include/pbcopper/PbcopperConfig.h
include/pbcopper/PbcopperMakeUnique.h
include/pbcopper/align/Seed.h
include/pbcopper/align/Seeds.h
include/pbcopper/align/internal/Seed-inl.h
include/pbcopper/align/internal/Seeds-inl.h
include/pbcopper/cli/CLI.h
include/pbcopper/cli/HelpPrinter.h
include/pbcopper/cli/Interface.h
include/pbcopper/cli/Option.h
include/pbcopper/cli/OptionFlags.h
include/pbcopper/cli/Parser.h
include/pbcopper/cli/PositionalArg.h
include/pbcopper/cli/Results.h
include/pbcopper/cli/SingleDashMode.h
include/pbcopper/cli/VersionPrinter.h
include/pbcopper/cli/internal/Option-inl.h
include/pbcopper/cli/toolcontract/Config.h
include/pbcopper/cli/toolcontract/Driver.h
include/pbcopper/cli/toolcontract/InputFileType.h
include/pbcopper/cli/toolcontract/JsonPrinter.h
include/pbcopper/cli/toolcontract/OutputFileType.h
include/pbcopper/cli/toolcontract/ResolvedToolContract.h
include/pbcopper/cli/toolcontract/ResourceType.h
include/pbcopper/cli/toolcontract/Task.h
include/pbcopper/cli/toolcontract/TaskType.h
include/pbcopper/cli/toolcontract/internal/Driver-inl.h
include/pbcopper/cli/toolcontract/internal/InputFileType-inl.h
include/pbcopper/cli/toolcontract/internal/OutputFileType-inl.h
include/pbcopper/cli/toolcontract/internal/Task-inl.h
include/pbcopper/data/CCSTag.h
include/pbcopper/data/Cigar.h
include/pbcopper/data/CigarOperation.h
include/pbcopper/data/Interval.h
include/pbcopper/data/MovieName.h
include/pbcopper/data/Position.h
include/pbcopper/data/RSMovieName.h
include/pbcopper/data/RSReadName.h
include/pbcopper/data/ReadName.h
include/pbcopper/data/Zmw.h
include/pbcopper/data/internal/CigarOperation-inl.h
include/pbcopper/data/internal/Interval-inl.h
include/pbcopper/data/internal/MovieName-inl.h
include/pbcopper/data/internal/RSMovieName-inl.h
include/pbcopper/data/internal/ReadNameBase-inl.h
include/pbcopper/data/internal/ReadNameBase.h
include/pbcopper/json/JSON.h
include/pbcopper/json/internal/json.hpp
include/pbcopper/logging/Logging.h
include/pbcopper/logging/internal/Logging-inl.h
include/pbcopper/parallel/FireAndForget.h
include/pbcopper/parallel/WorkQueue.h
include/pbcopper/qgram/Index.h
include/pbcopper/qgram/IndexHit.h
include/pbcopper/qgram/IndexHits.h
include/pbcopper/qgram/internal/Hashing-inl.h
include/pbcopper/qgram/internal/Index-inl.h
include/pbcopper/stream/Stream.h
include/pbcopper/utility/CallbackTimer.h
include/pbcopper/utility/EnumClassHash.h
include/pbcopper/utility/FileUtils.h
include/pbcopper/utility/MoveAppend.h
include/pbcopper/utility/PbcopperVersion.h
include/pbcopper/utility/SafeSubtract.h
include/pbcopper/utility/Stopwatch.h
include/pbcopper/utility/StringUtils.h
include/pbcopper/utility/SystemInfo.h
include/pbcopper/utility/Unused.h
include/pbcopper/utility/internal/CallbackTimer-inl.h
include/pbcopper/utility/internal/FileUtils-inl.h
include/pbcopper/utility/internal/Stopwatch-inl.h
include/pbcopper/utility/internal/StringUtils-inl.h
include/pbcopper/utility/internal/SystemInfo-inl.h
lib/libpbcopper.so
lib/libpbcopper.so.0
lib/libpbcopper.so.0.4
lib/libpbcopper.so.0.4.1
libdata/pkgconfig/pbcopper.pc