aboutsummaryrefslogtreecommitdiff
path: root/biology/freebayes
Commit message (Collapse)AuthorAgeFilesLines
* One more small cleanup, forgotten yesterday.Mathieu Arnold2021-04-071-1/+0
| | | | Reported by: lwhsu
* Remove # $FreeBSD$ from Makefiles.Mathieu Arnold2021-04-061-1/+0
|
* For ports on riscv64 that fail the same (or similar ways) to aarch64, markMark Linimon2021-01-021-0/+1
| | | | | | | | | | | them BROKEN. While here, pet portlint (Makevar order). Approved by: portmgr (tier-2 blanket) Notes: svn path=/head/; revision=559904
* Fix build with -fno-commonStefan Eßer2020-09-213-1/+23
| | | | Notes: svn path=/head/; revision=549476
* Bump PORTREVISION for ports depending on the canonical version of GCCGerald Pfeifer2019-07-261-1/+1
| | | | | | | | | | | | | | | | | | as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3 to GCC 9.1 under most circumstances now after revision 507371. This includes ports - with USE_GCC=yes or USE_GCC=any, - with USES=fortran, - using Mk/bsd.octave.mk which in turn features USES=fortran, and - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang, c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib plus, everything INDEX-11 shows with a dependency on lang/gcc9 now. PR: 238330 Notes: svn path=/head/; revision=507372
* Bump PORTREVISION for ports depending on the canonical version of GCCGerald Pfeifer2018-12-121-0/+1
| | | | | | | | | | | | | | | | | | defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t GCC 8.2 under most circumstances. This includes ports - with USE_GCC=yes or USE_GCC=any, - with USES=fortran, - using Mk/bsd.octave.mk which in turn features USES=fortran, and - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang, c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib plus, as a double check, everything INDEX-11 showed depending on lang/gcc7. PR: 231590 Notes: svn path=/head/; revision=487272
* Upgrade these ports to USES=compiler:c++11-lang to fix build on gcc-basedMark Linimon2018-09-181-1/+1
| | | | | | | | | | | | | archs such as powerpc64. Tested for no effect on amd64. While here, pet portlint. Approved by: portgmr (tier-2 blanket) Notes: svn path=/head/; revision=480003
* Mark as broken on aarch64, and, where appropriate, armvX.Mark Linimon2018-06-211-0/+4
| | | | | | | | | While here, pet portlint. Approved by: portmgr (tier-2 blanket) Notes: svn path=/head/; revision=473009
* biology/freebayes: Bayesian haplotype-based polymorphism discovery and ↵Jason W. Bacon2018-04-2013-0/+292
genotyping Approved by: jrm (mentor) Differential Revision: https://reviews.freebsd.org/D15116 Notes: svn path=/head/; revision=467806