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authorYuri Victorovich <yuri@FreeBSD.org>2022-04-14 16:26:53 +0000
committerYuri Victorovich <yuri@FreeBSD.org>2022-04-14 17:08:20 +0000
commit141e15dbe548b454165b617856aeda003c41eddf (patch)
tree534a178f44addcc3b490ce894c1a8db0af7aa9d6 /science/tinker
parenteebcc07efc96e859900209a9c8f9cf9e5aea4767 (diff)
downloadports-141e15dbe548b454165b617856aeda003c41eddf.tar.gz
ports-141e15dbe548b454165b617856aeda003c41eddf.zip
Diffstat (limited to 'science/tinker')
-rw-r--r--science/tinker/Makefile4
-rw-r--r--science/tinker/distinfo6
-rw-r--r--science/tinker/files/patch-make_Makefile14
-rw-r--r--science/tinker/pkg-plist6
4 files changed, 9 insertions, 21 deletions
diff --git a/science/tinker/Makefile b/science/tinker/Makefile
index c4d0cbbccfd8..9f8fd995244e 100644
--- a/science/tinker/Makefile
+++ b/science/tinker/Makefile
@@ -1,7 +1,7 @@
# Created by: Glenn Johnson
PORTNAME= tinker
-DISTVERSION= 8.10.1
+DISTVERSION= 8.10.2
CATEGORIES= science
MASTER_SITES= https://dasher.wustl.edu/tinker/downloads/
@@ -56,6 +56,8 @@ FFLAGS+= -mfancy-math-387 -malign-double
post-extract:
@${RM} ${BUILD_WRKSRC}/*.c
@${RM} ${WRKSRC}/other/eopbend.orig
+ # remove bundled linux libraries
+ @${RM} ${WRKSRC}/lib/linux/*
post-patch:
@${REINPLACE_CMD} -i '' 's|\.\./bin/|${STAGEDIR}${PREFIX}/bin/|' ${BUILD_WRKSRC}/../bench/bench*.run
diff --git a/science/tinker/distinfo b/science/tinker/distinfo
index 20d4da117165..a4b276b6d825 100644
--- a/science/tinker/distinfo
+++ b/science/tinker/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1633966955
-SHA256 (tinker-8.10.1.tar.gz) = 4687d60cc44c83462a15639920c4a7fe551aec6b41f295c93962d83bf4ef4f2b
-SIZE (tinker-8.10.1.tar.gz) = 65197637
+TIMESTAMP = 1649951980
+SHA256 (tinker-8.10.2.tar.gz) = 7481769f3d61f81ab98e6a0950520693a6d078c4048998f388efb72c20adde40
+SIZE (tinker-8.10.2.tar.gz) = 72009856
diff --git a/science/tinker/files/patch-make_Makefile b/science/tinker/files/patch-make_Makefile
index e0aa7a7b9650..6d1bf05440b7 100644
--- a/science/tinker/files/patch-make_Makefile
+++ b/science/tinker/files/patch-make_Makefile
@@ -1,17 +1,5 @@
---- make/Makefile.orig 2021-09-29 02:42:24 UTC
+--- make/Makefile.orig 2022-01-13 23:40:10 UTC
+++ make/Makefile
-@@ -87,9 +87,9 @@ APBS_LIBS = -lapbsmainroutines -lapbs -lmaloc -lapbsbl
- F77 = gfortran
- F77FLAGS = -c
- #OPTFLAGS = -Ofast -march=native -fopenmp
--OPTFLAGS = -Ofast -mssse3 -fopenmp
-+OPTFLAGS = -Ofast $(PORT_SIMD_FLAGS) -fopenmp
- #OPTFLAGS = -Og -fbacktrace -fcheck=bounds -Wunused -Wmaybe-uninitialized
--LIBDIR = -L. -L$(TINKER_LIBDIR)/macos
-+#LIBDIR = -L. -L$(TINKER_LIBDIR)/macos
- LIBS =
- LIBFLAGS = -crusv
- RANLIB = ranlib -c
@@ -803,136 +803,136 @@ listing:
cat *.f *.c > tinker.txt
diff --git a/science/tinker/pkg-plist b/science/tinker/pkg-plist
index a38ac3839d4f..cb3939f54c62 100644
--- a/science/tinker/pkg-plist
+++ b/science/tinker/pkg-plist
@@ -63,7 +63,6 @@ bin/xyzint
bin/xyzmol2
bin/xyzpdb
%%DATADIR%%/params/0README
-%%DATADIR%%/params/amber14sb.prm
%%DATADIR%%/params/amber94.prm
%%DATADIR%%/params/amber96.prm
%%DATADIR%%/params/amber98.prm
@@ -82,7 +81,6 @@ bin/xyzpdb
%%DATADIR%%/params/charmm22.prm
%%DATADIR%%/params/charmm22cmap.prm
%%DATADIR%%/params/dang.prm
-%%DATADIR%%/params/hippo19.prm
%%DATADIR%%/params/hoch.prm
%%DATADIR%%/params/iwater.prm
%%DATADIR%%/params/mm2.prm
@@ -91,7 +89,6 @@ bin/xyzpdb
%%DATADIR%%/params/mmff.prm
%%DATADIR%%/params/oplsaa.prm
%%DATADIR%%/params/oplsaal.prm
-%%DATADIR%%/params/oplsaam.prm
%%DATADIR%%/params/oplsua.prm
%%DATADIR%%/params/smoothaa.prm
%%DATADIR%%/params/smoothua.prm
@@ -201,7 +198,8 @@ bin/xyzpdb
%%DATADIR%%/test/salt.key
%%DATADIR%%/test/salt.log
%%DATADIR%%/test/salt.run
-%%DATADIR%%/test/water.key
+%%DATADIR%%/test/water.amoeba
+%%DATADIR%%/test/water.hippo
%%DATADIR%%/test/water.log
%%DATADIR%%/test/water.pot
%%DATADIR%%/test/water.run