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* Upgrade Code_Aster to 14.6.0-1.Thierry Thomas2020-11-267-0/+2273
| | | | | | | | | | | | | | | | | | | | This implies: - french /aster builds fine with clang, but it seg-faults: switched to Gcc - ASTK is upgraded to 2019.0-1 - math/mumps is upgraded to 5.1.2-aster7 - TFEL/MFront is now required, but when the compilers of tfel and aster are different, it cannot be linked . recopopy science/tfel to science/tfel-edf and depends on science/tfel-edf . science/tfel-edf is built by Gcc, from the sources included in Aster's tarball . register the conflicts Notes: svn path=/head/; revision=556349
* - Bump PORTREVISION. fpc was updated to 3.2.0Jose Alonso Cardenas Marquez2020-11-252-4/+4
| | | | Notes: svn path=/head/; revision=556262
* science/lammps: Fix build broken by the latest kim-api update.Yuri Victorovich2020-11-222-1/+6
| | | | Notes: svn path=/head/; revision=556029
* Update to 2.2.0Sunpoet Po-Chuan Hsieh2020-11-212-4/+4
| | | | | | | Changes: https://github.com/rgeo/rgeo/blob/master/History.md Notes: svn path=/head/; revision=555928
* Update to 4.4.0Sunpoet Po-Chuan Hsieh2020-11-212-5/+5
| | | | | | | | Changes: https://github.com/levitsky/pyteomics/releases https://pyteomics.readthedocs.io/en/latest/changelog.html Notes: svn path=/head/; revision=555859
* Update to 2.19.1Sunpoet Po-Chuan Hsieh2020-11-212-4/+4
| | | | | | | Changes: https://confluence.ecmwf.int/display/ECC/Latest+news Notes: svn path=/head/; revision=555826
* Add education virtual categoryAdam Weinberger2020-11-205-5/+5
| | | | | | | | PR: 248402 Submitted by: PauAmma Notes: svn path=/head/; revision=555738
* science/kim-api: Update 2.1.3 -> 2.2.0Yuri Victorovich2020-11-203-10/+21
| | | | Notes: svn path=/head/; revision=555727
* science/jmol: Update 14.31.17 -> 14.31.18Yuri Victorovich2020-11-203-4/+5
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=555722
* science/yoda: Update 1.8.3 -> 1.8.4Yuri Victorovich2020-11-183-4/+8
| | | | Notes: svn path=/head/; revision=555656
* graphics/proj: Update to 7.2.0Loïc Bartoletti2020-11-183-3/+3
| | | | | | | | Changelog: - https://proj.org/news.html#release-notes Notes: svn path=/head/; revision=555622
* Add workaround for new failure with Fortran GCC 10 frontend:Mark Linimon2020-11-171-1/+8
| | | | | | | | | | Type mismatch between actual argument at (1) and actual argument at (2) (COMPLEX(8)/REAL(8)). PR: 246700 Approved by: maintainer Notes: svn path=/head/; revision=555606
* Add workaround for new failure with Fortran GCC 10 frontend:Mark Linimon2020-11-171-1/+9
| | | | | | | | | | BOZ literal constant at (1) is neither a data-stmt-constant nor an actual argument to INT, REAL, DBLE, or CMPLX intrinsic function PR: 246700 Approved by: maintainer Notes: svn path=/head/; revision=555605
* Add workaround for new failure with Fortran GCC 10 frontend:Mark Linimon2020-11-171-0/+8
| | | | | | | | | | Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/REAL(4)). PR: 246700 Approved by: maintainer Notes: svn path=/head/; revision=555604
* Add workaround for new failure with Fortran GCC 10 frontend:Mark Linimon2020-11-171-1/+9
| | | | | | | | | | Type mismatch in argument 't' at (1); passed REAL(4) to INTEGER(4) PR: 246700 Approved by: maintainer Notes: svn path=/head/; revision=555603
* Add workaround for new failure with Fortran GCC 10 frontend:Mark Linimon2020-11-171-0/+8
| | | | | | | | | | Type mismatch between actual argument at (1) and actual argument at (2) (COMPLEX(8)/REAL(8)). PR: 246700 Approved by: maintainer Notes: svn path=/head/; revision=555602
