aboutsummaryrefslogtreecommitdiff
path: root/biology/bowtie
diff options
context:
space:
mode:
authorMartin Wilke <miwi@FreeBSD.org>2017-04-22 09:25:44 +0000
committerMartin Wilke <miwi@FreeBSD.org>2017-04-22 09:25:44 +0000
commit5cf0569ebb87d322dd46158bb70774c5327a70f7 (patch)
treee91c9a8c6f2b89cd24bbaaf5787f222813e4a7b5 /biology/bowtie
parent23a875c3c3374159f07c876061cbdd066eb16633 (diff)
downloadports-5cf0569ebb87d322dd46158bb70774c5327a70f7.tar.gz
ports-5cf0569ebb87d322dd46158bb70774c5327a70f7.zip
Notes
Diffstat (limited to 'biology/bowtie')
-rw-r--r--biology/bowtie/Makefile7
1 files changed, 4 insertions, 3 deletions
diff --git a/biology/bowtie/Makefile b/biology/bowtie/Makefile
index 991393a072d1..8d419e80cf16 100644
--- a/biology/bowtie/Makefile
+++ b/biology/bowtie/Makefile
@@ -3,7 +3,7 @@
PORTNAME= bowtie
PORTVERSION= 1.1.2
-PORTREVISION= 2
+PORTREVISION= 3
DISTVERSIONPREFIX= v
CATEGORIES= biology
@@ -17,9 +17,10 @@ ONLY_FOR_ARCHS= amd64
# FIXME: bowtie-align intermittently dumps core when compiled with clang
# GCC 4.2 does not provide good performance
USE_GCC= yes
-USES= gmake perl5 shebangfix
+USES= gmake perl5 python:run shebangfix
USE_PERL5= run
-SHEBANG_FILES= scripts/*.pl
+SHEBANG_FILES= scripts/*.pl bowtie bowtie-build \
+ bowtie-inspect
USE_GITHUB= yes
GH_ACCOUNT= BenLangmead