diff options
author | Martin Wilke <miwi@FreeBSD.org> | 2014-03-13 07:41:34 +0000 |
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committer | Martin Wilke <miwi@FreeBSD.org> | 2014-03-13 07:41:34 +0000 |
commit | 059bf913b9f4c970ea84c4f08678edc1089a65b9 (patch) | |
tree | 6f1e78cbb9e2478d92b50fcc3708e3f345578fa9 | |
parent | 1d467014a2cd3fe1e51513b37659b3373d4609e7 (diff) | |
download | ports-059bf913b9f4c970ea84c4f08678edc1089a65b9.tar.gz ports-059bf913b9f4c970ea84c4f08678edc1089a65b9.zip |
Notes
-rw-r--r-- | biology/garlic/Makefile | 2 | ||||
-rw-r--r-- | biology/mafft/Makefile | 2 | ||||
-rw-r--r-- | biology/mopac/Makefile | 2 | ||||
-rw-r--r-- | biology/mummer/Makefile | 2 | ||||
-rw-r--r-- | biology/muscle/Makefile | 2 | ||||
-rw-r--r-- | biology/paml/Makefile | 2 | ||||
-rw-r--r-- | biology/phylip/Makefile | 2 | ||||
-rw-r--r-- | biology/pymol/Makefile | 2 | ||||
-rw-r--r-- | biology/velvet/Makefile | 3 | ||||
-rw-r--r-- | biology/xmolwt/Makefile | 2 |
10 files changed, 10 insertions, 11 deletions
diff --git a/biology/garlic/Makefile b/biology/garlic/Makefile index e6260cf07ed6..c59284dcd0fd 100644 --- a/biology/garlic/Makefile +++ b/biology/garlic/Makefile @@ -14,7 +14,7 @@ EXTRACT_ONLY= ${DISTNAME}${EXTRACT_SUFX} MAINTAINER= maho@FreeBSD.org COMMENT= Molecular viewer, editor, and visualization program -USE_GMAKE= yes +USES= gmake USE_XORG= x11 ALL_TARGET= # empty diff --git a/biology/mafft/Makefile b/biology/mafft/Makefile index 8ef06d99f0d4..87b2e322c596 100644 --- a/biology/mafft/Makefile +++ b/biology/mafft/Makefile @@ -18,7 +18,7 @@ RUN_DEPENDS= lav2ps:${PORTSDIR}/biology/fasta3 WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION}-without-extensions BUILD_WRKSRC= ${WRKSRC}/core -USE_GMAKE= yes +USES= gmake MAN1= mafft.1 mafft-homologs.1 diff --git a/biology/mopac/Makefile b/biology/mopac/Makefile index ad1ab10dfcff..a3c0cc10adfc 100644 --- a/biology/mopac/Makefile +++ b/biology/mopac/Makefile @@ -14,7 +14,7 @@ COMMENT= Semi-empirical (MNDO, etc.) molecular orbital calculation LIB_DEPENDS= libf2c.so:${PORTSDIR}/lang/f2c -USE_GMAKE= yes +USES= gmake USE_AUTOTOOLS= aclocal automake autoconf libtool ACLOCAL_ARGS= -I ${LOCALBASE}/share/aclocal AUTOMAKE_ARGS= --add-missing --copy diff --git a/biology/mummer/Makefile b/biology/mummer/Makefile index 0685d21681bd..4ef47331192e 100644 --- a/biology/mummer/Makefile +++ b/biology/mummer/Makefile @@ -10,7 +10,7 @@ DISTNAME= MUMmer${PORTVERSION} MAINTAINER= sylvio@FreeBSD.org COMMENT= A modular system for rapid whole genome alignment -USE_GMAKE= yes +USES= gmake PROGRAMS= annotate combineMUMs delta-filter gaps \ mgaps mummer repeat-match show-aligns \ diff --git a/biology/muscle/Makefile b/biology/muscle/Makefile index eb39f1a540bb..224eada0040e 100644 --- a/biology/muscle/Makefile +++ b/biology/muscle/Makefile @@ -22,7 +22,7 @@ COMMENT= Multiple Sequence Comparison by Log-Expectation FETCH_ARGS= -A -USE_GMAKE= yes +USES= gmake USE_DOS2UNIX= *.cpp PLIST_FILES= bin/muscle diff --git a/biology/paml/Makefile b/biology/paml/Makefile index ceb3bde4eaf4..74d9c54e1df5 100644 --- a/biology/paml/Makefile +++ b/biology/paml/Makefile @@ -10,7 +10,7 @@ DISTNAME= ${PORTNAME}${PORTVERSION} MAINTAINER= wen@FreeBSD.org COMMENT= Phylogenetic Analysis by Maximum Likelihood (PAML) -USE_GMAKE= YES +USES= gmake WRKSRC= ${WRKDIR}/${PORTNAME}44/src MAKE_ARGS= CC="${CC}" CFLAGS="${CFLAGS}" diff --git a/biology/phylip/Makefile b/biology/phylip/Makefile index 93af0d8eaa54..dcae4f991c4e 100644 --- a/biology/phylip/Makefile +++ b/biology/phylip/Makefile @@ -19,7 +19,7 @@ BUILD_WRKSRC= ${WRKSRC}/src INSTALL_WRKSRC= ${WRKSRC}/src USE_XORG= x11 xaw xt -USE_GMAKE= yes +USES= gmake MAKEFILE= Makefile.unx MAKE_ARGS= CC="${CC}" CFLAGS="${CFLAGS} -DUNX" \ DFLAGS="${CFLAGS} -DX -I${LOCALBASE}/include" \ diff --git a/biology/pymol/Makefile b/biology/pymol/Makefile index 905999115534..c8bc6132bc69 100644 --- a/biology/pymol/Makefile +++ b/biology/pymol/Makefile @@ -22,7 +22,7 @@ SVNREVISION= 3978 USE_BZIP2= yes WRKSRC= ${WRKDIR}/pymol-${PORTVERSION} USE_GL= glut glew -USE_GMAKE= yes +USES= gmake USE_PYTHON= yes PLIST_SUB= PYMOL_VER=${VERSION} PYTHON_VER=${PYTHON_VER} diff --git a/biology/velvet/Makefile b/biology/velvet/Makefile index cd80954703fb..06f7344df390 100644 --- a/biology/velvet/Makefile +++ b/biology/velvet/Makefile @@ -11,14 +11,13 @@ EXTRACT_SUFX= .tgz MAINTAINER= mzaki@m.u-tokyo.ac.jp COMMENT= Sequence assembler for very short reads -USE_GMAKE= yes ALL_TARGET= default MAXKMERLENGTH?= 31 VELVET_CATEGORIES?= 2 MAKE_ENV+= MAXKMERLENGTH=${MAXKMERLENGTH} CATEGORIES=${VELVET_CATEGORIES} -USES= perl5 +USES= perl5 gmake USE_PERL5= run BINARIES= velvetg velveth diff --git a/biology/xmolwt/Makefile b/biology/xmolwt/Makefile index 45c2a6e599eb..9c206c4bb3ec 100644 --- a/biology/xmolwt/Makefile +++ b/biology/xmolwt/Makefile @@ -12,7 +12,7 @@ COMMENT= Calculate atom weight and percent of each element for a given formula OPTIONS_DEFINE= DOCS GTK2 -USE_GMAKE= yes +USES= gmake MAKEFILE= Makefile.gtk ALL_TARGET= gmolwt |