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| author | Jason W. Bacon <jwb@FreeBSD.org> | 2022-01-19 13:57:36 +0000 |
|---|---|---|
| committer | Jason W. Bacon <jwb@FreeBSD.org> | 2022-01-19 13:57:36 +0000 |
| commit | c9bd01bdf4c1dae17b53482e9dabe000d310cf50 (patch) | |
| tree | 0ae5d8e3ff02b5a9651dbe258d7db49dec778ccc /biology/kallisto/files/patch-src_CMakeLists.txt | |
| parent | f9a2f32279b075d36a16ae85664c4b7ead61410c (diff) | |
| download | ports-c9bd01bdf4c1dae17b53482e9dabe000d310cf50.tar.gz ports-c9bd01bdf4c1dae17b53482e9dabe000d310cf50.zip | |
Diffstat (limited to 'biology/kallisto/files/patch-src_CMakeLists.txt')
| -rw-r--r-- | biology/kallisto/files/patch-src_CMakeLists.txt | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/biology/kallisto/files/patch-src_CMakeLists.txt b/biology/kallisto/files/patch-src_CMakeLists.txt new file mode 100644 index 000000000000..fbeb9128522a --- /dev/null +++ b/biology/kallisto/files/patch-src_CMakeLists.txt @@ -0,0 +1,26 @@ +--- src/CMakeLists.txt.orig 2021-11-24 14:45:50 UTC ++++ src/CMakeLists.txt +@@ -3,15 +3,13 @@ file(GLOB headers *.h *.hpp) + + list(REMOVE_ITEM sources main.cpp) + +-include_directories(../ext/htslib) +- + add_library(kallisto_core ${sources} ${headers}) + target_include_directories(kallisto_core PUBLIC ${CMAKE_CURRENT_SOURCE_DIR}) + + add_executable(kallisto main.cpp) + + find_package( Threads REQUIRED ) +-target_link_libraries(kallisto kallisto_core pthread ${CMAKE_CURRENT_SOURCE_DIR}/../ext/htslib/libhts.a) ++target_link_libraries(kallisto kallisto_core pthread) + + if(LINK MATCHES static) + set(BUILD_SHARED_LIBS OFF) +@@ -56,4 +54,4 @@ else() + endif(LINK MATCHES static) + + +-install(TARGETS kallisto DESTINATION "${CMAKE_INSTALL_BINDIR}") +\ No newline at end of file ++install(TARGETS kallisto DESTINATION "${CMAKE_INSTALL_BINDIR}") |