Upgrade to 6.0.1.

Changelog at <https://github.com/code-saturne/code_saturne/blob/v6.0/NEWS.md>.

6 files changed, 562 insertions, 232 deletions

diff --git a/science/code_saturne/Makefile b/science/code_saturne/Makefile
index 551180dc079b..7f3ef8732519 100644
--- a/science/code_saturne/Makefile
+++ b/science/code_saturne/Makefile
@@ -2,8 +2,7 @@
 # $FreeBSD$
 
 PORTNAME=	code_saturne
-PORTVERSION=	5.3.3
-PORTREVISION=	2
+PORTVERSION=	6.0.1
 DISTVERSIONPREFIX=	v
 CATEGORIES=	science parallel
 
@@ -18,7 +17,8 @@ LIB_DEPENDS=	libsysinfo.so:devel/libsysinfo	\
 		libhdf5.so:science/hdf5		\
 		libomp.so:devel/openmp		\
 		libmedC.so:french/med
-RUN_DEPENDS=	xmgrace:math/grace	\
+RUN_DEPENDS=	${PYTHON_PKGNAMEPREFIX}matplotlib>0:math/py-matplotlib@${PY_FLAVOR}	\
+		xmgrace:math/grace	\
 		bash:shells/bash	\
 		xterm:x11/xterm
 
@@ -33,17 +33,20 @@ USE_PYQT=	core gui sip widgets xml_build
 SHEBANG_FILES=	install_saturne.py tests/unittests.py bin/*.py build-aux/*.py
 CPPFLAGS+=	-I${LOCALBASE}/include -I${LOCALBASE}/include/libxml2
 GNU_CONFIGURE=	yes
+CONFIGURE_ARGS=	--without-salome --without-salome-yacs --without-salome-kernel	\
+		--without-salome-gui
 USE_LDCONFIG=	yes
 BINARY_ALIAS=	python=${PYTHON_CMD} \
 		pyrcc5=pyrcc5-${PYTHON_VER} \
 		pyuic5=pyuic5-${PYTHON_VER}
 
-OPTIONS_DEFINE=		DOCS EXAMPLES ATLAS BATCH MPI
-OPTIONS_DEFAULT=	BATCH MPI METIS
+OPTIONS_DEFINE=		DOCS EXAMPLES BATCH BLAS MPI
+OPTIONS_DEFAULT=	BATCH BLAS MPI METIS
 OPTIONS_RADIO=		METIS
 OPTIONS_RADIO_METIS=	METIS PARMETIS
-ATLAS_USES=		blaslapack:atlas
-ATLAS_CONFIGURE_ON=	--with-blas=yes --with-blas-type=ATLAS
+BLAS_USES=		blaslapack
+BLAS_CONFIGURE_ON=	--with-blas=yes --with-blas-type=BLAS
+BLAS_LIB_DEPENDS=	libcblas.so:math/cblas
 BATCH_DESC=		Use Torque to submit batches
 BATCH_RUN_DEPENDS=	pbs-config:sysutils/torque
 MPI_LIB_DEPENDS=	libmpi.so:net/mpich
diff --git a/science/code_saturne/distinfo b/science/code_saturne/distinfo
index b0f245a23861..8acb4c953604 100644
--- a/science/code_saturne/distinfo
+++ b/science/code_saturne/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1557393862
-SHA256 (code-saturne-code_saturne-v5.3.3_GH0.tar.gz) = cbac0ae64551178ce0b4ac6bcc5cc6c6be007d054540263bc4df4794c56ca878
-SIZE (code-saturne-code_saturne-v5.3.3_GH0.tar.gz) = 18878277
+TIMESTAMP = 1578743688
+SHA256 (code-saturne-code_saturne-v6.0.1_GH0.tar.gz) = e6d140150c6533cf01e46257ab268f96ca9f9f57c50b514207583f93dddaf402
+SIZE (code-saturne-code_saturne-v6.0.1_GH0.tar.gz) = 19035551
diff --git a/science/code_saturne/files/patch-m4_cs__blas.m4 b/science/code_saturne/files/patch-m4_cs__blas.m4
new file mode 100644
index 000000000000..7c3f6aeafd50
--- /dev/null
+++ b/science/code_saturne/files/patch-m4_cs__blas.m4
@@ -0,0 +1,11 @@
+--- m4/cs_blas.m4.orig	2019-12-23 11:17:00 UTC
++++ m4/cs_blas.m4
+@@ -346,7 +346,7 @@ if test "x$with_blas" != "xno" ; then
+     if test "x$with_blas_libs" != "x" ; then
+       BLAS_LIBS="$with_blas_libs"
+     else
+-      BLAS_LIBS="-lblas"
++      BLAS_LIBS="-lcblas -lblas"
+     fi
+ 
+     CPPFLAGS="${saved_CPPFLAGS} ${BLAS_CPPFLAGS}"
diff --git a/science/code_saturne/files/patch-m4_cs__omniorb.m4 b/science/code_saturne/files/patch-m4_cs__omniorb.m4
new file mode 100644
index 000000000000..d71668b3df89
--- /dev/null
+++ b/science/code_saturne/files/patch-m4_cs__omniorb.m4
@@ -0,0 +1,11 @@
+--- m4/cs_omniorb.m4.orig	2019-12-23 11:17:00 UTC
++++ m4/cs_omniorb.m4
+@@ -221,7 +221,7 @@ then
+   OMNIORB_IDLPYFLAGS_1='-bpython -nf '
+   OMNIORB_IDLPYFLAGS_2=" -I${OMNIORB_ROOT}/idl"
+   OMNIORB_IDLPYFLAGS=${OMNIORB_IDLPYFLAGS_1}${OMNIORB_IDLPYFLAGS_2}
+-  for p in `cut -d: -f 1- --output-delimiter=$'\n' <<<"$PYTHONPATH"`; do
