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| author | Yasuhiro Kimura <yasu@FreeBSD.org> | 2024-03-22 07:25:44 +0000 |
|---|---|---|
| committer | Yasuhiro Kimura <yasu@FreeBSD.org> | 2024-03-22 07:29:47 +0000 |
| commit | eb44cf3c6f2638afa81b13177c442ae96f58f236 (patch) | |
| tree | 2b87fb780ecec467a9fc8c74bceb5fd678e3e488 /biology/minimap2 | |
| parent | 73265dd40101352fc8d0d14b8081f41f7c3bd281 (diff) | |
| download | ports-eb44cf3c6f2638afa81b13177c442ae96f58f236.tar.gz ports-eb44cf3c6f2638afa81b13177c442ae96f58f236.zip | |
Diffstat (limited to 'biology/minimap2')
| -rw-r--r-- | biology/minimap2/Makefile | 1 | ||||
| -rw-r--r-- | biology/minimap2/files/patch-Makefile.simde | 6 | ||||
| -rw-r--r-- | biology/minimap2/pkg-plist | 2 |
3 files changed, 5 insertions, 4 deletions
diff --git a/biology/minimap2/Makefile b/biology/minimap2/Makefile index d403413cc324..df9552ac6ca0 100644 --- a/biology/minimap2/Makefile +++ b/biology/minimap2/Makefile @@ -1,6 +1,7 @@ PORTNAME= minimap2 DISTVERSIONPREFIX= v DISTVERSION= 2.27 +PORTREVISION= 1 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org diff --git a/biology/minimap2/files/patch-Makefile.simde b/biology/minimap2/files/patch-Makefile.simde index 5d5e0ccf482c..aac7981c6b10 100644 --- a/biology/minimap2/files/patch-Makefile.simde +++ b/biology/minimap2/files/patch-Makefile.simde @@ -1,4 +1,4 @@ ---- Makefile.simde.orig 2021-11-18 22:11:48 UTC +--- Makefile.simde.orig 2024-03-12 17:20:07 UTC +++ Makefile.simde @@ -1,13 +1,26 @@ -CFLAGS= -g -Wall -O2 -Wc++-compat #-Wextra @@ -21,7 +21,7 @@ LIBS= -lm -lz -lpthread +PREFIX?= /usr/local -+MAN1DIR?= ${PREFIX}/man/man1 ++MAN1DIR?= ${PREFIX}/share/man/man1 +DATADIR?= ${PREFIX}/share/minimap2 +MKDIR?= mkdir @@ -32,7 +32,7 @@ ifneq ($(arm_neon),) # if arm_neon is defined ifeq ($(aarch64),) #if aarch64 is not defined CFLAGS+=-D_FILE_OFFSET_BITS=64 -mfpu=neon -fsigned-char -@@ -26,7 +39,7 @@ ifneq ($(tsan),) +@@ -26,7 +39,7 @@ endif LIBS+=-fsanitize=thread endif diff --git a/biology/minimap2/pkg-plist b/biology/minimap2/pkg-plist index 1d11d4c99c2f..742d1eb1b3f7 100644 --- a/biology/minimap2/pkg-plist +++ b/biology/minimap2/pkg-plist @@ -1,7 +1,7 @@ bin/minimap2 bin/minimap2-lite bin/sdust -man/man1/minimap2.1.gz +share/man/man1/minimap2.1.gz %%DATADIR%%/test/MT-human.fa %%DATADIR%%/test/MT-orang.fa %%DATADIR%%/test/q-inv.fa |