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include/gromacs/3dview.h
include/gromacs/assert.h
include/gromacs/atomprop.h
include/gromacs/bondf.h
include/gromacs/calcgrid.h
include/gromacs/calch.h
include/gromacs/calcmu.h
include/gromacs/centerofmass.h
include/gromacs/chargegroup.h
include/gromacs/checkpoint.h
include/gromacs/confio.h
include/gromacs/constr.h
include/gromacs/copyrite.h
include/gromacs/coulomb.h
include/gromacs/dihre.h
include/gromacs/displacement.h
include/gromacs/disre.h
include/gromacs/do_fit.h
include/gromacs/domdec.h
include/gromacs/domdec_network.h
include/gromacs/ebin.h
include/gromacs/edsam.h
include/gromacs/enxio.h
include/gromacs/ffscanf.h
include/gromacs/filenm.h
include/gromacs/force.h
include/gromacs/futil.h
include/gromacs/gbutil.h
include/gromacs/gen_ad.h
include/gromacs/genborn.h
include/gromacs/gmx_ana.h
include/gromacs/gmx_arpack.h
include/gromacs/gmx_blas.h
include/gromacs/gmx_cyclecounter.h
include/gromacs/gmx_fatal.h
include/gromacs/gmx_fft.h
include/gromacs/gmx_ga2la.h
include/gromacs/gmx_lapack.h
include/gromacs/gmx_matrix.h
include/gromacs/gmx_parallel_3dfft.h
include/gromacs/gmx_random.h
include/gromacs/gmx_sort.h
include/gromacs/gmx_sse2_double.h
include/gromacs/gmx_sse2_single.h
include/gromacs/gmx_statistics.h
include/gromacs/gmx_system_xdr.h
include/gromacs/gmx_wallcycle.h
include/gromacs/gmxcomplex.h
include/gromacs/gmxcpp.h
include/gromacs/gmxfio.h
include/gromacs/gpp_atomtype.h
include/gromacs/gpp_nextnb.h
include/gromacs/grompp.h
include/gromacs/gstat.h
include/gromacs/hackblock.h
include/gromacs/histogram.h
include/gromacs/index.h
include/gromacs/indexutil.h
include/gromacs/inputrec.h
include/gromacs/invblock.h
include/gromacs/macros.h
include/gromacs/magic.h
include/gromacs/main.h
include/gromacs/mainpage.h
include/gromacs/maths.h
include/gromacs/matio.h
include/gromacs/md5.h
include/gromacs/mdatoms.h
include/gromacs/mdebin.h
include/gromacs/mdrun.h
include/gromacs/molfile_plugin.h
include/gromacs/mpelogging.h
include/gromacs/mshift.h
include/gromacs/mtop_util.h
include/gromacs/mtxio.h
include/gromacs/mvdata.h
include/gromacs/names.h
include/gromacs/nbsearch.h
include/gromacs/network.h
include/gromacs/nonbonded.h
include/gromacs/nrama.h
include/gromacs/nrjac.h
include/gromacs/nrnb.h
include/gromacs/ns.h
include/gromacs/nsgrid.h
include/gromacs/oenv.h
include/gromacs/orires.h
include/gromacs/partdec.h
include/gromacs/pbc.h
include/gromacs/pdb2top.h
include/gromacs/pdbio.h
include/gromacs/perf_est.h
include/gromacs/physics.h
include/gromacs/pme.h
include/gromacs/poscalc.h
include/gromacs/position.h
include/gromacs/pppm.h
include/gromacs/princ.h
include/gromacs/pull.h
include/gromacs/qmmm.h
include/gromacs/random.h
include/gromacs/rbin.h
include/gromacs/rdgroup.h
include/gromacs/readinp.h
include/gromacs/resall.h
include/gromacs/rmpbc.h
include/gromacs/selection.h
include/gromacs/selmethod.h
include/gromacs/selparam.h
include/gromacs/selvalue.h
include/gromacs/sfactor.h
include/gromacs/shellfc.h
include/gromacs/shift.h
include/gromacs/sighandler.h
include/gromacs/smalloc.h
include/gromacs/sortwater.h
include/gromacs/sparsematrix.h
