3 files changed, 36 insertions, 11 deletions

diff --git a/science/agrum/Makefile b/science/agrum/Makefile
index a561a6a106ab..179166643420 100644
--- a/science/agrum/Makefile
+++ b/science/agrum/Makefile
@@ -1,7 +1,7 @@
 # $FreeBSD$
 
 PORTNAME=	agrum
-DISTVERSION=	0.17.3
+DISTVERSION=	0.18.0
 CATEGORIES=	science math
 
 MAINTAINER=	yuri@FreeBSD.org
@@ -17,7 +17,7 @@ LLD_UNSAFE=	yes
 
 GL_ACCOUNT=	agrumery
 GL_PROJECT=	aGrUM
-GL_COMMIT=	5cfa32ca256250fe7deef11b7fd0c8da68ffa66d
+GL_COMMIT=	526a9cd8dcbdaee3b0cbbfcb0551511e74a0998f
 
 CMAKE_OFF=	USE_SWIG
 
diff --git a/science/agrum/distinfo b/science/agrum/distinfo
index 6d31e507624c..0a2d7dcfa53b 100644
--- a/science/agrum/distinfo
+++ b/science/agrum/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1590458583
-SHA256 (agrumery-aGrUM-5cfa32ca256250fe7deef11b7fd0c8da68ffa66d_GL0.tar.gz) = 6e44fb1518a923d7a44a5b8f64f122df8d3d3332ad10aea6d102fdcddf183ceb
-SIZE (agrumery-aGrUM-5cfa32ca256250fe7deef11b7fd0c8da68ffa66d_GL0.tar.gz) = 14515975
+TIMESTAMP = 1592207534
+SHA256 (agrumery-aGrUM-526a9cd8dcbdaee3b0cbbfcb0551511e74a0998f_GL0.tar.gz) = 9731d813d04f626958078258021cc1a2ed3fc8743336b459c27989937503ede8
+SIZE (agrumery-aGrUM-526a9cd8dcbdaee3b0cbbfcb0551511e74a0998f_GL0.tar.gz) = 15277054
diff --git a/science/agrum/pkg-plist b/science/agrum/pkg-plist
index 3cceb3bbb7c4..abf79c2f0e84 100644
--- a/science/agrum/pkg-plist
+++ b/science/agrum/pkg-plist
@@ -64,6 +64,8 @@ include/agrum/BN/inference/loopySamplingInference.h
 include/agrum/BN/inference/loopySamplingInference_tpl.h
 include/agrum/BN/inference/tools/BayesNetInference.h
 include/agrum/BN/inference/tools/BayesNetInference_tpl.h
+include/agrum/BN/inference/tools/aggregatorDecomposition.h
+include/agrum/BN/inference/tools/aggregatorDecomposition_tpl.h
 include/agrum/BN/inference/tools/approximateInference.h
 include/agrum/BN/inference/tools/estimator.h
 include/agrum/BN/inference/tools/estimator_tpl.h
@@ -102,10 +104,10 @@ include/agrum/BN/io/DSL/DSLWriter.h
 include/agrum/BN/io/DSL/DSLWriter_tpl.h
 include/agrum/BN/io/DSL/cocoR/Parser.h
 include/agrum/BN/io/DSL/cocoR/Scanner.h
-include/agrum/BN/io/UAI/UAIReader.h
-include/agrum/BN/io/UAI/UAIReader_tpl.h
-include/agrum/BN/io/UAI/UAIWriter.h
-include/agrum/BN/io/UAI/UAIWriter_tpl.h
+include/agrum/BN/io/UAI/UAIBNReader.h
+include/agrum/BN/io/UAI/UAIBNReader_tpl.h
+include/agrum/BN/io/UAI/UAIBNWriter.h
+include/agrum/BN/io/UAI/UAIBNWriter_tpl.h
 include/agrum/BN/io/UAI/cocoR/Parser.h
 include/agrum/BN/io/UAI/cocoR/Scanner.h
 include/agrum/BN/io/cnf/CNFWriter.h
@@ -321,6 +323,26 @@ include/agrum/MN/IMarkovNet.h
 include/agrum/MN/IMarkovNet_tpl.h
 include/agrum/MN/MarkovNet.h
 include/agrum/MN/MarkovNet_tpl.h
+include/agrum/MN/inference/ShaferShenoyMNInference.h
+include/agrum/MN/inference/ShaferShenoyMNInference_tpl.h
+include/agrum/MN/inference/tools/MarkovNetInference.h
+include/agrum/MN/inference/tools/MarkovNetInference_tpl.h
+include/agrum/MN/inference/tools/evidenceMNInference.h
+include/agrum/MN/inference/tools/evidenceMNInference_tpl.h
+include/agrum/MN/inference/tools/jointTargetedMNInference.h
+include/agrum/MN/inference/tools/jointTargetedMNInference_tpl.h
+include/agrum/MN/inference/tools/marginalTargetedMNInference.h
+include/agrum/MN/inference/tools/marginalTargetedMNInference_tpl.h
+include/agrum/MN/io/MNReader.h
+include/agrum/MN/io/MNReader_tpl.h
+include/agrum/MN/io/MNWriter.h
+include/agrum/MN/io/MNWriter_tpl.h
+include/agrum/MN/io/UAI/UAIMNReader.h
+include/agrum/MN/io/UAI/UAIMNReader_tpl.h
+include/agrum/MN/io/UAI/UAIMNWriter.h
+include/agrum/MN/io/UAI/UAIMNWriter_tpl.h
+include/agrum/MN/io/UAI/cocoR/Parser.h
+include/agrum/MN/io/UAI/cocoR/Scanner.h
 include/agrum/PRM/IPRMFactory.h
 include/agrum/PRM/PRM.h
 include/agrum/PRM/PRMFactory.h
@@ -713,6 +735,8 @@ include/agrum/tools/multidim/aggregators/multiDimAggregator.h
 include/agrum/tools/multidim/aggregators/multiDimAggregator_tpl.h
 include/agrum/tools/multidim/aggregators/or.h
 include/agrum/tools/multidim/aggregators/or_tpl.h
+include/agrum/tools/multidim/aggregators/sum.h
+include/agrum/tools/multidim/aggregators/sum_tpl.h
 include/agrum/tools/multidim/implementations/multiDimAdressable.h
 include/agrum/tools/multidim/implementations/multiDimAdressable_inl.h
 include/agrum/tools/multidim/implementations/multiDimArray.h
@@ -849,7 +873,7 @@ lib/cmake/aGrUM/agrum-targets-%%CMAKE_BUILD_TYPE%%.cmake
 lib/cmake/aGrUM/agrum-targets.cmake
 lib/libagrum.so
 lib/libagrum.so.0
-lib/libagrum.so.0.17.3
+lib/libagrum.so.0.18.0
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum-%%VERSION%%-py%%PYTHON_VER_MAJ%%.egg-info
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum-%%VERSION%%.dist-info/METADATA
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum-%%VERSION%%.dist-info/WHEEL
@@ -869,7 +893,6 @@ lib/libagrum.so.0.17.3
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/config.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/defaults.ini
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/deprecated.py
-%%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/functions.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/__init__.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/_utils/__init__.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/_utils/oslike.py
@@ -883,7 +906,9 @@ lib/libagrum.so.0.17.3
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/classifier.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/dynamicBN.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/ipython.py
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/mn2graph.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/notebook.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/pretty_print.py
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/lib/proba_histogram.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/pyAgrum/pyAgrum.py
 libdata/pkgconfig/agrum.pc