/biology/
../
Makefile
abyss
artemis
avida
babel
bamtools
bcftools
bedtools
biococoa
bolt-lmm
bowtie
bowtie2
bwa
canu
cd-hit
cdbfasta
checkm
clustal-omega
clustalw
consed
cufflinks
cytoscape
ddocent
diamond
dsr-pdb
emboss
exonerate
fasta
fasta3
fastahack
fastdnaml
fastool
fastp
fastqc
fasttree
fastx-toolkit
figtree
fluctuate
freebayes
garlic
gatk
gemma
gff2ps
gmap
gperiodic
graphlan
grappa
groopm
haplohseq
hhsuite
hisat2
hmmer
htslib
hyphy
igv
infernal
iolib
iqtree
jalview
jellyfish
kallisto
lagan
lamarc
libbigwig
libgtextutils
libsbml
mafft
mapm3
migrate
minimap2
molden
mopac
mothur
mrbayes
mummer
muscle
ncbi-blast+
ncbi-cxx-toolkit
ncbi-toolkit
ngs-sdk
p5-AcePerl
p5-Bio-ASN1-EntrezGene
p5-Bio-Cluster
p5-Bio-Coordinate
p5-Bio-DB-EMBL
p5-Bio-DB-NCBIHelper
p5-Bio-Das-Lite
p5-Bio-Das
p5-Bio-FeatureIO
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics
p5-Bio-MAGETAB
p5-Bio-NEXUS
p5-Bio-Phylo
p5-Bio-SCF
p5-Bio-Variation
p5-BioPerl-Run
p5-BioPerl
p5-TrimGalore
p5-transdecoder
paml
pbbam
pbcopper
pbseqan
pear-merger
phrap
phred
phylip
phyml
plinkseq
primer3
prodigal
prodigy-lig
protomol
psi88
py-Genesis-PyAPI
py-biom-format
py-biopython
py-bx-python
py-cutadapt
py-dnaio
py-fastTSNE
py-gffutils
py-gtfparse
py-loompy
py-macs2
py-multiqc
py-orange3-bioinformatics
py-orange3-single-cell
py-pyfaidx
py-pysam
py-xenaPython
pyfasta
python-nexus
rainbow
recombine
ruby-bio
rubygem-bio
samtools
seaview
seqan-apps
seqan
seqan1
seqio
seqtk
seqtools
sim4
slclust
smithwaterman
stacks
star
stringtie
tRNAscan-SE
t_coffee
tabixpp
tophat
treekin
treepuzzle
trimadap
trimmomatic
ugene
vcflib
vcftools
velvet
viennarna
vsearch
wise