include/gromacs/split.h
include/gromacs/splitter.h
include/gromacs/statutil.h
include/gromacs/strdb.h
include/gromacs/string2.h
include/gromacs/symtab.h
include/gromacs/sysstuff.h
include/gromacs/tgroup.h
include/gromacs/thread_mpi.h
include/gromacs/thread_mpi/atomic.h
include/gromacs/thread_mpi/atomic/cycles.h
include/gromacs/thread_mpi/atomic/gcc.h
include/gromacs/thread_mpi/atomic/gcc_ia64.h
include/gromacs/thread_mpi/atomic/gcc_intrinsics.h
include/gromacs/thread_mpi/atomic/gcc_ppc.h
include/gromacs/thread_mpi/atomic/gcc_spinlock.h
include/gromacs/thread_mpi/atomic/gcc_x86.h
include/gromacs/thread_mpi/atomic/msvc.h
include/gromacs/thread_mpi/atomic/xlc_ppc.h
include/gromacs/thread_mpi/barrier.h
include/gromacs/thread_mpi/collective.h
include/gromacs/thread_mpi/event.h
include/gromacs/thread_mpi/list.h
include/gromacs/thread_mpi/lock.h
include/gromacs/thread_mpi/mpi_bindings.h
include/gromacs/thread_mpi/numa_malloc.h
include/gromacs/thread_mpi/threads.h
include/gromacs/thread_mpi/tmpi.h
include/gromacs/thread_mpi/wait.h
include/gromacs/tmpi.h
include/gromacs/topsort.h
include/gromacs/toputil.h
include/gromacs/tpxio.h
include/gromacs/trajana.h
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include/gromacs/txtdump.h
include/gromacs/typedefs.h
include/gromacs/types/atoms.h
include/gromacs/types/block.h
include/gromacs/types/commrec.h
include/gromacs/types/constr.h
include/gromacs/types/energy.h
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include/gromacs/types/filenm.h
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include/gromacs/types/matrix.h
include/gromacs/types/mdatom.h
include/gromacs/types/nblist.h
include/gromacs/types/nlistheuristics.h
include/gromacs/types/nrnb.h
include/gromacs/types/ns.h
include/gromacs/types/nsgrid.h
include/gromacs/types/oenv.h
include/gromacs/types/pbc.h
include/gromacs/types/qmmmrec.h
include/gromacs/types/shellfc.h
include/gromacs/types/simple.h
include/gromacs/types/state.h
include/gromacs/types/symtab.h
include/gromacs/types/topology.h
include/gromacs/types/trx.h
include/gromacs/update.h
include/gromacs/vcm.h
include/gromacs/vec.h
include/gromacs/viewit.h
include/gromacs/vmddlopen.h
include/gromacs/vmdio.h
include/gromacs/vmdplugin.h
include/gromacs/vsite.h
include/gromacs/warninp.h
include/gromacs/wgms.h
include/gromacs/wman.h
include/gromacs/writeps.h
include/gromacs/xdrf.h
include/gromacs/xtcio.h
include/gromacs/xvgr.h
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%%DATADIR%%/top/ions.itp
%%DATADIR%%/top/links.dat
%%DATADIR%%/top/oplsaa.ff/1propanol.itp
%%DATADIR%%/top/oplsaa.ff/aminoacids.c.tdb
%%DATADIR%%/top/oplsaa.ff/aminoacids.hdb
%%DATADIR%%/top/oplsaa.ff/aminoacids.n.tdb
%%DATADIR%%/top/oplsaa.ff/aminoacids.r2b
%%DATADIR%%/top/oplsaa.ff/aminoacids.rtp
%%DATADIR%%/top/oplsaa.ff/aminoacids.vsd
%%DATADIR%%/top/oplsaa.ff/atomname2type.n2t
%%DATADIR%%/top/oplsaa.ff/atomtypes.atp
%%DATADIR%%/top/oplsaa.ff/ethanol.itp
%%DATADIR%%/top/oplsaa.ff/ffbonded.itp
%%DATADIR%%/top/oplsaa.ff/ffnonbonded.itp
%%DATADIR%%/top/oplsaa.ff/forcefield.doc
%%DATADIR%%/top/oplsaa.ff/forcefield.itp
%%DATADIR%%/top/oplsaa.ff/gbsa.itp
%%DATADIR%%/top/oplsaa.ff/ions.itp
