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* biology/py-newick: Add new portWen Heping2024-02-031-0/+1
* biology/recombine: Remove expired portRene Ladan2024-01-181-1/+0
* biology/seqio: Remove expired portMuhammad Moinur Rahman2024-01-181-1/+0
* biology/sim4: Remove expired portMuhammad Moinur Rahman2024-01-181-1/+0
* biology/py-macs3: Peak caller for TF binding sitesJason W. Bacon2024-01-101-0/+1
* biology/R-cran-Biobase: New portMuhammad Moinur Rahman2023-12-151-0/+1
* biology/R-cran-BiocGenerics: New portMuhammad Moinur Rahman2023-12-151-0/+1
* biology/R-cran-BiocManager: New portMuhammad Moinur Rahman2023-12-151-0/+1
* biology/py-htseq: Python library for sequence analysisJason W. Bacon2023-07-281-0/+1
* biology/salmon: Transcript-level quantification of RNA-seqJason W. Bacon2023-07-211-0/+1
* biology/btllib: New port: Bioinformatics Technology Lab common code libraryYuri Victorovich2023-07-211-0/+1
* biology/seqwish: New port: Assembly By Short Sequences: parallel, paired-end ...Yuri Victorovich2023-07-211-0/+1
* biology/locarna: New port: LocARNA provides several tools for the structural ...Yuri Victorovich2023-07-161-0/+1
* biology/mashmap: New port: Fast approximate aligner for long DNA sequencesYuri Victorovich2023-07-111-0/+1
* biology/bifrost: Parallel tool for de Bruijn graphsJason W. Bacon2023-07-071-0/+1
* biology/chip-seq: Metaport for ChIP-Seq analysisJason W. Bacon2023-06-141-0/+1
* biology/bcf-score: Bcftools plugins for GWAS-VCF summary statisticsJason W. Bacon2023-02-251-0/+1
* biology/wfa2-lib: Exact gap-affine algorithm using homologyJason W. Bacon2023-01-301-0/+1
* biology/atac-seq: Metaport for ATAC-Seq analysisJason W. Bacon2023-01-111-0/+1
* biology/py-biosig: New port: Library for reading and writing different biosig...Yuri Victorovich2022-12-301-0/+1
* biology/rna-seq: Metaport for RNA-Seq analysisJason W. Bacon2022-12-121-0/+1
* biology/fasda: Fast and simple differential analysisJason W. Bacon2022-12-121-0/+1
* biology/py-pyrodigal: New port: Python binding for Prodigal, an ORF finder fo...Yuri Victorovich2022-12-061-0/+1
* biology/metaeuk: New port: Gene discovery and annotation for large-scale euka...Yuri Victorovich2022-11-261-0/+1
* biology/augustus: New port: Genome annotation toolYuri Victorovich2022-11-251-0/+1
* biology/barrnap: New port: BAsic Rapid Ribosomal RNA PredictorYuri Victorovich2022-11-251-0/+1
* biology/megahit: Ultra-fast single-node metagenomics assemblyJason W. Bacon2022-11-221-0/+1
* biology/libcombine: New port: C++ library for working with the COMBINE archiv...Yuri Victorovich2022-10-211-0/+1
* biology/py-valerius: New port: Python bioinformatics toolsYuri Victorovich2022-10-041-0/+1
* biology/kmcp: New port: Accurate metagenomic profiling & fast large-scale ge...Yuri Victorovich2022-08-071-0/+1
* biology/ngs-sdk: Revert: Un-remove, ngs was moved into sra-toolsYuri Victorovich2022-07-071-0/+1
* biology/ngs-sdk: Remove, ngs was moved into sra-toolsYuri Victorovich2022-07-061-1/+0
* biology/mopac: Move to science/mopac; Add TIMESTAMP to distinfo; Take maintai...Yuri Victorovich2022-06-191-1/+0
* biology/py-mrcfile: New port: MRC file I/O library which is used in structura...Yuri Victorovich2022-05-011-0/+1
* biology/fastq-trim: Lightening fast sequence read trimmerJason W. Bacon2022-03-191-0/+1
* biology/py-bcbio-gff: Read and write Generic Feature Format (GFF)Jason W. Bacon2022-02-031-0/+2
* biology/libgff: GFF/GTF parsing library based on GCLibJason W. Bacon2021-12-051-0/+1
* biology/bio-mocha: bcftools plugin for mosaic chromosomal alterationsJason W. Bacon2021-12-031-0/+1
* biology/gffread: GFF/GTF format conversions, filtering, FASTA extraction, etcJason W. Bacon2021-11-101-0/+1
* */Makefile: Sort SUBDIRsPo-Chuan Hsieh2021-10-251-1/+1
* biology/py-deeptools: User-friendly tools for exploring deep-sequencing dataJason W. Bacon2021-10-141-0/+1
* biology/py-bigwig: Rename to biology/py-pybigwigJason W. Bacon2021-10-131-1/+1
* biology/py-pybigwig: remove, duplicate of biology/py-bigwigAntoine Brodin2021-10-131-1/+0
* biology/py-pybigwig: Fix poudriere buildJason W. Bacon2021-10-131-0/+1
* biology/py-pybigwig: Python access to bigWig files using libBigWigJason W. Bacon2021-10-131-0/+1
* biology/py-py2bit: Python interface for 2bit packed nucleotide filesJason W. Bacon2021-10-131-0/+1
* biology/bamutil: Utilities for working with SAM/BAM filesJason W. Bacon2021-10-121-0/+1
* biology/libneurosim: New port: Common interfaces for neuronal simulatorsYuri Victorovich2021-10-081-0/+1
* */Makefile: Sort SUBDIRsPo-Chuan Hsieh2021-09-211-2/+2
* biology/py-libsedml: New port: SED-ML library for PythonYuri Victorovich2021-09-191-0/+1
generated by cgit v1.2.3 (git 2.25.1) at 2024-06-11 22:05:13 +0000