ports - FreeBSD ports tree

	Commit message (Collapse)	Author	Age	Files	Lines
*	One more small cleanup, forgotten yesterday.	Mathieu Arnold	2021-04-07	1	-1/+0
\| \| \| \|	Reported by: lwhsu
*	Remove # $FreeBSD$ from Makefiles.	Mathieu Arnold	2021-04-06	1	-1/+0
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*	biology/viennarna: Update 2.4.16 -> 2.4.17	Yuri Victorovich	2020-12-06	4	-17/+6
\| \| \| \|	Notes: svn path=/head/; revision=557171
*	biology/viennarna: Update 2.4.15 -> 2.4.16	Yuri Victorovich	2020-11-11	3	-4/+5
\| \| \| \|	Notes: svn path=/head/; revision=554920
*	biology/viennarna: Update 2.4.14 -> 2.4.15	Yuri Victorovich	2020-09-07	2	-5/+4
\| \| \| \|	Notes: svn path=/head/; revision=547949
*	- update libgd to 2.3.0	Dirk Meyer	2020-05-04	1	-0/+1
\| \| \| \| \| \| \| \| \|	- new option RAQM - resurrect deprecated gdlib-config - bump dependend ports Notes: svn path=/head/; revision=533989
*	biology/viennarna: Update 2.4.13 -> 2.4.14	Yuri Victorovich	2020-01-06	3	-5/+8
\| \| \| \| \| \| \|	Reported by: repology Notes: svn path=/head/; revision=522200
*	Add USES=xorg USES=gl, ports categories b	Niclas Zeising	2019-11-04	1	-1/+1
\| \| \| \| \| \| \| \|	Add USES=xorg, USES=gl and in a few cases USES=gnome to ports in categories starting with 'b'. Notes: svn path=/head/; revision=516742
*	math/gsl: update to 2.6	Tobias C. Berner	2019-10-25	1	-1/+1
\| \| \| \| \| \| \| \| \| \| \| \| \|	- math/p5-Math-GSL does not seem to have any upstream activity to make it work with this version -> mark it broken - this also breaks the two consumers of this port - biology/gemma: has a conflict with cblas, and is makred broken. PR: 241363 Exp-run by: antoine Notes: svn path=/head/; revision=515671
*	Bump PORTREVISION for ports depending on the canonical version of GCC	Gerald Pfeifer	2019-07-26	1	-0/+1
\| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \|	as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3 to GCC 9.1 under most circumstances now after revision 507371. This includes ports - with USE_GCC=yes or USE_GCC=any, - with USES=fortran, - using Mk/bsd.octave.mk which in turn features USES=fortran, and - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang, c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib plus, everything INDEX-11 shows with a dependency on lang/gcc9 now. PR: 238330 Notes: svn path=/head/; revision=507372
*	biology/viennarna: Make it less/not prone to failures due to hardcoded C++ ↵	Yuri Victorovich	2019-06-24	5	-29/+15
\| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \|	library name configure and Makefile.in provided in tarballs have -lstdc++ hard-coded in them. The previous version of the port patches these to be -lc++, which still might fail on gcc systems, depending on which C++ library is used. This change adds USES=autoreconf which makes it to regenerate configure and Makefile.in and hopefully have the proper C++ library in these files. GNU libtool links with the C compiler, not with the C++ compiler, in this project. This is what I think triggers link failures due to a wrong C++ library getting into the link lines. GNU libtool likely chooses C compiler because this project has its 'main' functions in .c files, but also includes C++ object modules. This likely causes GNU tools confusion and it uses the C compiler to link and fails due to wrong C++ libraries added there. Notes: svn path=/head/; revision=505049
*	New port: biology/viennarna: Alignment tools for the structural analysis of RNA	Yuri Victorovich	2019-06-24	8	-0/+330
	Notes: svn path=/head/; revision=505017