%%DATADIR%%/top/oplsaa.ff/methanol.itp
%%DATADIR%%/top/oplsaa.ff/spc.itp
%%DATADIR%%/top/oplsaa.ff/spce.itp
%%DATADIR%%/top/oplsaa.ff/tip3p.itp
%%DATADIR%%/top/oplsaa.ff/tip4p.itp
%%DATADIR%%/top/oplsaa.ff/tip5p.itp
%%DATADIR%%/top/oplsaa.ff/watermodels.dat
%%DATADIR%%/top/phbres.dat
%%DATADIR%%/top/ps.m2p
%%DATADIR%%/top/random.dat
%%DATADIR%%/top/refi_aa.dat
%%DATADIR%%/top/residuetypes.dat
%%DATADIR%%/top/sfactor.dat
%%DATADIR%%/top/spc.itp
%%DATADIR%%/top/spc216.gro
%%DATADIR%%/top/spce.itp
%%DATADIR%%/top/specbond.dat
%%DATADIR%%/top/ss.map
%%DATADIR%%/top/surface.dat
%%DATADIR%%/top/sw.itp
%%DATADIR%%/top/table6-10.xvg
%%DATADIR%%/top/table6-11.xvg
%%DATADIR%%/top/table6-12.xvg
%%DATADIR%%/top/table6-8.xvg
%%DATADIR%%/top/table6-9.xvg
%%DATADIR%%/top/tip3p.itp
%%DATADIR%%/top/tip4p.gro
%%DATADIR%%/top/tip4p.itp
%%DATADIR%%/top/tip5p.gro
%%DATADIR%%/top/vdwradii.dat
%%DATADIR%%/top/xlateat.dat
%%DATADIR%%/tutor/gmxdemo/cpeptide.pdb
%%DATADIR%%/tutor/gmxdemo/demo
%%DATADIR%%/tutor/methanol/conf.gro
%%DATADIR%%/tutor/methanol/grompp.mdp
%%DATADIR%%/tutor/methanol/index.ndx
%%DATADIR%%/tutor/methanol/methanol.itp
%%DATADIR%%/tutor/methanol/methanol.pdb
%%DATADIR%%/tutor/methanol/topol.top
%%DATADIR%%/tutor/mixed/conf.gro
%%DATADIR%%/tutor/mixed/grompp.mdp
%%DATADIR%%/tutor/mixed/index.ndx
%%DATADIR%%/tutor/mixed/mixed.pdb
%%DATADIR%%/tutor/mixed/topol.top
%%DATADIR%%/tutor/nmr1/conf.gro
%%DATADIR%%/tutor/nmr1/grompp.mdp
%%DATADIR%%/tutor/nmr1/pep.pdb
%%DATADIR%%/tutor/nmr1/topol.top
%%DATADIR%%/tutor/nmr2/conf.gro
%%DATADIR%%/tutor/nmr2/genconf.gcp
%%DATADIR%%/tutor/nmr2/grompp.mdp
%%DATADIR%%/tutor/nmr2/pep.pdb
%%DATADIR%%/tutor/nmr2/topol.top
%%DATADIR%%/tutor/speptide/em.mdp
%%DATADIR%%/tutor/speptide/full.mdp
%%DATADIR%%/tutor/speptide/pr.mdp
%%DATADIR%%/tutor/speptide/speptide.pdb
%%DATADIR%%/tutor/water/conf.gro
%%DATADIR%%/tutor/water/grompp.mdp
%%DATADIR%%/tutor/water/index.ndx
%%DATADIR%%/tutor/water/spc216.pdb
%%DATADIR%%/tutor/water/topol.top
@dirrm %%DATADIR%%/tutor/water
@dirrm %%DATADIR%%/tutor/speptide
@dirrm %%DATADIR%%/tutor/nmr2
@dirrm %%DATADIR%%/tutor/nmr1
@dirrm %%DATADIR%%/tutor/mixed
@dirrm %%DATADIR%%/tutor/methanol
@dirrm %%DATADIR%%/tutor/gmxdemo
@dirrm %%DATADIR%%/tutor
@dirrm %%DATADIR%%/top/oplsaa.ff
@dirrm %%DATADIR%%/top/gromos53a6.ff
@dirrm %%DATADIR%%/top/gromos53a5.ff
@dirrm %%DATADIR%%/top/gromos45a3.ff
@dirrm %%DATADIR%%/top/gromos43a2.ff
@dirrm %%DATADIR%%/top/gromos43a1.ff
@dirrm %%DATADIR%%/top/gmx2.ff
@dirrm %%DATADIR%%/top/gmx.ff
@dirrm %%DATADIR%%/top/encadv.ff
@dirrm %%DATADIR%%/top/encads.ff
@dirrm %%DATADIR%%/top/charmm27.ff
@dirrm %%DATADIR%%/top/amberGS.ff
@dirrm %%DATADIR%%/top/amber99sb.ff
@dirrm %%DATADIR%%/top/amber99sb-ildn.ff
@dirrm %%DATADIR%%/top/amber99.ff
@dirrm %%DATADIR%%/top/amber96.ff
@dirrm %%DATADIR%%/top/amber94.ff
@dirrm %%DATADIR%%/top/amber03.ff
@dirrm %%DATADIR%%/top
@dirrm %%DATADIR%%/template
@dirrm %%DATADIR%%/html/online
@dirrm %%DATADIR%%/html/images
@dirrm %%DATADIR%%/html
@dirrm %%DATADIR%%
@dirrm include/gromacs/types
@dirrm include/gromacs/thread_mpi/atomic
@dirrm include/gromacs/thread_mpi
@dirrm include/gromacs