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| author | Jason W. Bacon <jwb@FreeBSD.org> | 2021-08-22 13:59:58 +0000 |
|---|---|---|
| committer | Jason W. Bacon <jwb@FreeBSD.org> | 2021-08-22 13:59:58 +0000 |
| commit | c5efaea23b875a30e9a7652734d2c992d44f9fbc (patch) | |
| tree | 3643ad563b3cef0bd98483069992fe5cd7b2efcd /biology/bbmap/pkg-plist | |
| parent | 213eef02963155bd76873f679f6e29c7a0abf6ee (diff) | |
| download | ports-c5efaea23b875a30e9a7652734d2c992d44f9fbc.tar.gz ports-c5efaea23b875a30e9a7652734d2c992d44f9fbc.zip | |
Diffstat (limited to 'biology/bbmap/pkg-plist')
| -rw-r--r-- | biology/bbmap/pkg-plist | 16 |
1 files changed, 14 insertions, 2 deletions
diff --git a/biology/bbmap/pkg-plist b/biology/bbmap/pkg-plist index 195fa6f86ab3..d4d5cbf8b549 100644 --- a/biology/bbmap/pkg-plist +++ b/biology/bbmap/pkg-plist @@ -1,9 +1,11 @@ bin/bbduk.sh bin/bbmap.sh +bin/bbmerge.sh bin/bbnorm.sh bin/bloomfilter.sh bin/dedupe.sh bin/reformat.sh +bin/tadpole.sh libexec/bbmap/a_sample_mt.sh libexec/bbmap/addadapters.sh libexec/bbmap/addssu.sh @@ -1184,6 +1186,8 @@ libexec/bbmap/webcheck.sh %%JAVAJARDIR%%/bbmap/jgi/Seal$ProcessThread.class %%JAVAJARDIR%%/bbmap/jgi/Seal.class %%JAVAJARDIR%%/bbmap/jgi/Seal.java +%%JAVAJARDIR%%/bbmap/jgi/SealRefInfo.class +%%JAVAJARDIR%%/bbmap/jgi/SealRefInfo.java %%JAVAJARDIR%%/bbmap/jgi/Shred.class %%JAVAJARDIR%%/bbmap/jgi/Shred.java %%JAVAJARDIR%%/bbmap/jgi/SmallKmerFrequency$CountComparator.class @@ -1233,8 +1237,6 @@ libexec/bbmap/webcheck.sh %%JAVAJARDIR%%/bbmap/kmer/AbstractKmerTable.java %%JAVAJARDIR%%/bbmap/kmer/AbstractKmerTableSet.class %%JAVAJARDIR%%/bbmap/kmer/AbstractKmerTableSet.java -%%JAVAJARDIR%%/bbmap/kmer/AtomicShortArray.class -%%JAVAJARDIR%%/bbmap/kmer/AtomicShortArray.java %%JAVAJARDIR%%/bbmap/kmer/DumpThread.class %%JAVAJARDIR%%/bbmap/kmer/DumpThread.java %%JAVAJARDIR%%/bbmap/kmer/HashArray.class @@ -1553,6 +1555,12 @@ libexec/bbmap/webcheck.sh %%JAVAJARDIR%%/bbmap/sort/SortReadsByID$Block.class %%JAVAJARDIR%%/bbmap/sort/SortReadsByID.class %%JAVAJARDIR%%/bbmap/sort/SortReadsByID.java +%%JAVAJARDIR%%/bbmap/star/Ship.class +%%JAVAJARDIR%%/bbmap/star/Ship.java +%%JAVAJARDIR%%/bbmap/star/Simulate.class +%%JAVAJARDIR%%/bbmap/star/Simulate.java +%%JAVAJARDIR%%/bbmap/star/Weapon.class +%%JAVAJARDIR%%/bbmap/star/Weapon.java %%JAVAJARDIR%%/bbmap/stream/ArrayListSet$Pack.class %%JAVAJARDIR%%/bbmap/stream/ArrayListSet.class %%JAVAJARDIR%%/bbmap/stream/ArrayListSet.java @@ -1726,6 +1734,10 @@ libexec/bbmap/webcheck.sh %%JAVAJARDIR%%/bbmap/structures/LongHeapSetInterface.java %%JAVAJARDIR%%/bbmap/structures/LongList.class %%JAVAJARDIR%%/bbmap/structures/LongList.java +%%JAVAJARDIR%%/bbmap/structures/LongList2.class +%%JAVAJARDIR%%/bbmap/structures/LongList2.java +%%JAVAJARDIR%%/bbmap/structures/LongList3.class +%%JAVAJARDIR%%/bbmap/structures/LongList3.java %%JAVAJARDIR%%/bbmap/structures/LongListSet$LongListSetIterator.class %%JAVAJARDIR%%/bbmap/structures/LongListSet.class %%JAVAJARDIR%%/bbmap/structures/LongListSet.java |