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| author | Yuri Victorovich <yuri@FreeBSD.org> | 2018-12-04 17:53:46 +0000 |
|---|---|---|
| committer | Yuri Victorovich <yuri@FreeBSD.org> | 2018-12-04 17:53:46 +0000 |
| commit | 1d5163c9b630d8cae083fd3b09b1eb735100ca1a (patch) | |
| tree | 309fa74e14fa7dc05e344b552e2014ca4b85c2e5 /biology/gatk | |
| parent | e4f8fefbea8731b47c70cca7e0e9b6ac9cb0f2e4 (diff) | |
| download | ports-1d5163c9b630d8cae083fd3b09b1eb735100ca1a.tar.gz ports-1d5163c9b630d8cae083fd3b09b1eb735100ca1a.zip | |
devel/gradle: Update to 5.0
Change biology/igv and biology/gatk to gradle4 due to build failures with gradle5.
PR: 233623
Approved by: gasol.wu@gmail.com (maintainer)
Notes
Notes:
svn path=/head/; revision=486619
Diffstat (limited to 'biology/gatk')
| -rw-r--r-- | biology/gatk/Makefile | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/biology/gatk/Makefile b/biology/gatk/Makefile index 31fa45cc0906..8758c02a874a 100644 --- a/biology/gatk/Makefile +++ b/biology/gatk/Makefile @@ -13,7 +13,7 @@ COMMENT= Variant discovery in high-throughput sequencing data LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.TXT -BUILD_DEPENDS= gradle:devel/gradle +BUILD_DEPENDS= gradle4:devel/gradle4 USES= gettext-runtime USE_GITHUB= yes @@ -34,7 +34,7 @@ post-extract: # to rebuild the deps archive: 1. remove post-extract: 2. remove - @cd ${DEPS_CACHE_DIR} && ${TAR} xzf ${DISTDIR}/${PORTNAME}-${DISTVERSION}-deps${EXTRACT_SUFX} do-build: - @cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle \ + @cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle4 \ --gradle-user-home ${DEPS_CACHE_DIR}/gradle-${PORTNAME} --project-cache-dir ${DEPS_CACHE_DIR}/gradle-${PORTNAME} \ --offline --build-cache localJar |