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PORTNAME= PyNE
DISTVERSION= 0.7.8
CATEGORIES= science # physics
MASTER_SITES= https://raw.githubusercontent.com/pyne/data/master/:decay \
https://raw.githubusercontent.com/pyne/data/master/:cram \
https://raw.githubusercontent.com/pyne/data/master/:dlc \
https://raw.githubusercontent.com/pyne/data/master/:clc \
https://raw.githubusercontent.com/pyne/data/master/:nuc_data
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
DISTFILES= decay.tar.gz:decay \
cram.tar.gz:cram \
decay-linux-clang.tar.gz:dlc \
cram-linux-clang.tar.gz:clc \
prebuilt_nuc_data.h5:nuc_data
DIST_SUBDIR= ${PORTNAME}-${PORTVERSION}
EXTRACT_ONLY= ${DISTNAME}.tar.gz
MAINTAINER= yuri@FreeBSD.org
COMMENT= PyNE: The Nuclear Engineering Toolkit
WWW= https://pyne.io/
LICENSE= BSD2CLAUSE
LICENSE_FILE= ${WRKSRC}/license.txt
BROKEN_armv7= clang runs out of memory
PY_DEPENDS= ${PYTHON_PKGNAMEPREFIX}future>0:devel/py-future@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}matplotlib>0:math/py-matplotlib@${PY_FLAVOR} \
${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}progress>0:devel/py-progress@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}tables>0:devel/py-tables@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}tables>0:devel/py-tables@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR} # the dependency list is only in ubuntu.sh, see https://github.com/pyne/pyne/issues/1518
PY_DEPENDS+= ${PYTHON_PKGNAMEPREFIX}OpenMC>0:science/py-OpenMC@${PY_FLAVOR}
BUILD_DEPENDS= cmake:devel/cmake-core \
${PY_DEPENDS}
LIB_DEPENDS= libhdf5.so:science/hdf5 \
libMOAB.so:math/moab
RUN_DEPENDS= ${PY_DEPENDS}
USES= compiler:c++17-lang fortran python
USE_PYTHON= distutils cython flavors
USE_GITHUB= yes
GH_ACCOUNT= pyne
GH_PROJECT= pyne
MAKE_ENV= DESTDIR=${STAGEDIR}
TEST_ENV= ${MAKE_ENV} PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}
FFLAGS+= -fallow-argument-mismatch
# all arguments are described here: http://pyne.io/install/source.html#source
PY_EXTRA_ARGS= --slow # this chooses slow compilation of sources from {decay,cram}.tar.gz
# over incompatible pre-compiled assembly from {decay,cram}-linux-clang.tar.gz
PY_EXTRA_ARGS+= ${_MAKE_JOBS}
PY_EXTRA_ARGS+= --hdf5 ${LOCALBASE}
PY_EXTRA_ARGS+= --moab ${LOCALBASE}
PYDISTUTILS_CONFIGUREARGS= ${PY_EXTRA_ARGS}
PYDISTUTILS_BUILDARGS= ${PY_EXTRA_ARGS}
BINARY_ALIAS= python=${PYTHON_CMD}
post-extract:
.for f in decay.tar.gz cram.tar.gz decay-linux-clang.tar.gz cram-linux-clang.tar.gz
@${CP} ${DISTDIR}/${DIST_SUBDIR}/${f} ${WRKSRC}/src
.endfor
do-install:
# install project
cd ${INSTALL_WRKSRC} && \
${SETENV} ${MAKE_ENV} ${PYTHON_CMD} ${PYDISTUTILS_SETUP} ${PYDISTUTILS_INSTALL_TARGET}
# also install nuc_data.h5 because it is referred to in the code and is required by Jupyter notebooks
${INSTALL_DATA} ${DISTDIR}/${DIST_SUBDIR}/prebuilt_nuc_data.h5 ${STAGEDIR}${PYTHON_SITELIBDIR}/pyne/nuc_data.h5
# remove stray files
${RM} ${STAGEDIR}${PREFIX}/bin/ubuntu.sh
# strip
${STRIP_CMD} \
${STAGEDIR}${LOCALBASE}/lib/lib*.so \
${STAGEDIR}${PYTHON_SITELIBDIR}/pyne/*.so \
${STAGEDIR}${PYTHON_SITELIBDIR}/pyne/xs/models.so
.include <bsd.port.mk>
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