++  for p in `echo "$PYTHONPATH" | tr ':' $'\n'`; do
+     if test -f $p/omniidl_be/python.py; then
+       OMNIORB_IDLPYFLAGS="${OMNIORB_IDLPYFLAGS} -p ${p}"
+     fi
diff --git a/science/code_saturne/files/patch-m4_cs__salome.m4 b/science/code_saturne/files/patch-m4_cs__salome.m4
new file mode 100644
index 000000000000..66a668a0bc9b
--- /dev/null
+++ b/science/code_saturne/files/patch-m4_cs__salome.m4
@@ -0,0 +1,23 @@
+--- m4/cs_salome.m4.orig	2019-12-23 11:17:00 UTC
++++ m4/cs_salome.m4
+@@ -167,16 +167,16 @@ AC_LANG_SAVE
+ 
+ omniORB_ok=no # in case following test is not called
+ 
+-AS_IF([test $cs_have_salome_kernel = yes -o $cs_have_salome_gui = yes],
++AS_IF([test "x$cs_have_salome_kernel" = "xyes" -o "x$cs_have_salome_gui" = "xyes"],
+       [CS_AC_TEST_OMNIORB
+        CS_AC_TEST_CORBA])
+ 
+ AC_LANG_RESTORE
+ 
+ AM_CONDITIONAL(HAVE_SALOME,
+-               test $cs_have_salome_kernel = yes \
+-                 -a $cs_have_salome_gui = yes \
+-                 -a $omniORB_ok = yes)
++               test x$cs_have_salome_kernel = xyes \
++                 -a x$cs_have_salome_gui = xyes \
++                 -a x$omniORB_ok = xyes)
+ 
+ ])dnl
+ 
diff --git a/science/code_saturne/pkg-plist b/science/code_saturne/pkg-plist
index 73b846e07735..58e86bd94989 100644
--- a/science/code_saturne/pkg-plist
+++ b/science/code_saturne/pkg-plist
@@ -24,6 +24,7 @@ include/code_saturne/cs_1d_wall_thermal.h
 include/code_saturne/cs_1d_wall_thermal_check.h
 include/code_saturne/cs_advection_field.h
 include/code_saturne/cs_ale.h
+include/code_saturne/cs_alge_headers.h
 include/code_saturne/cs_all_to_all.h
 include/code_saturne/cs_array_reduce.h
 include/code_saturne/cs_assert.h
@@ -31,16 +32,20 @@ include/code_saturne/cs_ast_coupling.h
 include/code_saturne/cs_at_data_assim.h
 include/code_saturne/cs_at_opt_interp.h
 include/code_saturne/cs_at_plugin.h
+include/code_saturne/cs_atmo_headers.h
 include/code_saturne/cs_bad_cells_regularisation.h
 include/code_saturne/cs_balance.h
 include/code_saturne/cs_balance_by_zone.h
 include/code_saturne/cs_base.h
 include/code_saturne/cs_base_fortran.h
+include/code_saturne/cs_base_headers.h
 include/code_saturne/cs_basis_func.h
 include/code_saturne/cs_benchmark.h
+include/code_saturne/cs_bft_headers.h
 include/code_saturne/cs_blas.h
 include/code_saturne/cs_block_dist.h
 include/code_saturne/cs_block_to_part.h
+include/code_saturne/cs_boundary.h
 include/code_saturne/cs_boundary_conditions.h
 include/code_saturne/cs_boundary_zone.h
 include/code_saturne/cs_c_bindings.mod
@@ -49,12 +54,15 @@ include/code_saturne/cs_cdo_advection.h
 include/code_saturne/cs_cdo_bc.h
 include/code_saturne/cs_cdo_connect.h
 include/code_saturne/cs_cdo_diffusion.h
+include/code_saturne/cs_cdo_headers.h
 include/code_saturne/cs_cdo_local.h
 include/code_saturne/cs_cdo_main.h
 include/code_saturne/cs_cdo_quantities.h
 include/code_saturne/cs_cdo_time.h
 include/code_saturne/cs_cdofb_ac.h
+include/code_saturne/cs_cdofb_monolithic.h
 include/code_saturne/cs_cdofb_navsto.h
+include/code_saturne/cs_cdofb_predco.h
 include/code_saturne/cs_cdofb_priv.h
 include/code_saturne/cs_cdofb_scaleq.h
 include/code_saturne/cs_cdofb_uzawa.h
@@ -64,6 +72,7 @@ include/code_saturne/cs_cdovb_scaleq.h
 include/code_saturne/cs_cdovb_vecteq.h
 include/code_saturne/cs_cdovcb_scaleq.h
 include/code_saturne/cs_cf_bindings.mod
+include/code_saturne/cs_cf_model.h
 include/code_saturne/cs_cf_thermo.h
 include/code_saturne/cs_coal_incl.mod
 include/code_saturne/cs_combustion_model.h
@@ -74,15 +83,18 @@ include/code_saturne/cs_coupling.h
 include/code_saturne/cs_crystal_router.h
 include/code_saturne/cs_ctwr.h
