4 files changed, 166 insertions, 0 deletions

diff --git a/science/py-mdp/Makefile b/science/py-mdp/Makefile
new file mode 100644
index 000000000000..818d026aa140
--- /dev/null
+++ b/science/py-mdp/Makefile
@@ -0,0 +1,27 @@
+# Ports collection makefile for:	mdp
+# Date created:				September 9, 2008
+# Whom:					Li-Lun Wang <llwang@infor.org>
+#
+# $FreeBSD$
+#
+
+PORTNAME=	mdp
+PORTVERSION=	2.3
+CATEGORIES=	science python
+MASTER_SITES=	${MASTER_SITE_SOURCEFORGE}
+MASTER_SITE_SUBDIR=	mdp-toolkit
+PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
+DISTNAME=	${PORTNAME:U}-${PORTVERSION}
+
+MAINTAINER=	llwang@infor.org
+COMMENT=	Modular toolkit for Data Processing
+
+RUN_DEPENDS=	${PYNUMPY} \
+		${PYTHON_SITELIBDIR}/scipy/__init__.py:${PORTSDIR}/science/py-scipy \
+		${PYTHON_SITELIBDIR}/symeig/__init__.py:${PORTSDIR}/math/py-symeig
+
+USE_PYTHON=	2.4+
+USE_PYDISTUTILS=	yes
+PYDISTUTILS_EGGINFO=	${PYDISTUTILS_PKGNAME:C/[^A-Za-z0-9.]+/_/g:U}-${PYDISTUTILS_PKGVERSION:C/[^A-Za-z0-9.]+/_/g}-${PYTHON_VERSION:S/thon//}.egg-info
+
+.include <bsd.port.mk>
diff --git a/science/py-mdp/distinfo b/science/py-mdp/distinfo
new file mode 100644
index 000000000000..b63ceaefe20e
--- /dev/null
+++ b/science/py-mdp/distinfo
@@ -0,0 +1,3 @@
+MD5 (MDP-2.3.tar.gz) = 63b66bc4b787aebe5291869f5286e4bf
+SHA256 (MDP-2.3.tar.gz) = e5e78670d211e1ca8ad48305fd17af141df60e830e3816a4fa00d4d5ce5318fa
+SIZE (MDP-2.3.tar.gz) = 133071
diff --git a/science/py-mdp/pkg-descr b/science/py-mdp/pkg-descr
new file mode 100644
index 000000000000..fc4b2bd6c4c7
--- /dev/null
+++ b/science/py-mdp/pkg-descr
@@ -0,0 +1,8 @@
+Modular toolkit for Data Processing (MDP) is a Python data processing
+framework. Implemented algorithms include: Principal Component
+Analysis (PCA), Independent Component Analysis (ICA), Slow Feature
+Analysis (SFA), Independent Slow Feature Analysis (ISFA), Growing Neural
+Gas (GNG), Factor Analysis, Fisher Discriminant Analysis (FDA), Gaussian
+Classifiers, and Restricted Boltzmann Machines.
+
+WWW: http://mdp-toolkit.sourceforge.net/
diff --git a/science/py-mdp/pkg-plist b/science/py-mdp/pkg-plist
new file mode 100644
index 000000000000..3861e9120c9a
--- /dev/null
+++ b/science/py-mdp/pkg-plist
@@ -0,0 +1,128 @@
+%%PYTHON_SITELIBDIR%%/mdp/__init__.py
+%%PYTHON_SITELIBDIR%%/mdp/__init__.pyc
+%%PYTHON_SITELIBDIR%%/mdp/__init__.pyo
+%%PYTHON_SITELIBDIR%%/mdp/contrib/__init__.py
+%%PYTHON_SITELIBDIR%%/mdp/contrib/__init__.pyc
+%%PYTHON_SITELIBDIR%%/mdp/contrib/__init__.pyo
+%%PYTHON_SITELIBDIR%%/mdp/contrib/jade.py
+%%PYTHON_SITELIBDIR%%/mdp/contrib/jade.pyc
+%%PYTHON_SITELIBDIR%%/mdp/contrib/jade.pyo
+%%PYTHON_SITELIBDIR%%/mdp/contrib/nipals.py
+%%PYTHON_SITELIBDIR%%/mdp/contrib/nipals.pyc
