3 files changed, 129 insertions, 0 deletions

diff --git a/science/orthanc/files/orthanc.in b/science/orthanc/files/orthanc.in
new file mode 100644
index 000000000000..85d6af45d8a1
--- /dev/null
+++ b/science/orthanc/files/orthanc.in
@@ -0,0 +1,40 @@
+#!/bin/sh
+
+# $FreeBSD$
+#
+# PROVIDE: orthanc
+# REQUIRE: LOGIN
+# KEYWORD: shutdown
+#
+# Add these lines to /etc/rc.conf.local or /etc/rc.conf
+# to enable this service:
+#
+# orthanc_enable (bool):	Set to NO by default.
+#				Set it to YES to enable Orthanc.
+# orthanc_flags (str):		Set to %%ETCDIR%%/orthanc.json
+#				by default.
+
+. /etc/rc.subr
+
+name=orthanc
+rcvar=orthanc_enable
+desc="Lightweight DICOM server for healthcare and medical research"
+
+load_rc_config $name
+
+: ${orthanc_enable:=NO}
+: ${orthanc_flags="%%ETCDIR%%/orthanc.json"}
+
+start_precmd=orthanc_prestart
+pidfile=/var/run/orthanc.pid
+procname=%%PREFIX%%/sbin/Orthanc
+command=/usr/sbin/daemon
+command_args=" -f -p ${pidfile} -u orthanc ${procname} ${orthanc_flags}"
+
+orthanc_prestart()
+{
+	# Have to empty rc_flags so they don't get passed to daemon(8)
+	rc_flags=""
+}
+
+run_rc_command "$1"
diff --git a/science/orthanc/files/patch-OrthancFramework_Resources_CMake_CivetwebConfiguration.cmake b/science/orthanc/files/patch-OrthancFramework_Resources_CMake_CivetwebConfiguration.cmake
new file mode 100644
index 000000000000..b1cd8bd06165
--- /dev/null
+++ b/science/orthanc/files/patch-OrthancFramework_Resources_CMake_CivetwebConfiguration.cmake
@@ -0,0 +1,64 @@
+--- OrthancFramework/Resources/CMake/CivetwebConfiguration.cmake.orig	2021-05-12 13:54:35 UTC
++++ OrthancFramework/Resources/CMake/CivetwebConfiguration.cmake
+@@ -98,32 +98,38 @@ else()
+ 
+   cmake_reset_check_state()
+   set(CMAKE_REQUIRED_LIBRARIES dl pthread)
+-  CHECK_LIBRARY_EXISTS(civetweb mg_start "" HAVE_CIVETWEB_LIB)
+-  if (NOT HAVE_CIVETWEB_LIB)
+-    message(FATAL_ERROR "Please install the libcivetweb-dev package")
+-  endif()
+ 
+-  link_libraries(civetweb)
++  find_library(CIVETWEB_LIB NAMES civetweb PATHS
++    /usr/lib
++    /usr/local/lib
++  )
+ 
+-  # Check whether the system distribution of civetweb contains the
+-  # patch "../Patches/civetweb-1.13.patch" that allows to disable
+-  # keep-alive on selected HTTP connections. This is useful to speed
+-  # up multipart transfers, as encountered in DICOMweb.
