1 files changed, 32 insertions, 0 deletions

diff --git a/biology/p5-transdecoder/pkg-plist b/biology/p5-transdecoder/pkg-plist
new file mode 100644
index 000000000000..d394d7fa2914
--- /dev/null
+++ b/biology/p5-transdecoder/pkg-plist
@@ -0,0 +1,32 @@
+bin/TransDecoder.LongOrfs
+bin/TransDecoder.LongOrfs.bak
+bin/TransDecoder.Predict
+bin/TransDecoder.Predict.bak
+%%SITE_PERL%%/transdecoder/Fasta_reader.pm
+%%SITE_PERL%%/transdecoder/Fasta_retriever.pm
+%%SITE_PERL%%/transdecoder/GFF3_utils.pm
+%%SITE_PERL%%/transdecoder/Gene_obj.pm
+%%SITE_PERL%%/transdecoder/Gene_obj_indexer.pm
+%%SITE_PERL%%/transdecoder/Longest_orf.pm
+%%SITE_PERL%%/transdecoder/Nuc_translator.pm
+%%SITE_PERL%%/transdecoder/TiedHash.pm
+libexec/transdecoder/cdna_alignment_orf_to_genome_orf.pl
+libexec/transdecoder/compute_base_probs.pl
+libexec/transdecoder/create_start_PSSM.pl
+libexec/transdecoder/cufflinks_gtf_genome_to_cdna_fasta.pl
+libexec/transdecoder/cufflinks_gtf_to_alignment_gff3.pl
+libexec/transdecoder/cufflinks_gtf_to_bed.pl
+libexec/transdecoder/extract_FL_subset.pl
+libexec/transdecoder/ffindex_resume.pl
+libexec/transdecoder/gene_list_to_gff.pl
+libexec/transdecoder/get_FL_accs.pl
+libexec/transdecoder/get_longest_ORF_per_transcript.pl
+libexec/transdecoder/get_top_longest_fasta_entries.pl
+libexec/transdecoder/gff3_file_to_bed.pl
+libexec/transdecoder/gff3_file_to_proteins.pl
+libexec/transdecoder/index_gff3_files_by_isoform.pl
+libexec/transdecoder/nr_ORFs_gff3.pl
+libexec/transdecoder/pfam_runner.pl
+libexec/transdecoder/remove_eclipsed_ORFs.pl
+libexec/transdecoder/score_CDS_liklihood_all_6_frames.pl
+libexec/transdecoder/seq_n_baseprobs_to_logliklihood_vals.pl