* Add workaround for new failure with Fortran GCC 10 frontend:Mark Linimon2020-11-172-3/+12
| | | | | | | | | | Type mismatch in argument 'cc' at (1); passed COMPLEX(8) to REAL(8) PR: 246700 Approved by: maintainer Notes: svn path=/head/; revision=555601
* Add workaround for new failure with Fortran GCC 10 frontend:Mark Linimon2020-11-171-1/+9
| | | | | | | | | | Type mismatch between actual argument at (1) and actual argument at (2) (COMPLEX(8)/CHARACTER(*)). PR: 246700 Approved by: maintainer Notes: svn path=/head/; revision=555600
* Add workaround for Fortran frontend to GCC 10.Mark Linimon2020-11-171-3/+11
| | | | | | | | | While here, pet portlint. PR: 246700 Notes: svn path=/head/; revision=555596
* Mark BROKEN on i386 and GCC 10:Mark Linimon2020-11-171-1/+7
| | | | | | | | | | | | | | Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/REAL(4)). Per the maintainer, this is probably an error in GCC 10's i386 Fortran frontend. But, this should not hold up our update to GCC 10 as ports default. PR: 246700 (partial) Approved by: maintainer Notes: svn path=/head/; revision=555588
* Mark as BROKEN with GCC 10:Mark Linimon2020-11-171-2/+6
| | | | | | | | | | | | | | | Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/REAL(4)). The maintainer notes that this program is obsolete, and that most people now use versions 3 or 4 (which are, unfortunately, non- redistributable). As well, it is already marked DEPRECATED/EXPIRING. Approved by: maintainer Notes: svn path=/head/; revision=555587
* graphics/proj: Update to 7.1.1Loïc Bartoletti2020-11-173-1/+3
| | | | | | | | | | | | | | | | | - Add a pkg-message explaining how to access or sync datum grids from the CDN (disabled by default) - Add curl and tiff dependencies since proj can read datum grids from remote COG (Cloud Optimized Geotiff) - Take maintainer'ship (ok wen@) PR: 245611 Submitted by: wen (first version) Reviewed by: wen, rhurlin Approved by: wen Exp-run by: antoine Notes: svn path=/head/; revision=555543
* science/quantum-espresso: Update 6.5 -> 6.6Yuri Victorovich2020-11-163-26/+21
| | | | Notes: svn path=/head/; revision=555449
* science/libcint: Update 4.0.5 -> 4.0.6Yuri Victorovich2020-11-162-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=555447
* science/dalton: Update 2018.2 -> 2020.0Yuri Victorovich2020-11-165-56/+43
| | | | Notes: svn path=/head/; revision=555443
* science/py-gsd: Update 2.3.0 -> 2.4.0Yuri Victorovich2020-11-152-5/+5
| | | | Notes: svn path=/head/; revision=555427
* Update to 20.10.30Sunpoet Po-Chuan Hsieh2020-11-152-4/+5
| | | | | | | | | - Add NO_ARCH Changes: https://github.com/mrJean1/PyGeodesy/commits/master Notes: svn path=/head/; revision=555332
* Update to 1.0.4.post1Sunpoet Po-Chuan Hsieh2020-11-153-6/+8
| | | | | | | | | | - Update WWW Changes: https://github.com/sgkasselau/pyaixi/releases https://github.com/sgkasselau/pyaixi/commits/master Notes: svn path=/head/; revision=555331
* Update to 0.1.7Sunpoet Po-Chuan Hsieh2020-11-152-5/+4
| | | | | | | Changes: https://github.com/skulumani/kinematics/commits/master Notes: svn path=/head/; revision=555330
* Update to 0.2.1.post1Sunpoet Po-Chuan Hsieh2020-11-153-12/+5
| | | | | | | | Changes: https://github.com/geomet/geomet/releases https://github.com/geomet/geomet/commits/master Notes: svn path=/head/; revision=555329
* Update to 0.9.9Sunpoet Po-Chuan Hsieh2020-11-152-5/+5
| | | | | | | Changes: https://github.com/ecmwf/eccodes-python/blob/master/CHANGELOG.rst Notes: svn path=/head/; revision=555328