+%%PYTHON_SITELIBDIR%%/mdp/contrib/nipals.pyo
+%%PYTHON_SITELIBDIR%%/mdp/demo/__init__.py
+%%PYTHON_SITELIBDIR%%/mdp/demo/__init__.pyc
+%%PYTHON_SITELIBDIR%%/mdp/demo/__init__.pyo
+%%PYTHON_SITELIBDIR%%/mdp/demo/demo.py
+%%PYTHON_SITELIBDIR%%/mdp/demo/demo.pyc
+%%PYTHON_SITELIBDIR%%/mdp/demo/demo.pyo
+%%PYTHON_SITELIBDIR%%/mdp/graph/__init__.py
+%%PYTHON_SITELIBDIR%%/mdp/graph/__init__.pyc
+%%PYTHON_SITELIBDIR%%/mdp/graph/__init__.pyo
+%%PYTHON_SITELIBDIR%%/mdp/graph/graph.py
+%%PYTHON_SITELIBDIR%%/mdp/graph/graph.pyc
+%%PYTHON_SITELIBDIR%%/mdp/graph/graph.pyo
+%%PYTHON_SITELIBDIR%%/mdp/helper_funcs.py
+%%PYTHON_SITELIBDIR%%/mdp/helper_funcs.pyc
+%%PYTHON_SITELIBDIR%%/mdp/helper_funcs.pyo
+%%PYTHON_SITELIBDIR%%/mdp/hinet/__init__.py
+%%PYTHON_SITELIBDIR%%/mdp/hinet/__init__.pyc
+%%PYTHON_SITELIBDIR%%/mdp/hinet/__init__.pyo
+%%PYTHON_SITELIBDIR%%/mdp/hinet/hinet.py
+%%PYTHON_SITELIBDIR%%/mdp/hinet/hinet.pyc
+%%PYTHON_SITELIBDIR%%/mdp/hinet/hinet.pyo
+%%PYTHON_SITELIBDIR%%/mdp/hinet/hinet_html.py
+%%PYTHON_SITELIBDIR%%/mdp/hinet/hinet_html.pyc
+%%PYTHON_SITELIBDIR%%/mdp/hinet/hinet_html.pyo
+%%PYTHON_SITELIBDIR%%/mdp/linear_flows.py
+%%PYTHON_SITELIBDIR%%/mdp/linear_flows.pyc
+%%PYTHON_SITELIBDIR%%/mdp/linear_flows.pyo
+%%PYTHON_SITELIBDIR%%/mdp/nodes/__init__.py
+%%PYTHON_SITELIBDIR%%/mdp/nodes/__init__.pyc
+%%PYTHON_SITELIBDIR%%/mdp/nodes/__init__.pyo
+%%PYTHON_SITELIBDIR%%/mdp/nodes/em_nodes.py
+%%PYTHON_SITELIBDIR%%/mdp/nodes/em_nodes.pyc
+%%PYTHON_SITELIBDIR%%/mdp/nodes/em_nodes.pyo
+%%PYTHON_SITELIBDIR%%/mdp/nodes/expansion_nodes.py
+%%PYTHON_SITELIBDIR%%/mdp/nodes/expansion_nodes.pyc
+%%PYTHON_SITELIBDIR%%/mdp/nodes/expansion_nodes.pyo
+%%PYTHON_SITELIBDIR%%/mdp/nodes/fda_nodes.py
+%%PYTHON_SITELIBDIR%%/mdp/nodes/fda_nodes.pyc
+%%PYTHON_SITELIBDIR%%/mdp/nodes/fda_nodes.pyo
+%%PYTHON_SITELIBDIR%%/mdp/nodes/ica_nodes.py
+%%PYTHON_SITELIBDIR%%/mdp/nodes/ica_nodes.pyc
+%%PYTHON_SITELIBDIR%%/mdp/nodes/ica_nodes.pyo
+%%PYTHON_SITELIBDIR%%/mdp/nodes/isfa_nodes.py
+%%PYTHON_SITELIBDIR%%/mdp/nodes/isfa_nodes.pyc
+%%PYTHON_SITELIBDIR%%/mdp/nodes/isfa_nodes.pyo
+%%PYTHON_SITELIBDIR%%/mdp/nodes/misc_nodes.py
+%%PYTHON_SITELIBDIR%%/mdp/nodes/misc_nodes.pyc
+%%PYTHON_SITELIBDIR%%/mdp/nodes/misc_nodes.pyo
+%%PYTHON_SITELIBDIR%%/mdp/nodes/neural_gas_nodes.py
+%%PYTHON_SITELIBDIR%%/mdp/nodes/neural_gas_nodes.pyc
+%%PYTHON_SITELIBDIR%%/mdp/nodes/neural_gas_nodes.pyo
+%%PYTHON_SITELIBDIR%%/mdp/nodes/pca_nodes.py
+%%PYTHON_SITELIBDIR%%/mdp/nodes/pca_nodes.pyc
+%%PYTHON_SITELIBDIR%%/mdp/nodes/pca_nodes.pyo
+%%PYTHON_SITELIBDIR%%/mdp/nodes/rbm_nodes.py
+%%PYTHON_SITELIBDIR%%/mdp/nodes/rbm_nodes.pyc
+%%PYTHON_SITELIBDIR%%/mdp/nodes/rbm_nodes.pyo