 include/code_saturne/cs_ctwr_air_props.h
+include/code_saturne/cs_ctwr_headers.h
+include/code_saturne/cs_darc_headers.h
 include/code_saturne/cs_dbg.h
 include/code_saturne/cs_defs.h
 include/code_saturne/cs_divergence.h
 include/code_saturne/cs_domain.h
-include/code_saturne/cs_domain_boundary.h
 include/code_saturne/cs_domain_op.h
 include/code_saturne/cs_domain_setup.h
+include/code_saturne/cs_elec_headers.h
 include/code_saturne/cs_elec_model.h
 include/code_saturne/cs_equation.h
+include/code_saturne/cs_equation_assemble.h
 include/code_saturne/cs_equation_bc.h
 include/code_saturne/cs_equation_common.h
 include/code_saturne/cs_equation_iterative_solve.h
@@ -110,6 +122,7 @@ include/code_saturne/cs_grid.h
 include/code_saturne/cs_gui.h
 include/code_saturne/cs_gui_boundary_conditions.h
 include/code_saturne/cs_gui_conjugate_heat_transfer.h
+include/code_saturne/cs_gui_headers.h
 include/code_saturne/cs_gui_mesh.h
 include/code_saturne/cs_gui_mobile_mesh.h
 include/code_saturne/cs_gui_output.h
@@ -126,6 +139,10 @@ include/code_saturne/cs_gwf_tracer.h
 include/code_saturne/cs_halo.h
 include/code_saturne/cs_halo_perio.h
 include/code_saturne/cs_head_losses.h
+include/code_saturne/cs_headers.h
+include/code_saturne/cs_hgn_phase_thermo.h
+include/code_saturne/cs_hgn_source_terms_step.h
+include/code_saturne/cs_hgn_thermo.h
 include/code_saturne/cs_hho_builder.h
 include/code_saturne/cs_hho_scaleq.h
 include/code_saturne/cs_hho_stokes.h
@@ -147,15 +164,19 @@ include/code_saturne/cs_join_update.h
 include/code_saturne/cs_join_util.h
 include/code_saturne/cs_lagr.h
 include/code_saturne/cs_lagr_adh.h
+include/code_saturne/cs_lagr_agglo.h
 include/code_saturne/cs_lagr_car.h
 include/code_saturne/cs_lagr_clogging.h
 include/code_saturne/cs_lagr_coupling.h
 include/code_saturne/cs_lagr_deposition_model.h
 include/code_saturne/cs_lagr_dlvo.h
+include/code_saturne/cs_lagr_event.h
 include/code_saturne/cs_lagr_extract.h
+include/code_saturne/cs_lagr_fragmentation.h
 include/code_saturne/cs_lagr_geom.h
 include/code_saturne/cs_lagr_gradients.h
 include/code_saturne/cs_lagr_head_losses.h
+include/code_saturne/cs_lagr_headers.h
 include/code_saturne/cs_lagr_injection.h
 include/code_saturne/cs_lagr_lec.h
 include/code_saturne/cs_lagr_log.h
@@ -184,6 +205,7 @@ include/code_saturne/cs_map.h
 include/code_saturne/cs_math.h
 include/code_saturne/cs_matrix.h
 include/code_saturne/cs_matrix_assembler.h
+include/code_saturne/cs_matrix_assembler_priv.h
 include/code_saturne/cs_matrix_building.h
 include/code_saturne/cs_matrix_default.h
 include/code_saturne/cs_matrix_priv.h
@@ -203,6 +225,7 @@ include/code_saturne/cs_mesh_extrude.h
 include/code_saturne/cs_mesh_from_builder.h
 include/code_saturne/cs_mesh_group.h
 include/code_saturne/cs_mesh_halo.h
+include/code_saturne/cs_mesh_headers.h
 include/code_saturne/cs_mesh_location.h
 include/code_saturne/cs_mesh_quality.h
 include/code_saturne/cs_mesh_quantities.h
@@ -216,6 +239,7 @@ include/code_saturne/cs_multigrid.h
 include/code_saturne/cs_navsto_coupling.h
 include/code_saturne/cs_navsto_param.h
 include/code_saturne/cs_navsto_system.h
+include/code_saturne/cs_notebook.h
 include/code_saturne/cs_numbering.h
 include/code_saturne/cs_nz_condensation.mod
 include/code_saturne/cs_nz_tagmr.mod
@@ -234,12 +258,14 @@ include/code_saturne/cs_physical_properties.h
 include/code_saturne/cs_post.h
 include/code_saturne/cs_post_default.h
 include/code_saturne/cs_post_util.h
+include/code_saturne/cs_pprt_headers.h
 include/code_saturne/cs_preprocess.h
 include/code_saturne/cs_preprocessor_data.h
 include/code_saturne/cs_probe.h
 include/code_saturne/cs_property.h