* Update to 2.19.0Sunpoet Po-Chuan Hsieh2020-11-155-129/+23
| | | | | | | Changes: https://confluence.ecmwf.int/display/ECC/Latest+news Notes: svn path=/head/; revision=555271
* science/afni: update to 20.3.02Fernando Apesteguía2020-11-153-12/+10
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=555239
* - Upgrade cad/opencascade to 7.5.0Thierry Thomas2020-11-141-0/+1
| | | | | | | | | | Release notes at <https://old.opencascade.com/sites/default/files/documents/release_notes_7.5.0.pdf> - Bump PORTREVISION of consumers. Notes: svn path=/head/; revision=555127
* science/py-chainer: Update 7.2.0 -> 7.7.0Yuri Victorovich2020-11-142-5/+4
| | | | Notes: svn path=/head/; revision=555123
* science/py-gpaw: Update 1.5.2 -> 20.10.0Yuri Victorovich2020-11-142-10/+8
| | | | Notes: svn path=/head/; revision=555094
* science/qbox: Update 1.72.1 -> 1.72.2Yuri Victorovich2020-11-142-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=555073
* science/jmol: Update 14.31.16 -> 14.31.17Yuri Victorovich2020-11-142-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=555072
* science/agrum: Update 0.18.1 -> 0.18.2Yuri Victorovich2020-11-133-6/+6
| | | | | | | | | Changelog: https://gitlab.com/agrumery/aGrUM/-/blob/master/CHANGELOG.md MFH: 2020Q4 (bugfix release) Notes: svn path=/head/; revision=555008
* science/qmcpack: Update 3.9.2 -> 3.10.0Yuri Victorovich2020-11-132-5/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=555002
* science/py-qspin: Update 0.1.8 -> 2.3.2Yuri Victorovich2020-11-112-7/+8
| | | | Notes: svn path=/head/; revision=554877
* science/py-rmsd: Update 1.3.2 -> 1.4Yuri Victorovich2020-11-112-5/+4
| | | | Notes: svn path=/head/; revision=554876
* science/tinker: Update 8.8.1 -> 8.8.3Yuri Victorovich2020-11-104-6/+13
| | | | Notes: svn path=/head/; revision=554859
* - Update to 2.42TAKATSU Tomonari2020-11-102-4/+5
| | | | Notes: svn path=/head/; revision=554830
* Prefer graphics/ligvrsvg2-rust over graphics/librsvg2Tobias C. Berner2020-11-092-4/+3
| | | | | | | | | | | | | | - switch to the more modern version of librsvg2 on architectures supporting rust - this will fix some graphical issues on these architectures PR: 250276 Exp-run by: antoine Submitted by: tobik Differential Revision: https://reviews.freebsd.org/D18878 Notes: svn path=/head/; revision=554733
* Add compiler:c++11-lang to USES to fix build on GCC-based systems:Mark Linimon2020-11-081-1/+1
| | | | | | | | | /wrkdirs/usr/ports/science/py-segyio/work-py37/segyio-1.9.3/segyio/segyio.cpp:1461: error: 'uint16_t' is not a member of 'std' Approved by: portmgr (tier-2 blanket) Notes: svn path=/head/; revision=554520
* Update to 2.42Sunpoet Po-Chuan Hsieh2020-11-082-4/+4
| | | | | | | Changes: https://github.com/cjlin1/liblinear/commits/master Notes: svn path=/head/; revision=554489
* Update to 1.9.9Sunpoet Po-Chuan Hsieh2020-11-088-87/+70
| | | | | | | Changes: https://code.mpimet.mpg.de/projects/cdo/news Notes: svn path=/head/; revision=554488
* Add compiler:c++11-lang to USES to fix build on GCC-based systems:Mark Linimon2020-11-081-1/+1
| | | | | | | | | /wrkdirs/usr/ports/science/segyio/work/segyio-1.9.3/applications/flip-endianness.cpp:25: error: ISO C++ forbids declaration of 'out' with no type Approved by: portmgr (tier-2 blanket) Notes: svn path=/head/; revision=554471
* New port: science/py-segyio: Python binding for segyio, the seismic data libraryYuri Victorovich2020-11-084-0/+37
| | | | Notes: svn path=/head/; revision=554431
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