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authorJason W. Bacon <jwb@FreeBSD.org>2023-10-18 12:26:11 +0000
committerJason W. Bacon <jwb@FreeBSD.org>2023-10-18 12:26:11 +0000
commitfee1d76936f6a36a27b271d0dbe7685b4fd84cc0 (patch)
tree444f02bfcaf5a8a6e0d1e4e318bcf0c1c7d9d49c /biology/bowtie2
parent3d9f300e01f5ecdb140027096c603623264ecc07 (diff)
downloadports-fee1d76936f6a36a27b271d0dbe7685b4fd84cc0.tar.gz
ports-fee1d76936f6a36a27b271d0dbe7685b4fd84cc0.zip
biology/bowtie2: Update to 2.5.2
A few bug fixes Changes: https://github.com/BenLangmead/bowtie2/releases Reported by: portscout
Diffstat (limited to 'biology/bowtie2')
-rw-r--r--biology/bowtie2/Makefile5
-rw-r--r--biology/bowtie2/distinfo6
2 files changed, 6 insertions, 5 deletions
diff --git a/biology/bowtie2/Makefile b/biology/bowtie2/Makefile
index 14777fb43760..88d57745908b 100644
--- a/biology/bowtie2/Makefile
+++ b/biology/bowtie2/Makefile
@@ -1,6 +1,6 @@
PORTNAME= bowtie2
DISTVERSIONPREFIX= v
-DISTVERSION= 2.5.1
+DISTVERSION= 2.5.2
CATEGORIES= biology perl5 python
MAINTAINER= jwb@FreeBSD.org
@@ -10,8 +10,9 @@ WWW= https://github.com/BenLangmead/bowtie2
LICENSE= GPLv3+
LICENSE_FILE= ${WRKSRC}/LICENSE
-# Requires a 64-bit processor and depends on hard-coded asm instructions
ONLY_FOR_ARCHS= aarch64 amd64 powerpc64 powerpc64le
+ONLY_FOR_ARCHS_REASON= Requires a 64-bit processor
+
RUN_DEPENDS= bash:shells/bash
USES= gmake localbase:ldflags perl5 python shebangfix
diff --git a/biology/bowtie2/distinfo b/biology/bowtie2/distinfo
index 69c8b6900f9a..fd7a62f2ce84 100644
--- a/biology/bowtie2/distinfo
+++ b/biology/bowtie2/distinfo
@@ -1,5 +1,5 @@
-TIMESTAMP = 1674338476
-SHA256 (BenLangmead-bowtie2-v2.5.1_GH0.tar.gz) = 3fe00f4f89b5dd85fd9317e2168ec93f30dbb75d7950a08516c767d21eca7c27
-SIZE (BenLangmead-bowtie2-v2.5.1_GH0.tar.gz) = 10598627
+TIMESTAMP = 1697555094
+SHA256 (BenLangmead-bowtie2-v2.5.2_GH0.tar.gz) = 2f86dbfbf3dcb8521d559f830594fe28ac6e4c40d81313a8c2bfb17c82a501e0
+SIZE (BenLangmead-bowtie2-v2.5.2_GH0.tar.gz) = 10632647
SHA256 (simd-everywhere-simde-no-tests-f6a0b3b_GH0.tar.gz) = 9874f22afe8a6cd92770aa194df47db3d0963d80ea233a502b0d557f59763eb8
SIZE (simd-everywhere-simde-no-tests-f6a0b3b_GH0.tar.gz) = 397743