 include/code_saturne/cs_prototypes.h
 include/code_saturne/cs_quadrature.h
+include/code_saturne/cs_rad_headers.h
 include/code_saturne/cs_rad_transfer.h
 include/code_saturne/cs_rad_transfer_absorption.h
 include/code_saturne/cs_rad_transfer_adf_models.h
@@ -262,13 +288,13 @@ include/code_saturne/cs_renumber.h
 include/code_saturne/cs_resource.h
 include/code_saturne/cs_restart.h
 include/code_saturne/cs_restart_default.h
+include/code_saturne/cs_restart_map.h
 include/code_saturne/cs_rotation.h
 include/code_saturne/cs_sat_coupling.h
 include/code_saturne/cs_scheme_geometry.h
 include/code_saturne/cs_sdm.h
 include/code_saturne/cs_search.h
 include/code_saturne/cs_selector.h
-include/code_saturne/cs_sla.h
 include/code_saturne/cs_sles.h
 include/code_saturne/cs_sles_default.h
 include/code_saturne/cs_sles_it.h
@@ -294,6 +320,7 @@ include/code_saturne/cs_tree_xml.h
 include/code_saturne/cs_turbomachinery.h
 include/code_saturne/cs_turbulence_bc.h
 include/code_saturne/cs_turbulence_model.h
+include/code_saturne/cs_vof.h
 include/code_saturne/cs_volume_zone.h
 include/code_saturne/cs_wall_functions.h
 include/code_saturne/cs_walldistance.h
@@ -311,6 +338,7 @@ include/code_saturne/field.mod
 include/code_saturne/field_operator.mod
 include/code_saturne/fvm_defs.h
 include/code_saturne/fvm_group.h
+include/code_saturne/fvm_headers.h
 include/code_saturne/fvm_io_num.h
 include/code_saturne/fvm_neighborhood.h
 include/code_saturne/fvm_nodal.h
@@ -357,36 +385,30 @@ include/ple_config.h
 include/ple_coupling.h
 include/ple_defs.h
 include/ple_locator.h
+lib/libcs_solver-6.0.so
 lib/libcs_solver.so
-lib/libcs_solver.so.5
-lib/libcs_solver.so.5.0.3
 lib/libple.so
 lib/libple.so.2
 lib/libple.so.2.0.0
+lib/libsaturne-6.0.so
 lib/libsaturne.so
-lib/libsaturne.so.5
-lib/libsaturne.so.5.0.3
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/BrowserForm.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/BrowserView.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/CommandMgrDialogForm.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/CommandMgrDialogView.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/CommandMgrLinesDisplayedDialogForm.py
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/Common.py
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/IdForm.py
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/IdView.py
+%%PYTHON_SITELIBDIR%%/code_saturne/Base/CompletionTextEditor.py
+%%PYTHON_SITELIBDIR%%/code_saturne/Base/MONO-bulle-HD.png
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/MainForm.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/MainView.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/NewCaseDialogForm.py
+%%PYTHON_SITELIBDIR%%/code_saturne/Base/QFileEditor.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/QtCase.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/QtCore.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/QtGui.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/QtPage.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/QtWidgets.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/Toolbox.py
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/XMLengine.py
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/XMLinitialize.py
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/XMLmodel.py
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/XMLvariables.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__init__.py
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/BrowserForm.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/BrowserForm.cpython-%%PYTHON_SUFFIX%%.pyc
@@ -398,18 +420,16 @@ lib/libsaturne.so.5.0.3
