bin/t_coffee %%PORTDOCS%%%%DOCSDIR%%/README4T-COFFEE %%PORTDOCS%%%%DOCSDIR%%/aln_compare.doc.txt %%PORTDOCS%%%%DOCSDIR%%/seq_reformat.doc.txt %%PORTDOCS%%%%DOCSDIR%%/t_coffee.pdf %%PORTDOCS%%%%DOCSDIR%%/t_coffee_doc.doc %%PORTDOCS%%%%DOCSDIR%%/t_coffee_doc.pdf %%PORTDOCS%%%%DOCSDIR%%/t_coffee_doc.txt %%EXAMPLESDIR%%/3d.fasta %%EXAMPLESDIR%%/3d_sample2.fasta %%EXAMPLESDIR%%/3d_sample3.fasta %%EXAMPLESDIR%%/clustalw_method.tc_method %%EXAMPLESDIR%%/command_line.txt %%EXAMPLESDIR%%/error_report.T-COFFEE.3752 %%EXAMPLESDIR%%/sample_aln1.aln %%EXAMPLESDIR%%/sample_aln1.fasta %%EXAMPLESDIR%%/sample_aln1.tc_lib %%EXAMPLESDIR%%/sample_aln1_1.aln %%EXAMPLESDIR%%/sample_aln1_2.aln %%EXAMPLESDIR%%/sample_aln2.aln %%EXAMPLESDIR%%/sample_aln2.fasta %%EXAMPLESDIR%%/sample_aln2.msf %%EXAMPLESDIR%%/sample_aln3.aln %%EXAMPLESDIR%%/sample_aln4.aln %%EXAMPLESDIR%%/sample_dnaseq1.fasta %%EXAMPLESDIR%%/struc1.pdb %%EXAMPLESDIR%%/sample_lib1.mocca_lib %%EXAMPLESDIR%%/sample_lib1.tc_lib %%EXAMPLESDIR%%/sample_lib2.tc_lib %%EXAMPLESDIR%%/sample_lib3.tc_lib %%EXAMPLESDIR%%/sample_lib4.tc_lib02 %%EXAMPLESDIR%%/sample_list1.lib_list %%EXAMPLESDIR%%/sample_param_file.param %%EXAMPLESDIR%%/sample_profile1.aln %%EXAMPLESDIR%%/sample_profile2.aln %%EXAMPLESDIR%%/sample_seq1.aln %%EXAMPLESDIR%%/sample_seq1.fasta %%EXAMPLESDIR%%/sample_seq2.fasta %%EXAMPLESDIR%%/sample_seq3.fasta %%EXAMPLESDIR%%/sample_seq4.fasta %%EXAMPLESDIR%%/sample_seq5.fasta %%EXAMPLESDIR%%/sample_tree.dnd %%EXAMPLESDIR%%/struc2.pdb %%EXAMPLESDIR%%/struc3.pdb %%EXAMPLESDIR%%/struc4.pdb %%EXAMPLESDIR%%/t_coffee.log %%EXAMPLESDIR%%/template_file.template %%EXAMPLESDIR%%/test.lib %%EXAMPLESDIR%%/test.tc_lib %%EXAMPLESDIR%%/test_lib.tc_lib %%DATADIR%%/license.txt %%DATADIR%%/html/t_coffee.html %%DATADIR%%/html/t_coffee4html.cgi @dirrmtry %%DOCSDIR%% @dirrmtry %%EXAMPLESDIR%% @dirrm %%DATADIR%%/html @dirrmtry %%DATADIR%%