diff options
| author | Steve Wills <swills@FreeBSD.org> | 2019-06-08 01:31:18 +0000 |
|---|---|---|
| committer | Steve Wills <swills@FreeBSD.org> | 2019-06-08 01:31:18 +0000 |
| commit | f0b00e7fb7bf13c20d742e5f7a40ccb846026ea0 (patch) | |
| tree | 288558153360a679cddee8bc89b3dc4a799a918d | |
| parent | bbba940adfb68ec89d20961039d152bfaee31821 (diff) | |
Notes
| -rw-r--r-- | biology/tRNAscan-SE/Makefile | 7 | ||||
| -rw-r--r-- | biology/tRNAscan-SE/distinfo | 6 | ||||
| -rw-r--r-- | biology/tRNAscan-SE/files/patch-tRNAscan-SE.src | 10 |
3 files changed, 8 insertions, 15 deletions
diff --git a/biology/tRNAscan-SE/Makefile b/biology/tRNAscan-SE/Makefile index a4155745402e..09d63d0e8e7f 100644 --- a/biology/tRNAscan-SE/Makefile +++ b/biology/tRNAscan-SE/Makefile @@ -2,10 +2,9 @@ # $FreeBSD$ PORTNAME= tRNAscan-SE -PORTVERSION= 2.0.0 -PORTREVISION= 1 +PORTVERSION= 2.0.3 CATEGORIES= biology -MASTER_SITES= http://lowelab.ucsc.edu/software/ +MASTER_SITES= http://trna.ucsc.edu/software/ DISTFILES= ${DISTNAME:tl}${EXTRACT_SUFX} MAINTAINER= mzaki@niid.go.jp @@ -16,7 +15,7 @@ LICENSE_FILE= ${WRKSRC}/COPYING RUN_DEPENDS= cmsearch:biology/infernal -WRKSRC= ${WRKDIR}/${DISTNAME:S,.0$,,} +WRKSRC= ${WRKDIR}/${DISTNAME:C,\.[0-9]+$,,} GNU_CONFIGURE= yes diff --git a/biology/tRNAscan-SE/distinfo b/biology/tRNAscan-SE/distinfo index fce995d4414e..2608d37c82f6 100644 --- a/biology/tRNAscan-SE/distinfo +++ b/biology/tRNAscan-SE/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1528270436 -SHA256 (trnascan-se-2.0.0.tar.gz) = 0dde1c07142e4bf77b21d53ddf3eeb1ef8c52248005a42323d13f8d7c798100c -SIZE (trnascan-se-2.0.0.tar.gz) = 4372755 +TIMESTAMP = 1557725777 +SHA256 (trnascan-se-2.0.3.tar.gz) = b305c1bf226d16833349b22ad1f3160a52ad30f577a336128da3cc76d5772a4e +SIZE (trnascan-se-2.0.3.tar.gz) = 4372985 diff --git a/biology/tRNAscan-SE/files/patch-tRNAscan-SE.src b/biology/tRNAscan-SE/files/patch-tRNAscan-SE.src index 8bb7d492e25f..1ccb6ae31d0f 100644 --- a/biology/tRNAscan-SE/files/patch-tRNAscan-SE.src +++ b/biology/tRNAscan-SE/files/patch-tRNAscan-SE.src @@ -1,12 +1,6 @@ ---- tRNAscan-SE.src.orig 2017-12-03 01:59:25 UTC +--- tRNAscan-SE.src.orig 2019-04-30 21:37:37 UTC +++ tRNAscan-SE.src -@@ -1,4 +1,4 @@ --#! /usr/bin/perl -+#! @PERL@ - # - # -------------------------------------------------------------------- - # tRNAscan-SE: a program for improved detection of transfer RNA -@@ -44,7 +44,7 @@ our $release_date = "December 2017"; +@@ -44,7 +44,7 @@ our $release_date = "April 2019"; our $program_id = "tRNAscan-SE-".$version; # modified by 'make' |