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/CommandMgrDialogView.cpython-%%PYTHON_SUFFIX%%.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/CommandMgrLinesDisplayedDialogForm.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/CommandMgrLinesDisplayedDialogForm.cpython-%%PYTHON_SUFFIX%%.pyc
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/Common.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/Common.cpython-%%PYTHON_SUFFIX%%.pyc
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/IdForm.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/IdForm.cpython-%%PYTHON_SUFFIX%%.pyc
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/IdView.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/IdView.cpython-%%PYTHON_SUFFIX%%.pyc
+%%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/CompletionTextEditor.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
+%%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/CompletionTextEditor.cpython-%%PYTHON_SUFFIX%%.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/MainForm.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/MainForm.cpython-%%PYTHON_SUFFIX%%.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/MainView.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/MainView.cpython-%%PYTHON_SUFFIX%%.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/NewCaseDialogForm.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/NewCaseDialogForm.cpython-%%PYTHON_SUFFIX%%.pyc
+%%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/QFileEditor.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
+%%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/QFileEditor.cpython-%%PYTHON_SUFFIX%%.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/QtCase.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/QtCase.cpython-%%PYTHON_SUFFIX%%.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/QtCore.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
@@ -422,37 +442,25 @@ lib/libsaturne.so.5.0.3
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/QtWidgets.cpython-%%PYTHON_SUFFIX%%.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/Toolbox.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
 %%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/Toolbox.cpython-%%PYTHON_SUFFIX%%.pyc
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/XMLengine.cpython-%%PYTHON_SUFFIX%%.opt-1.pyc
-%%PYTHON_SITELIBDIR%%/code_saturne/Base/__pycache__/XMLengine.cpython-%%PYTHON_SUFFIX%%.pyc
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+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/2-full_domain/case3/cs_user_extra_operations.c
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/2-full_domain/case3/cs_user_parameters.c
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/2-full_domain/case3/setup.xml
 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/2-full_domain/mesh/downcomer.des
 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/2-full_domain/mesh/fdc.des
 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/2-full_domain/mesh/pic.des
-%%PORTEXAMPLES%%%%EXAMPLESDIR%%/3-stratified_junction/case1/case1.xml
 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/3-stratified_junction/case1/cs_user_postprocess.c
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/3-stratified_junction/case1/setup.xml
 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/3-stratified_junction/mesh/sn_total.des
 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/4-2Ddisks/case1/coupling_parameters.py
 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/4-2Ddisks/case1/fluid/fluid-3rond2D-coupling.xml