diff options
| author | Sunpoet Po-Chuan Hsieh <sunpoet@FreeBSD.org> | 2019-08-11 16:49:24 +0000 |
|---|---|---|
| committer | Sunpoet Po-Chuan Hsieh <sunpoet@FreeBSD.org> | 2019-08-11 16:49:24 +0000 |
| commit | b470f47c18a74255920bccb2c0d59ccec0a73608 (patch) | |
| tree | 852bb7a4aa9c8158c12fb61fe9775bb08e43ccd7 /biology/p5-BioPerl | |
| parent | 77902d9fa5892932d54b1561a9a67caa258d43ba (diff) | |
| download | ports-b470f47c18a74255920bccb2c0d59ccec0a73608.tar.gz ports-b470f47c18a74255920bccb2c0d59ccec0a73608.zip | |
Update to 1.007005 (1.7.5)
- Fix DISTNAME
- Bump PORTREVISION for package change
Changes: https://metacpan.org/changes/distribution/BioPerl
Notes
Notes:
svn path=/head/; revision=508637
Diffstat (limited to 'biology/p5-BioPerl')
| -rw-r--r-- | biology/p5-BioPerl/Makefile | 3 | ||||
| -rw-r--r-- | biology/p5-BioPerl/distinfo | 6 | ||||
| -rw-r--r-- | biology/p5-BioPerl/pkg-plist | 16 |
3 files changed, 5 insertions, 20 deletions
diff --git a/biology/p5-BioPerl/Makefile b/biology/p5-BioPerl/Makefile index 5c42404971b3..6147a19796cb 100644 --- a/biology/p5-BioPerl/Makefile +++ b/biology/p5-BioPerl/Makefile @@ -3,11 +3,12 @@ PORTNAME= BioPerl PORTVERSION= 1.007005 +PORTREVISION= 1 CATEGORIES= biology perl5 MASTER_SITES= CPAN MASTER_SITE_SUBDIR= CPAN:CDRAUG PKGNAMEPREFIX= p5- -DISTNAME= ${PORTNAME}-1.7.4 +DISTNAME= ${PORTNAME}-${PORTVERSION:R}${PORTVERSION:E:S|00|.|g} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Collection of Perl modules for bioinformatics diff --git a/biology/p5-BioPerl/distinfo b/biology/p5-BioPerl/distinfo index 82cf73de6533..a7180cfa9733 100644 --- a/biology/p5-BioPerl/distinfo +++ b/biology/p5-BioPerl/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1550843244 -SHA256 (BioPerl-1.7.4.tar.gz) = 5a074947bba299cdb47cbf1c66689502db02c022fc138459e3393da45d7c707b -SIZE (BioPerl-1.7.4.tar.gz) = 7642013 +TIMESTAMP = 1565523237 +SHA256 (BioPerl-1.7.5.tar.gz) = 4a96472004e35e11eafd1fa3b3966f1d18622de3afde3e2fa6765a2dbedb3a0a +SIZE (BioPerl-1.7.5.tar.gz) = 7512326 diff --git a/biology/p5-BioPerl/pkg-plist b/biology/p5-BioPerl/pkg-plist index 97c4e41e39a4..244f0c123a1d 100644 --- a/biology/p5-BioPerl/pkg-plist +++ b/biology/p5-BioPerl/pkg-plist @@ -329,7 +329,6 @@ bin/bp_unflatten_seq %%SITE_PERL%%/Bio/Seq/SeqBuilder.pm %%SITE_PERL%%/Bio/Seq/SeqFactory.pm %%SITE_PERL%%/Bio/Seq/SeqFastaSpeedFactory.pm -%%SITE_PERL%%/Bio/Seq/SeqWithQuality.pm %%SITE_PERL%%/Bio/Seq/SequenceTrace.pm %%SITE_PERL%%/Bio/Seq/SimulatedRead.pm %%SITE_PERL%%/Bio/Seq/TraceI.pm @@ -412,13 +411,6 @@ bin/bp_unflatten_seq %%SITE_PERL%%/Bio/SimpleAlign.pm %%SITE_PERL%%/Bio/SimpleAnalysisI.pm %%SITE_PERL%%/Bio/Species.pm -%%SITE_PERL%%/Bio/Symbol/Alphabet.pm -%%SITE_PERL%%/Bio/Symbol/AlphabetI.pm -%%SITE_PERL%%/Bio/Symbol/DNAAlphabet.pm -%%SITE_PERL%%/Bio/Symbol/ProteinAlphabet.pm -%%SITE_PERL%%/Bio/Symbol/README.Symbol -%%SITE_PERL%%/Bio/Symbol/Symbol.pm -%%SITE_PERL%%/Bio/Symbol/SymbolI.pm %%SITE_PERL%%/Bio/Taxon.pm %%SITE_PERL%%/Bio/Tools/Alignment/Consed.pm %%SITE_PERL%%/Bio/Tools/Alignment/Trim.pm @@ -474,7 +466,6 @@ bin/bp_unflatten_seq %%SITE_PERL%%/Bio/Tools/Run/GenericParameters.pm %%SITE_PERL%%/Bio/Tools/Run/ParametersI.pm %%SITE_PERL%%/Bio/Tools/Run/Phylo/PhyloBase.pm -%%SITE_PERL%%/Bio/Tools/Run/README %%SITE_PERL%%/Bio/Tools/Run/WrapperBase.pm %%SITE_PERL%%/Bio/Tools/Run/WrapperBase/CommandExts.pm %%SITE_PERL%%/Bio/Tools/Seg.pm @@ -852,7 +843,6 @@ bin/bp_unflatten_seq %%PERL5_MAN3%%/Bio::Seq::SeqBuilder.3.gz %%PERL5_MAN3%%/Bio::Seq::SeqFactory.3.gz %%PERL5_MAN3%%/Bio::Seq::SeqFastaSpeedFactory.3.gz -%%PERL5_MAN3%%/Bio::Seq::SeqWithQuality.3.gz %%PERL5_MAN3%%/Bio::Seq::SequenceTrace.3.gz %%PERL5_MAN3%%/Bio::Seq::SimulatedRead.3.gz %%PERL5_MAN3%%/Bio::Seq::TraceI.3.gz @@ -935,12 +925,6 @@ bin/bp_unflatten_seq %%PERL5_MAN3%%/Bio::SimpleAlign.3.gz %%PERL5_MAN3%%/Bio::SimpleAnalysisI.3.gz %%PERL5_MAN3%%/Bio::Species.3.gz -%%PERL5_MAN3%%/Bio::Symbol::Alphabet.3.gz -%%PERL5_MAN3%%/Bio::Symbol::AlphabetI.3.gz -%%PERL5_MAN3%%/Bio::Symbol::DNAAlphabet.3.gz -%%PERL5_MAN3%%/Bio::Symbol::ProteinAlphabet.3.gz -%%PERL5_MAN3%%/Bio::Symbol::Symbol.3.gz -%%PERL5_MAN3%%/Bio::Symbol::SymbolI.3.gz %%PERL5_MAN3%%/Bio::Taxon.3.gz %%PERL5_MAN3%%/Bio::Tools::Alignment::Consed.3.gz %%PERL5_MAN3%%/Bio::Tools::Alignment::Trim.3.gz |