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Diffstat (limited to 'biology/p5-Bio-MAGETAB/Makefile')
| -rw-r--r-- | biology/p5-Bio-MAGETAB/Makefile | 96 |
1 files changed, 96 insertions, 0 deletions
diff --git a/biology/p5-Bio-MAGETAB/Makefile b/biology/p5-Bio-MAGETAB/Makefile new file mode 100644 index 000000000000..e6ece989286a --- /dev/null +++ b/biology/p5-Bio-MAGETAB/Makefile @@ -0,0 +1,96 @@ +# New ports collection makefile for: p5-Bio-MAGETAB +# Date created: 23 June, 2009 +# Whom: Wen Heping <wenheping@gmail.com> +# +# $FreeBSD$ +# + +PORTNAME= Bio-MAGETAB +PORTVERSION= 0.98 +CATEGORIES= biology perl5 +MASTER_SITES= CPAN +PKGNAMEPREFIX= p5- + +MAINTAINER= wenheping@gmail.com +COMMENT= A data model and utility API for the MAGE-TAB format + +BUILD_DEPENDS= p5-Test-Exception>=0.26:${PORTSDIR}/devel/p5-Test-Exception \ + p5-DateTime-Format-DateManip>=0.04:${PORTSDIR}/devel/p5-DateTime-Format-DateManip \ + p5-Moose-Policy>=0.03:${PORTSDIR}/devel/p5-Moose-Policy \ + p5-MooseX-Types>=0.10:${PORTSDIR}/devel/p5-MooseX-Types \ + p5-Parse-RecDescent>=1.96:${PORTSDIR}/devel/p5-Parse-RecDescent \ + p5-Params-Coerce>=0.14:${PORTSDIR}/devel/p5-Params-Coerce \ + p5-URI>=1.35:${PORTSDIR}/net/p5-URI \ + p5-Test-Exception>=0.26:${PORTSDIR}/devel/p5-Test-Exception \ + p5-Date-Manip>=5.44:${PORTSDIR}/devel/p5-Date-Manip \ + p5-DateTime>=0.43:${PORTSDIR}/devel/p5-DateTime \ + p5-Text-CSV_XS>=0.32:${PORTSDIR}/textproc/p5-Text-CSV_XS \ + p5-Email-Valid>=0.179:${PORTSDIR}/mail/p5-Email-Valid \ + p5-Moose>=0.43:${PORTSDIR}/devel/p5-Moose +RUN_DEPENDS= ${BUILD_DEPENDS} + +PERL_CONFIGURE= YES + +MAN3= Bio::MAGETAB::Material.3 \ + Bio::MAGETAB::Types.3 \ + Bio::MAGETAB::ControlledTerm.3 \ + Bio::MAGETAB::Util::Reader::DataMatrix.3 \ + Bio::MAGETAB::DesignElement.3 \ + Bio::MAGETAB::Contact.3 \ + Bio::MAGETAB::Investigation.3 \ + Bio::MAGETAB::Comment.3 \ + Bio::MAGETAB::Sample.3 \ + Bio::MAGETAB::Publication.3 \ + Bio::MAGETAB::DataFile.3 \ + Bio::MAGETAB::Event.3 \ + Bio::MAGETAB::Edge.3 \ + Bio::MAGETAB::ArrayDesign.3 \ + Bio::MAGETAB.3 \ + Bio::MAGETAB::Util::Writer::ADF.3 \ + Bio::MAGETAB::MatrixColumn.3 \ + Bio::MAGETAB::Normalization.3 \ + Bio::MAGETAB::Util::Reader::TagValueFile.3 \ + Bio::MAGETAB::ParameterValue.3 \ + Bio::MAGETAB::Util::Reader::Tabfile.3 \ + Bio::MAGETAB::Util::Writer.3 \ + Bio::MAGETAB::Util::Writer::Tabfile.3 \ + Bio::MAGETAB::DataAcquisition.3 \ + Bio::MAGETAB::Util::Reader::SDRF.3 \ + Bio::MAGETAB::Assay.3 \ + Bio::MAGETAB::SDRFRow.3 \ + Bio::MAGETAB::Util::Writer::IDF.3 \ + Bio::MAGETAB::SDRF.3 \ + Bio::MAGETAB::MatrixRow.3 \ + Bio::MAGETAB::Data.3 \ + Bio::MAGETAB::Util::Reader.3 \ + Bio::MAGETAB::Extract.3 \ + Bio::MAGETAB::Util::Reader::IDF.3 \ + Bio::MAGETAB::TermSource.3 \ + Bio::MAGETAB::Measurement.3 \ + Bio::MAGETAB::Util::Builder.3 \ + Bio::MAGETAB::CompositeElement.3 \ + Bio::MAGETAB::Node.3 \ + Bio::MAGETAB::Util::DBLoader.3 \ + Bio::MAGETAB::BaseClass.3 \ + Bio::MAGETAB::Util::Writer::SDRF.3 \ + Bio::MAGETAB::Protocol.3 \ + Bio::MAGETAB::Reporter.3 \ + Bio::MAGETAB::Util::Reader::ADF.3 \ + Bio::MAGETAB::Factor.3 \ + Bio::MAGETAB::DatabaseEntry.3 \ + Bio::MAGETAB::Feature.3 \ + Bio::MAGETAB::LabeledExtract.3 \ + Bio::MAGETAB::ProtocolApplication.3 \ + Bio::MAGETAB::Util::RewriteAE.3 \ + Bio::MAGETAB::Source.3 \ + Bio::MAGETAB::Util::Persistence.3 \ + Bio::MAGETAB::Util::Writer::GraphViz.3 \ + Bio::MAGETAB::DataMatrix.3 \ + Bio::MAGETAB::FactorValue.3 \ + Bio::MAGETAB::ProtocolParameter.3 + +post-extract: + @${REINPLACE_CMD} -e 's?auto_install?#auto_install?g' \ + ${WRKSRC}/Makefile.PL + +.include <bsd.port.mk> |