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PORTNAME= ad2vcf
DISTVERSION= 0.1.6-19
DISTVERSIONSUFFIX= -gf42ae91
CATEGORIES= biology
MAINTAINER= jwb@FreeBSD.org
COMMENT= Add allelic depth info from a SAM stream to a VCF file
WWW= https://github.com/auerlab/ad2vcf
LICENSE= BSD2CLAUSE
LICENSE_FILE= ${WRKSRC}/LICENSE
LIB_DEPENDS= libbiolibc.so:biology/biolibc libxtend.so:devel/libxtend
USE_GITHUB= yes
GH_ACCOUNT= auerlab
MAKE_ARGS= MANPREFIX=${PREFIX}/share
MAKE_ENV+= VERSION=${PORTVERSION}
PLIST_FILES= bin/ad2vcf share/man/man1/ad2vcf.1.gz
pre-build:
(cd ${WRKSRC} && ${MAKE} LOCALBASE=${LOCALBASE} depend)
do-test:
(cd ${WRKSRC}/Test && ./run-test.sh)
.include <bsd.port.mk>
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