biology - ports - FreeBSD ports tree

Mode	Name	Size
-rw-r--r--	Makefile	5785	log plain blame
d---------	abyss	178	log plain
d---------	ad2vcf	109	log plain
d---------	artemis	146	log plain
d---------	atac-seq	109	log plain
d---------	augustus	178	log plain
d---------	avida	141	log plain
d---------	babel	141	log plain
d---------	bamtools	178	log plain
d---------	bamutil	141	log plain
d---------	barrnap	146	log plain
d---------	bbmap	178	log plain
d---------	bcftools	178	log plain
d---------	bedtools	178	log plain
d---------	bfc	141	log plain
d---------	bio-mocha	178	log plain
d---------	bioawk	141	log plain
d---------	biococoa	146	log plain
d---------	biolibc-tools	146	log plain
d---------	biolibc	146	log plain
d---------	bioparser	146	log plain
d---------	biosig	178	log plain
d---------	biosoup	109	log plain
d---------	biostar-tools	180	log plain
d---------	bolt-lmm	178	log plain
d---------	bowtie	178	log plain
d---------	bowtie2	178	log plain
d---------	bwa	141	log plain
d---------	canu	178	log plain
d---------	cd-hit	178	log plain
d---------	cdbfasta	141	log plain
d---------	checkm	109	log plain
d---------	clustal-omega	146	log plain
d---------	clustalw	141	log plain
d---------	cufflinks	141	log plain
d---------	cytoscape	109	log plain
d---------	ddocent	178	log plain
d---------	diamond	109	log plain
d---------	dsr-pdb	178	log plain
d---------	edlib	146	log plain
d---------	emboss	178	log plain
d---------	erminej	178	log plain
d---------	exonerate	146	log plain
d---------	fasda	146	log plain
d---------	fasta	178	log plain
d---------	fasta3	178	log plain
d---------	fastahack	178	log plain
d---------	fastdnaml	146	log plain
d---------	fastool	109	log plain
d---------	fastp	141	log plain
d---------	fastq-trim	146	log plain
d---------	fastqc	146	log plain
d---------	fasttree	141	log plain
d---------	fastx-toolkit	178	log plain
d---------	figtree	109	log plain
d---------	flash	141	log plain
d---------	fluctuate	141	log plain
d---------	freebayes	141	log plain
d---------	garlic	178	log plain
d---------	gatk	141	log plain
d---------	gcta	141	log plain
d---------	gemma	178	log plain
d---------	generand	109	log plain
d---------	gff2ps	109	log plain
d---------	gffread	141	log plain
d---------	gmap	185	log plain
d---------	gperiodic	146	log plain
d---------	graphlan	146	log plain
d---------	groopm	141	log plain
d---------	haplohseq	178	log plain
d---------	hhsuite	178	log plain
d---------	hisat2	178	log plain
d---------	hmmer	185	log plain
d---------	htslib	178	log plain
d---------	hyphy	146	log plain
d---------	igv	178	log plain
d---------	infernal	146	log plain
d---------	iolib	178	log plain
d---------	iqtree	141	log plain
d---------	jalview	141	log plain
d---------	jellyfish	178	log plain
d---------	kallisto	141	log plain
d---------	kmcp	109	log plain
d---------	lamarc	141	log plain
d---------	libbigwig	141	log plain
d---------	libcombine	178	log plain
d---------	libgff	146	log plain
d---------	libgtextutils	178	log plain
d---------	libneurosim	146	log plain
d---------	libnuml	146	log plain
d---------	libsbml	178	log plain
d---------	libsedml	146	log plain
d---------	linux-foldingathome	178	log plain
d---------	mafft	178	log plain
d---------	mapm3	178	log plain
d---------	megahit	178	log plain
d---------	metaeuk	109	log plain
d---------	migrate	178	log plain
d---------	minimap2	178	log plain
d---------	mmseqs2	180	log plain
d---------	molden	141	log plain
d---------	mothur	141	log plain
d---------	mrbayes	185	log plain
d---------	mummer	178	log plain
d---------	muscle	141	log plain
d---------	ncbi-blast+	178	log plain
d---------	ncbi-cxx-toolkit	141	log plain
d---------	ncbi-entrez-direct	178	log plain
d---------	ncbi-toolkit	178	log plain
d---------	ncbi-vdb	178	log plain
d---------	ngs-sdk	178	log plain
d---------	p5-AcePerl	178	log plain
d---------	p5-Bio-ASN1-EntrezGene	146	log plain
d---------	p5-Bio-Cluster	146	log plain
d---------	p5-Bio-Coordinate	146	log plain
d---------	p5-Bio-DB-EMBL	146	log plain
d---------	p5-Bio-DB-NCBIHelper	146	log plain
d---------	p5-Bio-Das-Lite	146	log plain
d---------	p5-Bio-Das	146	log plain
d---------	p5-Bio-FeatureIO	146	log plain
d---------	p5-Bio-GFF3	146	log plain
d---------	p5-Bio-Glite	146	log plain
