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PORTNAME= mothur
DISTVERSIONPREFIX= v
DISTVERSION= 1.43.0
CATEGORIES= biology
MAINTAINER= yuri@FreeBSD.org
COMMENT= Software for bioinformatics of the microbial ecology community
LICENSE= GPLv3
LICENSE_FILE= ${WRKSRC}/LICENSE.md
BUILD_DEPENDS= bash:shells/bash
USES= compiler:c++11-lang gmake localbase readline shebangfix
SHEBANG_FILES= source/uchime_src/mk
USE_GITHUB= yes
ALL_TARGET= ${PORTNAME}
BINARY_ALIAS= g++=${CXX}
EXES= ${PORTNAME} uchime
PLIST_FILES= ${EXES:S/^/bin\//}
do-install: # https://github.com/mothur/mothur/issues/615
.for e in ${EXES}
${INSTALL_PROGRAM} ${WRKSRC}/${e} ${STAGEDIR}${PREFIX}/bin
.endfor
.include <bsd.port.mk>
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