diff options
| author | Yuri Victorovich <yuri@FreeBSD.org> | 2020-12-06 20:14:53 +0000 |
|---|---|---|
| committer | Yuri Victorovich <yuri@FreeBSD.org> | 2020-12-06 20:14:53 +0000 |
| commit | d47e2761a456a0cdadf01bd90c9bd76650da0fa3 (patch) | |
| tree | 3e1ca9040ca6c6e82c1625970f8b79486c020541 /biology/viennarna | |
| parent | c2c7f602633a3d5e7c8b7511a9e6c305b1b488cc (diff) | |
| download | ports-d47e2761a456a0cdadf01bd90c9bd76650da0fa3.tar.gz ports-d47e2761a456a0cdadf01bd90c9bd76650da0fa3.zip | |
Notes
Diffstat (limited to 'biology/viennarna')
| -rw-r--r-- | biology/viennarna/Makefile | 2 | ||||
| -rw-r--r-- | biology/viennarna/distinfo | 6 | ||||
| -rw-r--r-- | biology/viennarna/files/patch-src_bin_Makefile.in | 13 | ||||
| -rw-r--r-- | biology/viennarna/pkg-plist | 2 |
4 files changed, 6 insertions, 17 deletions
diff --git a/biology/viennarna/Makefile b/biology/viennarna/Makefile index abe2ce6557ad..574f24100b2e 100644 --- a/biology/viennarna/Makefile +++ b/biology/viennarna/Makefile @@ -1,7 +1,7 @@ # $FreeBSD$ PORTNAME= viennarna -DISTVERSION= 2.4.16 +DISTVERSION= 2.4.17 CATEGORIES= biology MASTER_SITES= https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_4_x/ DISTNAME= ViennaRNA-${DISTVERSION} diff --git a/biology/viennarna/distinfo b/biology/viennarna/distinfo index ec4e5341ea70..38bc392a9d63 100644 --- a/biology/viennarna/distinfo +++ b/biology/viennarna/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1605136528 -SHA256 (ViennaRNA-2.4.16.tar.gz) = 4544211cf54d21a005256119aeee5db38b07bef8f7755711aca88d2f84d26f62 -SIZE (ViennaRNA-2.4.16.tar.gz) = 38820696 +TIMESTAMP = 1607284784 +SHA256 (ViennaRNA-2.4.17.tar.gz) = b1e608f6f37cdf4adbcdd1f86fd9ebfcc1e663d58488e0f8173a58879480c121 +SIZE (ViennaRNA-2.4.17.tar.gz) = 34680460 diff --git a/biology/viennarna/files/patch-src_bin_Makefile.in b/biology/viennarna/files/patch-src_bin_Makefile.in deleted file mode 100644 index 6021b62b7675..000000000000 --- a/biology/viennarna/files/patch-src_bin_Makefile.in +++ /dev/null @@ -1,13 +0,0 @@ ---- src/bin/Makefile.in.orig 2019-06-24 04:33:32 UTC -+++ src/bin/Makefile.in -@@ -104,8 +104,8 @@ bin_PROGRAMS = RNAfold$(EXEEXT) RNAeval$(EXEEXT) RNAhe - RNAparconv$(EXEEXT) RNAPKplex$(EXEEXT) RNAplex$(EXEEXT) \ - RNAsnoop$(EXEEXT) RNApvmin$(EXEEXT) - @VRNA_AM_SWITCH_MPFR_TRUE@am__append_4 = $(MPFR_LIBS) --@VRNA_AM_SWITCH_SVM_TRUE@am__append_5 = -lstdc++ --@VRNA_AM_SWITCH_SVM_TRUE@am__append_6 = -lstdc++ -+@VRNA_AM_SWITCH_SVM_TRUE@am__append_5 = -lc++ -+@VRNA_AM_SWITCH_SVM_TRUE@am__append_6 = -lc++ - subdir = src/bin - ACLOCAL_M4 = $(top_srcdir)/aclocal.m4 - am__aclocal_m4_deps = $(top_srcdir)/m4/ac_rna.m4 \ diff --git a/biology/viennarna/pkg-plist b/biology/viennarna/pkg-plist index d94e5f70805e..ee8acf82cc2f 100644 --- a/biology/viennarna/pkg-plist +++ b/biology/viennarna/pkg-plist @@ -88,6 +88,7 @@ include/ViennaRNA/fold_vars.h include/ViennaRNA/gquad.h include/ViennaRNA/grammar.h include/ViennaRNA/hairpin_loops.h +include/ViennaRNA/heat_capacity.h include/ViennaRNA/interior_loops.h include/ViennaRNA/inverse.h include/ViennaRNA/io/file_formats.h @@ -167,6 +168,7 @@ include/ViennaRNA/utils/svm.h include/ViennaRNA/utils/units.h include/ViennaRNA/vrna_config.h include/ViennaRNA/walk.h +include/ViennaRNA/zscore.h include/g2.h include/g2_FIG.h include/g2_PS.h |