+-  CHECK_LIBRARY_EXISTS(civetweb mg_disable_keep_alive "" CIVETWEB_HAS_DISABLE_KEEP_ALIVE_1)  # From "../Patches/civetweb-1.13.patch"
+-  CHECK_LIBRARY_EXISTS(civetweb mg_disable_connection_keep_alive "" CIVETWEB_HAS_DISABLE_KEEP_ALIVE_2)  # From civetweb >= 1.14
+-  if (CIVETWEB_HAS_DISABLE_KEEP_ALIVE_1 OR
+-      CIVETWEB_HAS_DISABLE_KEEP_ALIVE_2)
+-    add_definitions(
+-      -DCIVETWEB_HAS_DISABLE_KEEP_ALIVE=1
+-      -DCIVETWEB_HAS_WEBDAV_WRITING=1
+-      )
+-    message("Performance: Your system-wide distribution of civetweb is configured for best performance")
++  if (CIVETWEB_LIB)
++    CHECK_LIBRARY_EXISTS(${CIVETWEB_LIB} mg_start "" HAVE_CIVETWEB_LIB)
++    if (NOT HAVE_CIVETWEB_LIB)
++      message(FATAL_ERROR "Unable to use mg_start from civetweb library")
++    endif()
++
++    CHECK_LIBRARY_EXISTS(${CIVETWEB_LIB} mg_disable_keep_alive "" CIVETWEB_HAS_DISABLE_KEEP_ALIVE)
++    if (CIVETWEB_HAS_DISABLE_KEEP_ALIVE)
++      add_definitions(
++        -DCIVETWEB_HAS_DISABLE_KEEP_ALIVE=1
++        -DCIVETWEB_HAS_WEBDAV_WRITING=1
++        )
++      message("Performance: Your system-wide distribution of civetweb is configured for best performance")
++    else()
++      message(WARNING "Performance: Your system-wide distribution of civetweb does not feature the mg_disable_keep_alive() function, and WebDAV will only be available for read-only access")
++      add_definitions(
++        -DCIVETWEB_HAS_DISABLE_KEEP_ALIVE=0
++        -DCIVETWEB_HAS_WEBDAV_WRITING=0
++        )
++    endif()
++
++    get_filename_component(CIVETWEB_LIB_PATH ${CIVETWEB_LIB} DIRECTORY)
++    link_directories(${CIVETWEB_LIB_PATH})
++    link_libraries(civetweb)
+   else()
+-    message(WARNING "Performance: Your system-wide distribution of civetweb does not feature the mg_disable_keep_alive() function, and WebDAV will only be available for read-only access")
+-    add_definitions(
+-      -DCIVETWEB_HAS_DISABLE_KEEP_ALIVE=0
+-      -DCIVETWEB_HAS_WEBDAV_WRITING=0
+-      )
++    message(FATAL_ERROR "Unable to find the civetweb library")
+   endif()
+ 
+   unset(CMAKE_REQUIRED_LIBRARIES)  # This reset must be after "CHECK_LIBRARY_EXISTS"
diff --git a/science/orthanc/files/patch-OrthancServer_Resources_Configuration.json b/science/orthanc/files/patch-OrthancServer_Resources_Configuration.json
new file mode 100644
index 000000000000..91f978822db2
--- /dev/null
+++ b/science/orthanc/files/patch-OrthancServer_Resources_Configuration.json
@@ -0,0 +1,25 @@
+--- OrthancServer/Resources/Configuration.json.orig	2021-01-29 09:36:16 UTC
++++ OrthancServer/Resources/Configuration.json
+@@ -10,12 +10,12 @@
+   // Path to the directory that holds the heavyweight files (i.e. the
+   // raw DICOM instances). Backslashes must be either escaped by
+   // doubling them, or replaced by forward slashes "/".
+-  "StorageDirectory" : "OrthancStorage",
++  "StorageDirectory" : "/var/db/orthanc/db-v5",
+ 
+   // Path to the directory that holds the SQLite index (if unset, the
+   // value of StorageDirectory is used). This index could be stored on
+   // a RAM-drive or a SSD device for performance reasons.
+-  "IndexDirectory" : "OrthancStorage",
++  "IndexDirectory" : "/var/db/orthanc/db-v5",
+ 
+   // Path to the directory where Orthanc stores its large temporary
+   // files. The content of this folder can be safely deleted once
+@@ -53,6 +53,7 @@
+   // find shared libraries. Backslashes must be either escaped by
+   // doubling them, or replaced by forward slashes "/".
+   "Plugins" : [
++    "%%PREFIX%%/share/orthanc/plugins/"
+   ],
+ 
+   // Maximum number of processing jobs that are simultaneously running