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* science/agrum: update 2.3.0 → 2.3.2Yuri Victorovich5 hours2-7/+6
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* science/R-cran-Epi: Update to 2.65TAKATSU Tomonari20 hours2-4/+4
| | | | Reported by: portscout
* science/avogadro2: update 1.100.0 → 2.0.0Yuri Victorovich23 hours2-4/+4
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* science/{,py-}avogadrolibs: update 1.100.0 → 2.0.0Yuri Victorovich23 hours6-2909/+2956
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* KDE: Update KDE Gear to 26.04.0Max Brazhnikov37 hours2-6/+6
| | | | | | | | | | | | | | | | | | | | | | Announcement: https://kde.org/announcements/gear/26.04.0/ Ports changes: audio/libkcompactdisc: - Remove port, no longer shipped with KDE Gear deskutils/kdeconnect-kde: - Add dependency on libei misc/minuet: - Add missing dependencies - Add patch to restore parity with Linux net/krdc: - Update dependencies x11/yakuake: - Add missing dependencies
* science/{,py-}ncrystal: update 4.3.2 → 4.3.4Yuri Victorovich48 hours5-21/+9
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* science/py-dlib: Update to 20.0.1Gleb Popov4 days2-5/+5
| | | | Reported by: portscout!
* science/dlib-cpp: Update to 20.0.1Gleb Popov4 days3-8/+8
| | | | Reported by: portscout!
* science/afni: Update to 26.1.00Fernando Apesteguía4 days2-4/+4
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* science/openmolcas: update 25.10 → 26.02Yuri Victorovich4 days4-43/+11
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* science/py-pyphot: update 1.6.0 → 2.1.1Yuri Victorovich4 days2-10/+18
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* science/py-vedo: update 2025.5.4 → 2026.6.1Yuri Victorovich4 days2-5/+6
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* science/colt: Remove expired portRene Ladan5 days4-63/+0
| | | | 2026-04-13 science/colt: java 8 only, unmaintained, no users in the ports tree, latest release was 2004
* science/{,py-}ncrystal: update 4.2.8 → 4.3.2Yuri Victorovich5 days6-16/+29
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* science/votca: update 2025.1 → 2026Yuri Victorovich6 days3-709/+9
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* science/mp2d: update f20190610 → g20250131Yuri Victorovich6 days2-5/+5
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* science/py-arch: update 6.3.0 → 8.0.0Yuri Victorovich7 days3-23/+23
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* various: Bump go ports for go-1.25.9 / 1.26.2Dag-Erling Smørgrav8 days2-2/+2
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* math/elpa: update 2021.11.001 → 2026.02.001Yuri Victorovich8 days2-1/+2
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* science/gramps: Update to 6.0.8Nuno Teixeira8 days2-4/+4
| | | | | ChangeLog: https://github.com/gramps-project/gramps/releases/tag/v6.0.8 MFH: 2026Q2 (maintenance release)
* science/py-tensorflow: Fix testsYuri Victorovich12 days1-2/+5
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* science/fasthenry: Format patches with makepatchRodrigo Osorio12 days2-5/+5
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* science/fasthenry: Add missing patch from previous commitRodrigo Osorio12 days1-0/+11
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* science/fasthenry: Update build to use clang instead of gccRodrigo Osorio12 days2-4/+46
| | | | | | | Also fix CFLAG usage in Makefiles and config script. Bump PORTREVISION. Reported by: gerald
* science/py-scipy: Strip shared libraryPo-Chuan Hsieh12 days1-0/+4
| | | | - Bump PORTREVISION for package change
* science/py-tobler: Update version requirement of RUN_DEPENDSPo-Chuan Hsieh13 days2-8/+3
| | | | - Bump PORTREVISION for package change
* science/py-libpysal: Update version requirement of RUN_DEPENDSPo-Chuan Hsieh13 days2-13/+2
| | | | - Bump PORTREVISION for package change
* science/py-esda: Update version requirement of RUN_DEPENDSPo-Chuan Hsieh13 days1-1/+1
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* science/py-eccodes: Update to 2.46.0Po-Chuan Hsieh13 days2-5/+4
| | | | Changes: https://github.com/ecmwf/eccodes-python/releases
* science/eccodes: Update to 2.46.0Po-Chuan Hsieh13 days3-12/+61
| | | | Changes: https://confluence.ecmwf.int/display/ECC/Latest+news
* graphics/gdal: Update to 3.12.2Po-Chuan Hsieh13 days1-1/+1
| | | | | | | - Bump PORTREVISION of dependent ports for shlib change Changes: https://github.com/OSGeo/gdal/releases https://github.com/OSGeo/gdal/blob/release/3.12/NEWS.md
* science/netcdf: Update to 4.10.0Po-Chuan Hsieh13 days3-5/+7
| | | | Changes: https://github.com/Unidata/netcdf-c/releases
* science/libaec: Update to 1.1.6Po-Chuan Hsieh13 days3-8/+8
| | | | | | | | - Update MASTER_SITES - Update WWW Changes: https://github.com/Deutsches-Klimarechenzentrum/libaec/releases https://github.com/Deutsches-Klimarechenzentrum/libaec/blob/master/CHANGELOG.md
* science/cgribex: Update to 2.3.1Po-Chuan Hsieh13 days3-36/+24
| | | | | | | | | | | | | | | | | | | | | | | | Changes: 2024-10-13 Uwe Schulzweida 2.3.0: - Removed dtypes.h 2.2.0: 2.1.1: - pwr6_minmax_val_double_unrolled6: remove register attribute 2.1.0: - Replaced CDI timebase by julian_date 2.0.2: - Replaced CDI timebase by julian_date 2.0.1: - Store result of CGRIBEX_FPSCALE to double - avx_encode_array_2byte_double: Enforce availability of vectorization in function.
