# Created by: Jason W. Bacon # $FreeBSD$ ############################################################################ # http://www.neuro.mcw.edu/Ports has the latest source distribution from # which this port is built. It will be updated as time permits. # # afni.nimh.nih.gov is the ultimate source for AFNI, and will always # contain the latest source release. If this port is not up to date, # you can download the latest sources and build manually. PORTNAME= afni PORTVERSION= 2012.04.17.2129 PORTREVISION= 6 CATEGORIES= science biology graphics MASTER_SITES= http://personalpages.tds.net/~jwbacon/Ports/distfiles/AFNI/${PORTVERSION}/ \ http://www.acadix.biz/Ports/distfiles/AFNI/${PORTVERSION}/ DISTFILES= afni_src.tgz afni.1 3dClustBust.c \ TTatlas+tlrc.BRIK.gz TTatlas+tlrc.HEAD CA_EZ_v1.5-July3107.tgz DIST_SUBDIR= AFNI-${PORTVERSION} EXTRACT_ONLY= afni_src.tgz CA_EZ_v1.5-July3107.tgz MAINTAINER= jwbacon@tds.net COMMENT= Advanced Functional Neuro Imaging LIB_DEPENDS= R:${PORTSDIR}/math/R \ gsl:${PORTSDIR}/math/gsl RUN_DEPENDS= cjpeg:${PORTSDIR}/graphics/jpeg \ mpeg_encode:${PORTSDIR}/multimedia/mpeg_encode \ whirlgif:${PORTSDIR}/graphics/whirlgif \ ppmtogif:${PORTSDIR}/graphics/netpbm \ endian:${PORTSDIR}/sysutils/endian USES= gettext iconv gmake motif NO_STAGE= yes .include .if ${ARCH} == "sparc64" BROKEN= Does not compile on sparc64: "undefined reference to '_mcount'" .endif USE_GL= glw glu USE_XORG= xi MAKE_ENV= CC="${CC}" MAKE_JOBS_UNSAFE=yes WRKSRC= ${WRKDIR}/afni_src ALL_TARGET= vastness suma ########################################################################### # Install parameters MAN1= afni.1 SUB_FILES= pkg-message afni.cshrc afni.profile INSTALL_WRKSRC= ${WRKSRC}/BSD STAGE= ${WRKSRC}/stage X11R6_FILES= coxplot/Makefile \ coxplot/Makefile.f2c \ 3DEdge/src/Makefile \ SUMA/SUMA_Makefile \ edt_blur.c \ suma_datasets.c \ SUMA/SUMA_Load_Surface_Object.c \ SUMA/SUMA_MiscFunc.c \ SUMA/SUMA_ParseCommands.c \ SUMA/GLUT/libglut/glut_event.c \ SUMA/SUMA_Surface_IO.c post-extract: @${CP} -f ${FILESDIR}/Makefile.FreeBSD_PORT ${WRKSRC}/Makefile .for f in ${X11R6_FILES} @${REINPLACE_CMD} -e 's|/usr/X11R6|$${LOCALBASE}|g' ${WRKSRC}/${f} .endfor @${REINPLACE_CMD} -E 's|AFNI_[0-9_]+|${PORTVERSION}|g' ${WRKSRC}/AFNI_label.h @${CP} ${DISTDIR}/${DIST_SUBDIR}/afni.1 ${WRKDIR} @${CP} ${DISTDIR}/${DIST_SUBDIR}/3dClustBust.c ${WRKSRC} @${REINPLACE_CMD} "s|%%PREFIX%%|${PREFIX}|g" ${WRKDIR}/afni.1 post-build: ${MKDIR} ${STAGE}/bin \ ${STAGE}/scripts \ ${STAGE}/lib \ ${STAGE}/include \ ${STAGE}/trash \ ${STAGE}/doc \ ${STAGE}/share ${MV} ${INSTALL_WRKSRC}/libf2c.a \ ${STAGE}/trash ${MV} ${INSTALL_WRKSRC}/*.a \ ${INSTALL_WRKSRC}/*.so \ ${STAGE}/lib ${MV} ${INSTALL_WRKSRC}/funstuff \ ${INSTALL_WRKSRC}/AFNI.*rc \ ${INSTALL_WRKSRC}/afnigui* \ ${STAGE}/share ${MV} ${INSTALL_WRKSRC}/*.h \ ${STAGE}/include ${MV} ${INSTALL_WRKSRC}/README* \ ${STAGE}/doc ${MV} ${INSTALL_WRKSRC}/abut ${INSTALL_WRKSRC}/afni_abut ${MV} ${INSTALL_WRKSRC}/qhull ${INSTALL_WRKSRC}/afni_qhull for binary in `${FILE} ${INSTALL_WRKSRC}/* | fgrep 'ELF' | ${AWK} -F ':' ' { print $$1 }'` ; do \ ${MV} $${binary} ${STAGE}/bin ; \ done ${MV} ${INSTALL_WRKSRC}/* \ ${STAGE}/scripts do-install: ${MKDIR} ${DATADIR} ${PREFIX}/lib/afni ${PREFIX}/include/afni ${INSTALL_DATA} ${STAGE}/lib/* ${PREFIX}/lib/afni ${INSTALL_DATA} ${STAGE}/include/* ${PREFIX}/include/afni ${CP} -R ${STAGE}/share/* ${DATADIR} ${INSTALL_PROGRAM} ${STAGE}/bin/* ${PREFIX}/bin ${INSTALL_SCRIPT} ${STAGE}/scripts/* ${PREFIX}/bin ${INSTALL_DATA} ${DISTDIR}/${DIST_SUBDIR}/TTatlas* ${DATADIR} ${INSTALL_DATA} ${WRKDIR}/CA_EZ_v1.5-July3107/* ${DATADIR} ${INSTALL_MAN} ${WRKDIR}/afni.1 ${MAN1PREFIX}/man/man1 .if !defined(NOPORTDOCS) ${MKDIR} ${DOCSDIR} ${PREFIX}/etc/mri ${INSTALL_DATA} ${STAGE}/doc/* ${DOCSDIR} ${INSTALL_SCRIPT} ${WRKDIR}/afni.cshrc ${WRKDIR}/afni.profile \ ${PREFIX}/etc/mri .endif post-install: @${CAT} ${WRKDIR}/pkg-message .include