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authorJason W. Bacon <jwb@FreeBSD.org>2018-03-31 13:16:05 +0000
committerJason W. Bacon <jwb@FreeBSD.org>2018-03-31 13:16:05 +0000
commit56d5a1146ff6fd435092314bc591fe070997ea79 (patch)
tree603154866b5c6162281c68380cfbfe60e15868c0 /biology/stacks/pkg-plist
parent1050f7a8e925734ef9aedece3735422a82ac5609 (diff)
downloadports-56d5a1146ff6fd435092314bc591fe070997ea79.tar.gz
ports-56d5a1146ff6fd435092314bc591fe070997ea79.zip
Notes
Diffstat (limited to 'biology/stacks/pkg-plist')
-rw-r--r--biology/stacks/pkg-plist70
1 files changed, 70 insertions, 0 deletions
diff --git a/biology/stacks/pkg-plist b/biology/stacks/pkg-plist
new file mode 100644
index 000000000000..4f85229d528c
--- /dev/null
+++ b/biology/stacks/pkg-plist
@@ -0,0 +1,70 @@
+bin/clone_filter
+bin/count_fixed_catalog_snps.py
+bin/cstacks
+bin/denovo_map.pl
+bin/exec_velvet.pl
+bin/export_sql.pl
+bin/genotypes
+bin/index_radtags.pl
+bin/integrate_alignments.py
+bin/kmer_filter
+bin/load_radtags.pl
+bin/load_sequences.pl
+bin/phasedstacks
+bin/populations
+bin/process_radtags
+bin/process_shortreads
+bin/pstacks
+bin/ref_map.pl
+bin/rxstacks
+bin/sort_read_pairs.pl
+bin/sstacks
+bin/stacks_export_notify.pl
+bin/ustacks
+%%DATADIR%%/php/CatalogClass.php
+%%DATADIR%%/php/Locus.php
+%%DATADIR%%/php/ajax.js
+%%DATADIR%%/php/annotate.js
+%%DATADIR%%/php/annotate_marker.php
+%%DATADIR%%/php/catalog.php
+%%DATADIR%%/php/catalog_genotypes.php
+%%DATADIR%%/php/constants.php.dist
+%%DATADIR%%/php/correct_genotype.php
+%%DATADIR%%/php/correct_genotypes.php
+%%DATADIR%%/php/db_functions.php
+%%DATADIR%%/php/export.js
+%%DATADIR%%/php/export_batch.php
+%%DATADIR%%/php/fst_view.php
+%%DATADIR%%/php/hapstat_view.php
+%%DATADIR%%/php/header.php
+%%DATADIR%%/php/images/caret-d.png
+%%DATADIR%%/php/images/caret-u.png
+%%DATADIR%%/php/images/excel_icon.png
+%%DATADIR%%/php/images/l-arrow-disabled.png
+%%DATADIR%%/php/images/l-arrow.png
+%%DATADIR%%/php/images/r-arrow-disabled.png
+%%DATADIR%%/php/images/r-arrow.png
+%%DATADIR%%/php/images/stacks_bg.png
+%%DATADIR%%/php/images/stacks_logo_rev_small.png
+%%DATADIR%%/php/index.php
+%%DATADIR%%/php/last_modified.php
+%%DATADIR%%/php/phist_view.php
+%%DATADIR%%/php/pop_view.php
+%%DATADIR%%/php/population_view.js
+%%DATADIR%%/php/samples.php
+%%DATADIR%%/php/sequence_blast.php
+%%DATADIR%%/php/stack_view.php
+%%DATADIR%%/php/stacks.css
+%%DATADIR%%/php/stacks.js
+%%DATADIR%%/php/stacks_functions.php
+%%DATADIR%%/php/sumstat_view.php
+%%DATADIR%%/php/tag.php
+%%DATADIR%%/php/tags.php
+%%DATADIR%%/php/version.php
+%%DATADIR%%/php/view_sequence.php
+%%DATADIR%%/sql/catalog_index.sql
+%%DATADIR%%/sql/chr_index.sql
+%%DATADIR%%/sql/mysql.cnf.dist
+%%DATADIR%%/sql/stacks.sql
+%%DATADIR%%/sql/tag_index.sql
+@dir %%DATADIR%%/php/export