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| author | Jason W. Bacon <jwb@FreeBSD.org> | 2022-02-03 12:37:38 +0000 |
|---|---|---|
| committer | Jason W. Bacon <jwb@FreeBSD.org> | 2022-02-03 12:37:38 +0000 |
| commit | 2b1ef5b34e0ee73661c0b9755f4e6806de1095d5 (patch) | |
| tree | da40f8a2a0bd5f486a12436651fc0899ab0ebced /biology/py-dna-features-viewer | |
| parent | 714d30ce9a6a72a515e6e3a243450c7a576e8e2a (diff) | |
| download | ports-2b1ef5b34e0ee73661c0b9755f4e6806de1095d5.tar.gz ports-2b1ef5b34e0ee73661c0b9755f4e6806de1095d5.zip | |
Diffstat (limited to 'biology/py-dna-features-viewer')
| -rw-r--r-- | biology/py-dna-features-viewer/Makefile | 20 | ||||
| -rw-r--r-- | biology/py-dna-features-viewer/distinfo | 3 | ||||
| -rw-r--r-- | biology/py-dna-features-viewer/pkg-descr | 12 |
3 files changed, 35 insertions, 0 deletions
diff --git a/biology/py-dna-features-viewer/Makefile b/biology/py-dna-features-viewer/Makefile new file mode 100644 index 000000000000..7ea1d63d46e6 --- /dev/null +++ b/biology/py-dna-features-viewer/Makefile @@ -0,0 +1,20 @@ +PORTNAME= dna-features-viewer +DISTVERSION= 3.1.0 +CATEGORIES= biology python +MASTER_SITES= CHEESESHOP +PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} +DISTNAME= dna_features_viewer-${PORTVERSION} + +MAINTAINER= jwb@FreeBSD.org +COMMENT= Python library to visualize DNA features, e.g. GenBank or Gff files + +LICENSE= MIT +LICENSE_FILE= ${WRKSRC}/LICENCE.txt + +RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}matplotlib>=3:math/py-matplotlib@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}biopython>0:biology/py-biopython@${PY_FLAVOR} + +USES= python +USE_PYTHON= autoplist distutils + +.include <bsd.port.mk> diff --git a/biology/py-dna-features-viewer/distinfo b/biology/py-dna-features-viewer/distinfo new file mode 100644 index 000000000000..8131a2c7de96 --- /dev/null +++ b/biology/py-dna-features-viewer/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1643841661 +SHA256 (dna_features_viewer-3.1.0.tar.gz) = 1430bbd861b4fa4a1855fb9554577bc1b2e969a6d1921882bb2de56902cd63ca +SIZE (dna_features_viewer-3.1.0.tar.gz) = 34795 diff --git a/biology/py-dna-features-viewer/pkg-descr b/biology/py-dna-features-viewer/pkg-descr new file mode 100644 index 000000000000..367dce2c930c --- /dev/null +++ b/biology/py-dna-features-viewer/pkg-descr @@ -0,0 +1,12 @@ +DNA Features Viewer is a Python library to visualize DNA features, e.g. +from GenBank or Gff files. + +DNA Features Viewer can plot sequence maps linearly or circularly, with +or without nucleotide sequence and amino-acid sequences. The plotter +automatically produces clear plots even for sequences with many +overlapping features and long labels. The library plays well with +Matplotlib and Biopython, and the figures can be saved in different +formats (PNG, JPEG, SVG, PDF), e.g. for report generation or LIMS +interfaces. + +WWW: https://pypi.python.org/project/dna-features-viewer/ |