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Diffstat (limited to 'biology/py-orange3-single-cell/Makefile')
| -rw-r--r-- | biology/py-orange3-single-cell/Makefile | 46 |
1 files changed, 0 insertions, 46 deletions
diff --git a/biology/py-orange3-single-cell/Makefile b/biology/py-orange3-single-cell/Makefile deleted file mode 100644 index 54d72a4516fd..000000000000 --- a/biology/py-orange3-single-cell/Makefile +++ /dev/null @@ -1,46 +0,0 @@ -PORTNAME= orange3-single-cell -DISTVERSION= 0.8.2 -PORTREVISION= 6 -CATEGORIES= biology python -PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} - -MAINTAINER= yuri@FreeBSD.org -COMMENT= Orange add-on for gene expression of single cell data -WWW= https://singlecell.biolab.si/ - -LICENSE= AGPLv3+ - -DEPRECATED= Depends on expired math/py-fastdtw and expiring misc/orange3 -EXPIRATION_DATE=2025-06-21 - -RUN_DEPENDS= orange3>0:misc/orange3 \ - ${PYTHON_PKGNAMEPREFIX}orange3-bioinformatics>0:biology/py-orange3-bioinformatics@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}astropy>0:astro/py-astropy@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}fastdtw>0:math/py-fastdtw@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}joblib>=0.11:devel/py-joblib@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}loompy>=2.0.10:biology/py-loompy@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}networkx>0:math/py-networkx@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}pandas>=0.23:math/py-pandas@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}scikit-learn>0:science/py-scikit-learn@${PY_FLAVOR} \ - ${PYNUMPY} - -# Supports 3.4+ but loompy 3.6+ only. -USES= python -USE_GITHUB= yes -GH_ACCOUNT= biolab -USE_PYTHON= distutils autoplist - -NO_ARCH= yes - -OPTIONS_DEFINE= DOCS - -DOCS_BUILD_DEPENDS= gmake:devel/gmake \ - ${PYTHON_PKGNAMEPREFIX}sphinx>=0,1:textproc/py-sphinx@${PY_FLAVOR} - -pre-build-DOCS-on: - @cd ${WRKSRC}/doc && ${SETENV} ${MAKE_ENV} ${GMAKE} html htmlhelp SPHINXBUILD=${LOCALBASE}/bin/sphinx-build-${PYTHON_VER} - -pre-build-DOCS-off: - @${REINPLACE_CMD} "s|^ include_documentation| #include_documentation|" ${WRKSRC}/setup.py - -.include <bsd.port.mk> |