3 files changed, 1129 insertions, 1070 deletions

diff --git a/biology/py-biopython/Makefile b/biology/py-biopython/Makefile
index a08c1eebc8e9..561c778bca29 100644
--- a/biology/py-biopython/Makefile
+++ b/biology/py-biopython/Makefile
@@ -6,7 +6,7 @@
 #
 
 PORTNAME=	biopython
-PORTVERSION=	1.57
+PORTVERSION=	1.59
 CATEGORIES=	biology python
 MASTER_SITES=	http://www.biopython.org/DIST/
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
@@ -15,10 +15,11 @@ MAINTAINER=	mauricio@arareko.net
 COMMENT=	A collection of Python modules for bioinformatics
 
 BUILD_DEPENDS=	${PYNUMPY}
-RUN_DEPENDS=	${BUILD_DEPENDS}
+RUN_DEPENDS=	${PYNUMPY}
 
-USE_PYTHON=	2.5+
-USE_PYDISTUTILS=yes
+USE_PYTHON=		2.5-2.7
+USE_PYDISTUTILS=	easy_install
+PYEASYINSTALL_ARCHDEP=	yes
 
 .if !defined(WITHOUT_REPORTLAB)
 BUILD_DEPENDS+=	${PYTHON_SITELIBDIR}/reportlab/__init__.py:${PORTSDIR}/print/py-reportlab
diff --git a/biology/py-biopython/distinfo b/biology/py-biopython/distinfo
index 0e12b09b232a..19b39c256489 100644
--- a/biology/py-biopython/distinfo
+++ b/biology/py-biopython/distinfo
@@ -1,2 +1,2 @@
-SHA256 (biopython-1.57.tar.gz) = 07c16a86127770c8d5b653a6e82fee0999159f7284a3a01c98cf66ed2f0ec4a0
-SIZE (biopython-1.57.tar.gz) = 6945024
+SHA256 (biopython-1.59.tar.gz) = 588abf55de3d8e4deac611a0f810a9c5d9ce7e5868d3064f79efe6cabd18cacb
+SIZE (biopython-1.59.tar.gz) = 8577492
diff --git a/biology/py-biopython/pkg-plist b/biology/py-biopython/pkg-plist
index d28ea882ada8..c7110c830f04 100644
--- a/biology/py-biopython/pkg-plist
+++ b/biology/py-biopython/pkg-plist
@@ -1,1064 +1,1122 @@
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-%%PYTHON_SITELIBDIR%%/Bio/Affy/__init__.py
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