d---------	p5-Bio-Graphics	146	log plain
d---------	p5-Bio-MAGETAB	146	log plain
d---------	p5-Bio-NEXUS	146	log plain
d---------	p5-Bio-Phylo	146	log plain
d---------	p5-Bio-SCF	146	log plain
d---------	p5-Bio-Variation	146	log plain
d---------	p5-BioPerl-Run	178	log plain
d---------	p5-BioPerl	146	log plain
d---------	p5-TrimGalore	178	log plain
d---------	p5-transdecoder	146	log plain
d---------	paml	146	log plain
d---------	pbbam	178	log plain
d---------	pbseqan	146	log plain
d---------	peak-classifier	146	log plain
d---------	pear-merger	109	log plain
d---------	phrap	178	log plain
d---------	phred	141	log plain
d---------	phyml	141	log plain
d---------	picard-tools	141	log plain
d---------	plink	178	log plain
d---------	pooler	109	log plain
d---------	primer3	141	log plain
d---------	prodigal	109	log plain
d---------	prodigy-lig	109	log plain
d---------	protomol	178	log plain
d---------	psi88	141	log plain
d---------	py-Genesis-PyAPI	109	log plain
d---------	py-PySCeS	109	log plain
d---------	py-bcbio-gff	109	log plain
d---------	py-biom-format	109	log plain
d---------	py-biopython	109	log plain
d---------	py-biosig	109	log plain
d---------	py-bx-python	109	log plain
d---------	py-crossmap	141	log plain
d---------	py-cutadapt	109	log plain
d---------	py-deeptools	109	log plain
d---------	py-deeptoolsintervals	141	log plain
d---------	py-dna-features-viewer	109	log plain
d---------	py-dnaio	109	log plain
d---------	py-ete3	109	log plain
d---------	py-gffutils	109	log plain
d---------	py-goatools	109	log plain
d---------	py-gtfparse	109	log plain
d---------	py-hits	109	log plain
d---------	py-libnuml	178	log plain
d---------	py-libsedml	178	log plain
d---------	py-loompy	109	log plain
d---------	py-macs2	141	log plain
d---------	py-mrcfile	109	log plain
d---------	py-multiqc	141	log plain
d---------	py-ont-fast5-api	141	log plain
d---------	py-orange3-bioinformatics	109	log plain
d---------	py-orange3-single-cell	141	log plain
d---------	py-pandas-charm	109	log plain
d---------	py-py2bit	109	log plain
d---------	py-pybigwig	109	log plain
d---------	py-pyfaidx	109	log plain
d---------	py-pyrodigal	109	log plain
d---------	py-pysam	141	log plain
d---------	py-python-libsbml	146	log plain
d---------	py-pywgsim	109	log plain
d---------	py-resdk	109	log plain
d---------	py-scikit-bio	109	log plain
d---------	py-valerius	109	log plain
d---------	py-xenaPython	109	log plain
d---------	pyfasta	109	log plain
d---------	python-nexus	141	log plain
d---------	rainbow	141	log plain
d---------	rampler	141	log plain
d---------	readseq	141	log plain
d---------	recombine	141	log plain
d---------	rna-seq	109	log plain
d---------	ruby-bio	146	log plain
d---------	rubygem-bio-executables	109	log plain
d---------	rubygem-bio-old-biofetch-emulator	109	log plain
d---------	rubygem-bio-shell	109	log plain
d---------	rubygem-bio	109	log plain
d---------	sam2pairwise	141	log plain
d---------	samtools	178	log plain
d---------	scrm	141	log plain
d---------	seaview	146	log plain
d---------	seqan-apps	146	log plain
d---------	seqan	146	log plain
d---------	seqan1	146	log plain
d---------	seqan3	146	log plain
d---------	seqio	141	log plain
d---------	seqkit	109	log plain
d---------	seqtk	141	log plain
d---------	sigviewer	109	log plain
d---------	sim4	109	log plain
d---------	slclust	141	log plain
d---------	smithwaterman	178	log plain
d---------	snpeff	178	log plain
d---------	spoa	178	log plain
d---------	sra-tools	178	log plain
d---------	stacks	146	log plain
d---------	star	141	log plain
d---------	stringtie	141	log plain
d---------	subread	178	log plain
d---------	tRNAscan-SE	178	log plain
d---------	tabixpp	141	log plain
d---------	taxonkit	109	log plain
d---------	treekin	141	log plain
d---------	treepuzzle	109	log plain
d---------	trimadap	141	log plain
d---------	trimmomatic	178	log plain
d---------	ucsc-userapps	217	log plain
d---------	ugene	178	log plain
d---------	unikmer	109	log plain
d---------	vcf-split	109	log plain
d---------	vcf2hap	109	log plain
d---------	vcflib	178	log plain
d---------	vcftools	146	log plain
d---------	velvet	141	log plain
d---------	viennarna	178	log plain
d---------	vsearch	109	log plain
d---------	vt	141	log plain
d---------	wise	141	log plain