diff options
author | Sunpoet Po-Chuan Hsieh <sunpoet@FreeBSD.org> | 2019-04-22 20:42:08 +0000 |
---|---|---|
committer | Sunpoet Po-Chuan Hsieh <sunpoet@FreeBSD.org> | 2019-04-22 20:42:08 +0000 |
commit | 71717e8e5cd9c0cf42150d7a57869f1c90027ee9 (patch) | |
tree | 4868ee822ce3d9eecdaae46229db1784723461f5 | |
parent | b9043fbaafdfbb80700235987f37e00f211a253d (diff) |
Notes
-rw-r--r-- | biology/p5-Bio-MAGETAB/Makefile | 2 | ||||
-rw-r--r-- | biology/p5-Bio-MAGETAB/pkg-plist | 44 |
2 files changed, 23 insertions, 23 deletions
diff --git a/biology/p5-Bio-MAGETAB/Makefile b/biology/p5-Bio-MAGETAB/Makefile index ada1684d0473..e2941d7ca36b 100644 --- a/biology/p5-Bio-MAGETAB/Makefile +++ b/biology/p5-Bio-MAGETAB/Makefile @@ -14,7 +14,7 @@ COMMENT= Data model and utility API for the MAGE-TAB format LICENSE= GPLv2 BUILD_DEPENDS= ${RUN_DEPENDS} -RUN_DEPENDS= p5-Date-Manip>=5.44:devel/p5-Date-Manip \ +xRUN_DEPENDS= p5-Date-Manip>=5.44:devel/p5-Date-Manip \ p5-DateTime>=0.43.02:devel/p5-DateTime \ p5-DateTime-Format-DateManip>=0.04:devel/p5-DateTime-Format-DateManip \ p5-Email-Valid>=0.179:mail/p5-Email-Valid \ diff --git a/biology/p5-Bio-MAGETAB/pkg-plist b/biology/p5-Bio-MAGETAB/pkg-plist index 2e4eb84bec37..f9e53317daa8 100644 --- a/biology/p5-Bio-MAGETAB/pkg-plist +++ b/biology/p5-Bio-MAGETAB/pkg-plist @@ -2,23 +2,7 @@ bin/deploy_magetab_db.pl bin/fix_ae_magetab.pl bin/read_magetab.pl bin/unload_magetab_namespace.pl -%%SITE_PERL%%/Bio/MAGETAB/Util/Reader/DataMatrix.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Reader/TagValueFile.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Reader/Tabfile.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Reader/ADF.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Reader/IDF.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Reader/SDRF.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Writer/ADF.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Writer/GraphViz.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Writer/IDF.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Writer/SDRF.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Writer/Tabfile.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Writer.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Reader.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Builder.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/DBLoader.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/RewriteAE.pm -%%SITE_PERL%%/Bio/MAGETAB/Util/Persistence.pm +%%SITE_PERL%%/Bio/MAGETAB.pm %%SITE_PERL%%/Bio/MAGETAB/ArrayDesign.pm %%SITE_PERL%%/Bio/MAGETAB/Assay.pm %%SITE_PERL%%/Bio/MAGETAB/BaseClass.pm @@ -26,17 +10,17 @@ bin/unload_magetab_namespace.pl %%SITE_PERL%%/Bio/MAGETAB/CompositeElement.pm %%SITE_PERL%%/Bio/MAGETAB/Contact.pm %%SITE_PERL%%/Bio/MAGETAB/ControlledTerm.pm +%%SITE_PERL%%/Bio/MAGETAB/Data.pm %%SITE_PERL%%/Bio/MAGETAB/DataAcquisition.pm %%SITE_PERL%%/Bio/MAGETAB/DataFile.pm %%SITE_PERL%%/Bio/MAGETAB/DataMatrix.pm %%SITE_PERL%%/Bio/MAGETAB/DatabaseEntry.pm -%%SITE_PERL%%/Bio/MAGETAB/Data.pm %%SITE_PERL%%/Bio/MAGETAB/DesignElement.pm %%SITE_PERL%%/Bio/MAGETAB/Edge.pm %%SITE_PERL%%/Bio/MAGETAB/Event.pm %%SITE_PERL%%/Bio/MAGETAB/Extract.pm -%%SITE_PERL%%/Bio/MAGETAB/FactorValue.pm %%SITE_PERL%%/Bio/MAGETAB/Factor.pm +%%SITE_PERL%%/Bio/MAGETAB/FactorValue.pm %%SITE_PERL%%/Bio/MAGETAB/Feature.pm %%SITE_PERL%%/Bio/MAGETAB/Investigation.pm %%SITE_PERL%%/Bio/MAGETAB/LabeledExtract.pm @@ -47,18 +31,34 @@ bin/unload_magetab_namespace.pl %%SITE_PERL%%/Bio/MAGETAB/Node.pm %%SITE_PERL%%/Bio/MAGETAB/Normalization.pm %%SITE_PERL%%/Bio/MAGETAB/ParameterValue.pm +%%SITE_PERL%%/Bio/MAGETAB/Protocol.pm %%SITE_PERL%%/Bio/MAGETAB/ProtocolApplication.pm %%SITE_PERL%%/Bio/MAGETAB/ProtocolParameter.pm -%%SITE_PERL%%/Bio/MAGETAB/Protocol.pm %%SITE_PERL%%/Bio/MAGETAB/Publication.pm %%SITE_PERL%%/Bio/MAGETAB/Reporter.pm -%%SITE_PERL%%/Bio/MAGETAB/SDRFRow.pm %%SITE_PERL%%/Bio/MAGETAB/SDRF.pm +%%SITE_PERL%%/Bio/MAGETAB/SDRFRow.pm %%SITE_PERL%%/Bio/MAGETAB/Sample.pm %%SITE_PERL%%/Bio/MAGETAB/Source.pm %%SITE_PERL%%/Bio/MAGETAB/TermSource.pm %%SITE_PERL%%/Bio/MAGETAB/Types.pm -%%SITE_PERL%%/Bio/MAGETAB.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Builder.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/DBLoader.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Persistence.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Reader.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Reader/ADF.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Reader/DataMatrix.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Reader/IDF.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Reader/SDRF.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Reader/Tabfile.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Reader/TagValueFile.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/RewriteAE.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Writer.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Writer/ADF.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Writer/GraphViz.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Writer/IDF.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Writer/SDRF.pm +%%SITE_PERL%%/Bio/MAGETAB/Util/Writer/Tabfile.pm %%PERL5_MAN3%%/Bio::MAGETAB.3.gz %%PERL5_MAN3%%/Bio::MAGETAB::ArrayDesign.3.gz %%PERL5_MAN3%%/Bio::MAGETAB::Assay.3.gz |