1 files changed, 65 insertions, 0 deletions

diff --git a/science/py-tensorflow/files/patch-tensorflow_tensorflow.bzl b/science/py-tensorflow/files/patch-tensorflow_tensorflow.bzl
new file mode 100644
index 000000000000..9eb43a60af6b
--- /dev/null
+++ b/science/py-tensorflow/files/patch-tensorflow_tensorflow.bzl
@@ -0,0 +1,65 @@
+--- tensorflow/tensorflow.bzl.orig	2019-06-18 23:48:23.000000000 +0100
++++ tensorflow/tensorflow.bzl	2019-07-13 13:57:17.579194000 +0100
+@@ -287,6 +287,7 @@
+             "-Wno-sign-compare",
+             "-fno-exceptions",
+             "-ftemplate-depth=900",
++	    "-I%%LOCALBASE%%/include",
+         ]) +
+         if_cuda(["-DGOOGLE_CUDA=1"]) +
+         if_tensorrt(["-DGOOGLE_TENSORRT=1"]) +
+@@ -603,7 +604,7 @@
+                 ],
+             ),
+             data = depset(data + added_data_deps),
+-            linkopts = linkopts + _rpath_linkopts(name_os),
++	    linkopts = linkopts + ["-lexecinfo", "-lgpr"] + _rpath_linkopts(name),
+             visibility = visibility,
+             **kwargs
+         )
+@@ -657,7 +658,7 @@
+     tf_cc_binary(
+         name = tool,
+         copts = tf_copts(),
+-        linkopts = if_not_windows(["-lm", "-Wl,-ldl"]),
++        linkopts = if_not_windows(["-lm", "-Wl, -lexecinfo"]),
+         linkstatic = 1,  # Faster to link this one-time-use binary dynamically
+         deps = [op_gen] + deps,
+     )
+@@ -839,7 +840,7 @@
+     tf_cc_binary(
+         name = tool_name,
+         copts = tf_copts(),
+-        linkopts = if_not_windows(["-lm", "-Wl,-ldl"]) + cc_linkopts,
++        linkopts = if_not_windows(["-L%%LOCALBASE%%/lib", "-lm", "-Wl, -lexecinfo"]) + cc_linkopts,
+         linkstatic = 1,  # Faster to link this one-time-use binary dynamically
+         visibility = [clean_dep("//tensorflow:internal")],
+         deps = ([
+@@ -954,8 +955,9 @@
+             "//conditions:default": [
+                 "-lpthread",
+                 "-lm",
++		"-lexecinfo",
+             ],
+-        }) + linkopts + _rpath_linkopts(name),
++        }) + linkopts + ["-lexecinfo"] + _rpath_linkopts(name),
+         deps = deps + tf_binary_dynamic_kernel_deps(kernels) + if_mkl_ml(
+             [
+                 clean_dep("//third_party/mkl:intel_binary_blob"),
+@@ -1103,7 +1105,7 @@
+         ]) + if_rocm_is_configured([
+             clean_dep("//tensorflow/core:gpu_lib"),
+         ]),
+-        linkopts = if_not_windows(["-lpthread", "-lm"]) + linkopts + _rpath_linkopts(name),
++        linkopts = if_not_windows(["-lpthread", "-lm", "-lexecinfo",]) + linkopts + _rpath_linkopts(name),
+         linkstatic = linkstatic or select({
+             # cc_tests with ".so"s in srcs incorrectly link on Darwin
+             # unless linkstatic=1.
+@@ -1784,6 +1786,7 @@
+         linkopts = linkopts + select({
+             "//conditions:default": [
+                 "-lm",
++		"-lexecinfo",
+             ],
+             clean_dep("//tensorflow:windows"): [],
+             clean_dep("//tensorflow:macos"): [],