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authorBrendan Fabeny <bf@FreeBSD.org>2013-09-29 08:54:39 +0000
committerBrendan Fabeny <bf@FreeBSD.org>2013-09-29 08:54:39 +0000
commit410f653bbbea8f1f4f13bf1699edda6d4873b318 (patch)
tree6252b1b9b1f38ef7c8250e2b6ef1eef2fd29053a /math/jags
parent1f5467cabc8c39f68527fa70a97c7639e6733008 (diff)
downloadports-410f653bbbea8f1f4f13bf1699edda6d4873b318.tar.gz
ports-410f653bbbea8f1f4f13bf1699edda6d4873b318.zip
Update to 3.4.0
PR: 181873
Notes
Notes: svn path=/head/; revision=328652
Diffstat (limited to 'math/jags')
-rw-r--r--math/jags/Makefile16
-rw-r--r--math/jags/distinfo8
2 files changed, 13 insertions, 11 deletions
diff --git a/math/jags/Makefile b/math/jags/Makefile
index 47f54ef9c554..b2bd72cf44af 100644
--- a/math/jags/Makefile
+++ b/math/jags/Makefile
@@ -2,7 +2,7 @@
# $FreeBSD$
PORTNAME= mcmc-jags
-PORTVERSION= 3.3.0
+PORTVERSION= 3.4.0
CATEGORIES= math
MASTER_SITES= SF:1,2,3,4
MASTER_SITE_SUBDIR= mcmc-jags/JAGS/${S}.x/Source/:1 \
@@ -18,7 +18,7 @@ COMMENT= Just Another Gibbs Sampler
LICENSE= GPLv2
GNU_CONFIGURE= yes
-USES= bison
+USES= bison gmake
USE_FORTRAN= yes
USE_LDCONFIG= yes
@@ -51,11 +51,11 @@ WITH_BLAS?= reference
.endif
.if ${WITH_BLAS} == "atlas"
-LIB_DEPENDS+= atlas:${PORTSDIR}/math/atlas
+LIB_DEPENDS+= libatlas.so:${PORTSDIR}/math/atlas
CONFIGURE_ARGS= --with-lapack="-lalapack -lptcblas" --with-blas="-lptf77blas"
.elif ${WITH_BLAS} == "reference"
-LIB_DEPENDS+= blas:${PORTSDIR}/math/blas
-LIB_DEPENDS+= lapack:${PORTSDIR}/math/lapack
+LIB_DEPENDS+= libblas.so:${PORTSDIR}/math/blas
+LIB_DEPENDS+= liblapack.so:${PORTSDIR}/math/lapack
CONFIGURE_ARGS= --with-lapack="-llapack" --with-blas="-lblas"
.else
IGNORE = : invalid value for WITH_BLAS: ${WITH_BLAS}
@@ -94,9 +94,11 @@ BUILD_DEPENDS+= ${LOCALBASE}/lib/R/library/coda/R/coda.rdb:${PORTSDIR}/math/R-cr
check test: install
.for i in 1 2
- cd ${WRKDIR}/classic-bugs/vol${i}; ${SETENV} ${MAKE_ENV} \
- ${MAKE} ${_MAKE_JOBS} ${MAKE_ARGS} check
+ @cd ${WRKDIR}/classic-bugs/vol${i}; ${SETENV} ${MAKE_ENV} \
+ ${MAKE_CMD} ${MAKE_ARGS} check
.endfor
+ @${FIND} ${WRKDIR}/classic-bugs -type f -name check.log | ${SORT} | \
+ ${XARGS} -tI @ ${CAT} @
.endif
.include <bsd.port.mk>
diff --git a/math/jags/distinfo b/math/jags/distinfo
index 7eb1eb180a65..e920cdc03af5 100644
--- a/math/jags/distinfo
+++ b/math/jags/distinfo
@@ -1,10 +1,10 @@
-SHA256 (mcmc-jags/JAGS-3.3.0.tar.gz) = 8a3755c8e8cd5a2d68a465d56f054f1380fa7e2b602bfe65d360eb23e5b6101a
-SIZE (mcmc-jags/JAGS-3.3.0.tar.gz) = 1672361
+SHA256 (mcmc-jags/JAGS-3.4.0.tar.gz) = 2beaa9a2672c2c95efc55ffa4c8b597a872f20232373daebd17ad539d3d7d82b
+SIZE (mcmc-jags/JAGS-3.4.0.tar.gz) = 1677450
SHA256 (mcmc-jags/jags_developer_manual.pdf) = 6e7c707b94ffc931807198cc162e8b254859bb774695ae39ef1c1c175560259b
SIZE (mcmc-jags/jags_developer_manual.pdf) = 71319
SHA256 (mcmc-jags/jags_installation_manual.pdf) = 4b339af679186783f1bcfc1c31483238cbd46eb9f1f31eb853da51dae61cb3e5
SIZE (mcmc-jags/jags_installation_manual.pdf) = 167002
SHA256 (mcmc-jags/jags_user_manual.pdf) = febaf9b22cee57c2fc688a16969d3ddeaa83c1dee7915b872a6cf6772b1f9958
SIZE (mcmc-jags/jags_user_manual.pdf) = 325886
-SHA256 (mcmc-jags/classic-bugs.tar.gz) = ae6f9e25f00a3c2bf2d67c8b3fe040f937551ef75407ae0bd8cad5cbc3a8f768
-SIZE (mcmc-jags/classic-bugs.tar.gz) = 81419
+SHA256 (mcmc-jags/classic-bugs.tar.gz) = eee97e64f06189a13f6fdee738ea65db088eafa63a5eddedeef66c685f920bae
+SIZE (mcmc-jags/classic-bugs.tar.gz) = 83112