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authorYuri Victorovich <yuri@FreeBSD.org>2019-07-14 00:34:53 +0000
committerYuri Victorovich <yuri@FreeBSD.org>2019-07-14 00:34:53 +0000
commit98ca4ad5a5b3a22b516d367d0b8a71f39daf50f0 (patch)
treebfc8294f202a902eddf600556bad86597397f65e /science/tinker
parent1db32cf03f7ed4372c2e1b47ec65933d8cb4b12c (diff)
downloadports-98ca4ad5a5b3a22b516d367d0b8a71f39daf50f0.tar.gz
ports-98ca4ad5a5b3a22b516d367d0b8a71f39daf50f0.zip
science/tinker: Update 8.6.1 -> 8.7.1
Reported by: portscout
Notes
Notes: svn path=/head/; revision=506582
Diffstat (limited to 'science/tinker')
-rw-r--r--science/tinker/Makefile3
-rw-r--r--science/tinker/distinfo6
-rw-r--r--science/tinker/files/patch-make_Makefile11
-rw-r--r--science/tinker/pkg-plist6
4 files changed, 15 insertions, 11 deletions
diff --git a/science/tinker/Makefile b/science/tinker/Makefile
index f833020b24d8..43f2b8536be9 100644
--- a/science/tinker/Makefile
+++ b/science/tinker/Makefile
@@ -2,8 +2,7 @@
# $FreeBSD$
PORTNAME= tinker
-DISTVERSION= 8.6.1
-PORTREVISION= 1
+DISTVERSION= 8.7.1
CATEGORIES= science
MASTER_SITES= https://dasher.wustl.edu/tinker/downloads/
diff --git a/science/tinker/distinfo b/science/tinker/distinfo
index c4d4c580fbb9..907211d56e30 100644
--- a/science/tinker/distinfo
+++ b/science/tinker/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1552750221
-SHA256 (tinker-8.6.1.tar.gz) = 395556fd1a4c4907ab3f3207487db536693df883db71986a896ba1415f15fb6b
-SIZE (tinker-8.6.1.tar.gz) = 41769000
+TIMESTAMP = 1562919582
+SHA256 (tinker-8.7.1.tar.gz) = 0d6eff8bbc9be0b37d62b6fd3da35bb5499958eafe67aa9c014c4648c8b46d0f
+SIZE (tinker-8.7.1.tar.gz) = 56919176
diff --git a/science/tinker/files/patch-make_Makefile b/science/tinker/files/patch-make_Makefile
index c39aa9924608..856afea4dfcd 100644
--- a/science/tinker/files/patch-make_Makefile
+++ b/science/tinker/files/patch-make_Makefile
@@ -1,15 +1,18 @@
---- make/Makefile.orig 2019-01-16 04:21:45 UTC
+--- make/Makefile.orig 2019-07-11 19:35:55 UTC
+++ make/Makefile
-@@ -84,7 +84,7 @@ APBS_LIBS = -lapbsmainroutines -lapbs -l
+@@ -84,9 +84,9 @@ APBS_LIBS = -lapbsmainroutines -lapbs -lmaloc -lapbsbl
F77 = gfortran
F77FLAGS = -c
-OPTFLAGS = -Ofast -mssse3 -fopenmp
+OPTFLAGS = -Ofast $(PORT_SIMD_FLAGS) -fopenmp
#OPTFLAGS = -Og -fbacktrace -fcheck=bounds -Wunused -Wmaybe-uninitialized
- LIBDIR = -L. -L$(TINKER_LIBDIR)/macos
+-LIBDIR = -L. -L$(TINKER_LIBDIR)/macos
++#LIBDIR = -L. -L$(TINKER_LIBDIR)/macos
LIBS =
-@@ -787,132 +787,132 @@ listing:
+ LIBFLAGS = -crusv
+ RANLIB = ranlib -c
+@@ -802,132 +802,132 @@ listing:
cat *.f *.c > tinker.txt
rename_bin:
diff --git a/science/tinker/pkg-plist b/science/tinker/pkg-plist
index 8a2edbabf691..03d774a2ce83 100644
--- a/science/tinker/pkg-plist
+++ b/science/tinker/pkg-plist
@@ -71,13 +71,14 @@ bin/xyzpdb
%%DATADIR%%/params/amoebabio09.prm
%%DATADIR%%/params/amoebabio18.prm
%%DATADIR%%/params/amoebanuc17.prm
+%%DATADIR%%/params/amoebaplus.prm
%%DATADIR%%/params/amoebapro04.prm
%%DATADIR%%/params/amoebapro13.prm
%%DATADIR%%/params/charmm19.prm
%%DATADIR%%/params/charmm22.prm
%%DATADIR%%/params/charmm22cmap.prm
%%DATADIR%%/params/dang.prm
-%%DATADIR%%/params/hippo18.prm
+%%DATADIR%%/params/hippo19.prm
%%DATADIR%%/params/hoch.prm
%%DATADIR%%/params/iwater.prm
%%DATADIR%%/params/mm2.prm
@@ -92,6 +93,7 @@ bin/xyzpdb
%%DATADIR%%/params/tiny.prm
%%DATADIR%%/params/water03.prm
%%DATADIR%%/params/water14.prm
+%%DATADIR%%/params/water19.prm
%%DATADIR%%/test/0README
%%DATADIR%%/test/anion.dat
%%DATADIR%%/test/anion.dyn0
@@ -165,9 +167,9 @@ bin/xyzpdb
%%DATADIR%%/test/ice.xyz
%%DATADIR%%/test/ifabp.dat
%%DATADIR%%/test/ifabp.key
+%%DATADIR%%/test/ifabp.log
%%DATADIR%%/test/ifabp.run
%%DATADIR%%/test/ifabp.xyz
-%%DATADIR%%/test/ifapb.log
%%DATADIR%%/test/nitrogen.arc
%%DATADIR%%/test/nitrogen.key
%%DATADIR%%/test/nitrogen.log