+%%PYTHON_SITELIBDIR%%/mdp/nodes/sfa_nodes.py
+%%PYTHON_SITELIBDIR%%/mdp/nodes/sfa_nodes.pyc
+%%PYTHON_SITELIBDIR%%/mdp/nodes/sfa_nodes.pyo
+%%PYTHON_SITELIBDIR%%/mdp/signal_node.py
+%%PYTHON_SITELIBDIR%%/mdp/signal_node.pyc
+%%PYTHON_SITELIBDIR%%/mdp/signal_node.pyo
+%%PYTHON_SITELIBDIR%%/mdp/test/__init__.py
+%%PYTHON_SITELIBDIR%%/mdp/test/__init__.pyc
+%%PYTHON_SITELIBDIR%%/mdp/test/__init__.pyo
+%%PYTHON_SITELIBDIR%%/mdp/test/benchmark_mdp.py
+%%PYTHON_SITELIBDIR%%/mdp/test/benchmark_mdp.pyc
+%%PYTHON_SITELIBDIR%%/mdp/test/benchmark_mdp.pyo
+%%PYTHON_SITELIBDIR%%/mdp/test/test_contrib.py
+%%PYTHON_SITELIBDIR%%/mdp/test/test_contrib.pyc
+%%PYTHON_SITELIBDIR%%/mdp/test/test_contrib.pyo
+%%PYTHON_SITELIBDIR%%/mdp/test/test_flows.py
+%%PYTHON_SITELIBDIR%%/mdp/test/test_flows.pyc
+%%PYTHON_SITELIBDIR%%/mdp/test/test_flows.pyo
+%%PYTHON_SITELIBDIR%%/mdp/test/test_graph.py
+%%PYTHON_SITELIBDIR%%/mdp/test/test_graph.pyc
+%%PYTHON_SITELIBDIR%%/mdp/test/test_graph.pyo
+%%PYTHON_SITELIBDIR%%/mdp/test/test_hinet.py
+%%PYTHON_SITELIBDIR%%/mdp/test/test_hinet.pyc
+%%PYTHON_SITELIBDIR%%/mdp/test/test_hinet.pyo
+%%PYTHON_SITELIBDIR%%/mdp/test/test_nodes.py
+%%PYTHON_SITELIBDIR%%/mdp/test/test_nodes.pyc
+%%PYTHON_SITELIBDIR%%/mdp/test/test_nodes.pyo
+%%PYTHON_SITELIBDIR%%/mdp/test/test_utils.py
+%%PYTHON_SITELIBDIR%%/mdp/test/test_utils.pyc
+%%PYTHON_SITELIBDIR%%/mdp/test/test_utils.pyo
+%%PYTHON_SITELIBDIR%%/mdp/test/testing_tools.py
+%%PYTHON_SITELIBDIR%%/mdp/test/testing_tools.pyc
+%%PYTHON_SITELIBDIR%%/mdp/test/testing_tools.pyo
+%%PYTHON_SITELIBDIR%%/mdp/utils/__init__.py
+%%PYTHON_SITELIBDIR%%/mdp/utils/__init__.pyc
+%%PYTHON_SITELIBDIR%%/mdp/utils/__init__.pyo
+%%PYTHON_SITELIBDIR%%/mdp/utils/covariance.py
+%%PYTHON_SITELIBDIR%%/mdp/utils/covariance.pyc
+%%PYTHON_SITELIBDIR%%/mdp/utils/covariance.pyo
+%%PYTHON_SITELIBDIR%%/mdp/utils/introspection.py
+%%PYTHON_SITELIBDIR%%/mdp/utils/introspection.pyc
+%%PYTHON_SITELIBDIR%%/mdp/utils/introspection.pyo
+%%PYTHON_SITELIBDIR%%/mdp/utils/progress_bar.py
+%%PYTHON_SITELIBDIR%%/mdp/utils/progress_bar.pyc
+%%PYTHON_SITELIBDIR%%/mdp/utils/progress_bar.pyo
+%%PYTHON_SITELIBDIR%%/mdp/utils/quad_forms.py
+%%PYTHON_SITELIBDIR%%/mdp/utils/quad_forms.pyc
+%%PYTHON_SITELIBDIR%%/mdp/utils/quad_forms.pyo
+%%PYTHON_SITELIBDIR%%/mdp/utils/routines.py
+%%PYTHON_SITELIBDIR%%/mdp/utils/routines.pyc
+%%PYTHON_SITELIBDIR%%/mdp/utils/routines.pyo
+@dirrm %%PYTHON_SITELIBDIR%%/mdp/utils
+@dirrm %%PYTHON_SITELIBDIR%%/mdp/test
+@dirrm %%PYTHON_SITELIBDIR%%/mdp/nodes
+@dirrm %%PYTHON_SITELIBDIR%%/mdp/hinet
+@dirrm %%PYTHON_SITELIBDIR%%/mdp/graph
+@dirrm %%PYTHON_SITELIBDIR%%/mdp/demo
+@dirrm %%PYTHON_SITELIBDIR%%/mdp/contrib
+@dirrm %%PYTHON_SITELIBDIR%%/mdp