h
include/ajseq.h
include/ajseqabi.h
include/ajseqdata.h
include/ajseqdb.h
include/ajseqread.h
include/ajseqtype.h
include/ajseqwrite.h
include/ajsort.h
include/ajstr.h
include/ajsys.h
include/ajtable.h
include/ajtime.h
include/ajtranslate.h
include/ajtree.h
include/ajutil.h
include/ajvector.h
include/pcre.h
include/pcre_chartables.c
include/pcre_config.h
include/pcre_get.c
include/pcre_printint.c
include/pcre_internal.h
include/pcreposix.h
include/emboss.h
include/embaln.h
include/embcom.h
include/embcons.h
include/embdata.h
include/embdbi.h
include/embdmx.h
include/embest.h
include/embexit.h
include/embgotoh.h
include/embgroup.h
include/embiep.h
include/embindex.h
include/embinit.h
include/embmat.h
include/embmisc.h
include/embmol.h
include/embnmer.h
include/embpat.h
include/embprop.h
include/embpdb.h
include/embdomain.h
include/embsig.h
include/embread.h
include/embshow.h
include/embword.h
lib/libplplot.so.5
lib/libplplot.so
lib/libplplot.a
lib/libajax.so.1
lib/libajax.so
lib/libajax.a
lib/libajaxg.so.1
lib/libajaxg.so
lib/libajaxg.a
lib/libnucleus.so.1
lib/libnucleus.so
lib/libnucleus.a
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@dirrm %%DATADIR%%/data/AAINDEX
@dirrm %%DATADIR%%/data/CODONS
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