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| author | Kai Knoblich <kai@FreeBSD.org> | 2021-04-21 07:44:44 +0000 |
|---|---|---|
| committer | Kai Knoblich <kai@FreeBSD.org> | 2021-04-21 07:44:44 +0000 |
| commit | 256e9bc3b5b97069231e16e2be057e313e9bb7bc (patch) | |
| tree | a8afb3578c105cb997a2c3e716ba287bcfb0b256 /biology | |
| parent | e8c9857f5d7d32b517418fb317e827718430442b (diff) | |
| download | ports-256e9bc3b5b97069231e16e2be057e313e9bb7bc.tar.gz ports-256e9bc3b5b97069231e16e2be057e313e9bb7bc.zip | |
biology/py-crossmap: Fix build with Python 3.8+
* Add missing dependency devel/py-nose that is required to build. With
Python 3.6/3.7 there are no build issues because the sdist contains
Python Eggs of "nose" for these versions.
While I'm here:
* Set NO_ARCH because the port has no architecture specific files.
* Make it concurrent safe, package installs a script and bump
PORTREVISION due package change.
PR: 253815
Approved by: portmgr (build fix)
MFH: No (The port was added after the 2021Q1 branch)
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/py-crossmap/Makefile | 6 |
1 files changed, 5 insertions, 1 deletions
diff --git a/biology/py-crossmap/Makefile b/biology/py-crossmap/Makefile index 7946de949b5e..30b8bee8f5af 100644 --- a/biology/py-crossmap/Makefile +++ b/biology/py-crossmap/Makefile @@ -1,5 +1,6 @@ PORTNAME= crossmap DISTVERSION= 0.5.2 +PORTREVISION= 1 CATEGORIES= biology python MASTER_SITES= CHEESESHOP PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -11,11 +12,14 @@ COMMENT= Lift over genomics coordinates between assemblies LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE.txt +BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}nose>0.10.4:devel/py-nose@${PY_FLAVOR} RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pysam>0:biology/py-pysam@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}bx-python>0:biology/py-bx-python@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}pyBigWig>0:biology/py-bigwig@${PY_FLAVOR} USES= python:3.5+ -USE_PYTHON= autoplist cython distutils +USE_PYTHON= autoplist concurrent cython distutils + +NO_ARCH= yes .include <bsd.port.mk> |