* science/cdo: Update to 2.6.0Po-Chuan Hsieh13 days2-6/+5
| | | | Changes: https://code.mpimet.mpg.de/projects/cdo/news
* science/py-tensorflow: Fix unresolved symbol at run-time; Add test targetsYuri Victorovich14 days41-517/+517
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* science/py-scipy: update to 1.17.1Charlie Li2026-04-035-118/+58
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Changelogs: - https://docs.scipy.org/doc/scipy/release/1.17.0-notes.html (minor versions no longer offered) - https://docs.scipy.org/doc/scipy/release/1.16.3-notes.html - https://docs.scipy.org/doc/scipy/release/1.16.2-notes.html - https://docs.scipy.org/doc/scipy/release/1.16.1-notes.html - https://docs.scipy.org/doc/scipy/release/1.16.0-notes.html - https://docs.scipy.org/doc/scipy/release/1.15.3-notes.html - https://docs.scipy.org/doc/scipy/release/1.15.2-notes.html - https://docs.scipy.org/doc/scipy/release/1.15.1-notes.html - https://docs.scipy.org/doc/scipy/release/1.15.0-notes.html - https://docs.scipy.org/doc/scipy/release/1.14.1-notes.html - https://docs.scipy.org/doc/scipy/release/1.14.0-notes.html - https://docs.scipy.org/doc/scipy/release/1.13.1-notes.html - https://docs.scipy.org/doc/scipy/release/1.13.0-notes.html - https://docs.scipy.org/doc/scipy/release/1.12.0-notes.html - https://docs.scipy.org/doc/scipy/release/1.11.4-notes.html - https://docs.scipy.org/doc/scipy/release/1.11.3-notes.html - https://docs.scipy.org/doc/scipy/release/1.11.2-notes.html Switch from distutils to PEP-517. PR: 277826 Reported by: wen Tested by: michaelo, makc, wen (previous iteration) exp-run by: antoine (previous iteration) Differential Revision: https://reviews.freebsd.org/D42144
* python.mk: retire ${PYNUMPY}Charlie Li2026-04-03122-154/+154
| | | | | With both math/py-numpy (2) and math/py-numpy1, the variable stopped making sense. Also remove the upper version bound.
* math/py-numpy1: bump more RUN_DEPENDS consumersCharlie Li2026-04-0324-13/+24
| | | | | | These specify numpy indirectly using a different variable. PR: 281470
* math/py-numpy: switch all consumers to math/py-numpy1Charlie Li2026-04-03112-95/+140
| | | | | | ...and bump PORTREVISIONs of consumers with hard RUN_DEPENDS PR: 281470
* */*: bump portrevision after java_default=25 updateRonald Klop2026-04-0210-9/+10
| | | | | | Included all ports that have USES=java. PR: 293559
* science/py-xbout: update 0.3.5 → 0.3.8Yuri Victorovich2026-04-013-13/+25
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* science/py-boututils: update 0.1.9 → 0.2.1Yuri Victorovich2026-04-012-11/+9
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* science/py-boutdata: update 0.1.10 → 0.4.0Yuri Victorovich2026-04-012-9/+15
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* science/py-asap3: update 3.12.8 → 3.13.11Yuri Victorovich2026-04-012-6/+10
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* science/py-dwave-ocean-sdk: update 9.0.0 → 9.3.0Yuri Victorovich2026-04-012-10/+10
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* science/py-dwave-cloud-client: update 0.14.0 → 0.14.4Yuri Victorovich2026-04-012-4/+4
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* science/py-dwave-system: update 1.33.0 → 1.34.0Yuri Victorovich2026-04-012-4/+4
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* science/afni: Update to 26.0.11Fernando Apesteguía2026-04-012-4/+4
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* science/axom: update 0.10.1 → 0.13.0Yuri Victorovich2026-04-013-58/+267
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