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| author | Tijl Coosemans <tijl@FreeBSD.org> | 2021-12-05 10:38:43 +0000 |
|---|---|---|
| committer | Tijl Coosemans <tijl@FreeBSD.org> | 2021-12-12 18:46:22 +0000 |
| commit | 68b99b391349672d7f70e7ac89d430b8dbe32850 (patch) | |
| tree | 537d227bf77a71dd80b85d2b08dd8b40cdb40dae /biology | |
| parent | 6bcd9d2f051da55e897d17ad5add3c91268faa4f (diff) | |
| download | ports-68b99b391349672d7f70e7ac89d430b8dbe32850.tar.gz ports-68b99b391349672d7f70e7ac89d430b8dbe32850.zip | |
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/cufflinks/files/patch-configure.ac | 21 | ||||
| -rw-r--r-- | biology/phyml/files/patch-configure.ac | 10 |
2 files changed, 29 insertions, 2 deletions
diff --git a/biology/cufflinks/files/patch-configure.ac b/biology/cufflinks/files/patch-configure.ac index e40d507ff95b..5d8f553f27ad 100644 --- a/biology/cufflinks/files/patch-configure.ac +++ b/biology/cufflinks/files/patch-configure.ac @@ -1,6 +1,15 @@ ---- configure.ac.orig 2019-05-29 06:53:24 UTC +--- configure.ac.orig 2019-07-06 16:28:01 UTC +++ configure.ac -@@ -77,9 +77,10 @@ case "${host_cpu}-${host_os}" in +@@ -14,7 +14,7 @@ AC_DEFINE(SVN_REVISION, "svnversion", [SVN Revision]) + AC_CONFIG_SRCDIR([config.h.in]) + AC_CONFIG_HEADERS([config.h]) + AC_CONFIG_AUX_DIR([build-aux]) +-AM_INIT_AUTOMAKE ++AM_INIT_AUTOMAKE([-Wall tar-pax foreign]) + + #AM_PATH_CPPUNIT(1.10.2) + +@@ -78,9 +78,10 @@ case "${host_cpu}-${host_os}" in AC_COMPILE_IFELSE([AC_LANG_PROGRAM], [ext_CFLAGS="-arch x86_64"], []);; *) AC_MSG_CHECKING([if gcc accepts -m64]) @@ -14,3 +23,11 @@ esac AC_ARG_ENABLE(vectorize, [ --enable-vectorize Enable GCC auto-vectorization], +@@ -120,7 +121,6 @@ LDFLAGS="${ext_LDFLAGS} ${user_LDFLAGS}" + AC_CHECK_MEMBERS([struct sysinfo.totalram], [], [], [#include <sys/sysinfo.h>]) + AC_CHECK_DECLS([sysctl, CTL_HW, HW_PHYSMEM], [], [], [#include <sys/sysctl.h>]) + +-AM_INIT_AUTOMAKE([-Wall tar-pax foreign]) + + AC_CONFIG_FILES([Makefile + src/Makefile]) diff --git a/biology/phyml/files/patch-configure.ac b/biology/phyml/files/patch-configure.ac new file mode 100644 index 000000000000..c96d56cf91bc --- /dev/null +++ b/biology/phyml/files/patch-configure.ac @@ -0,0 +1,10 @@ +--- configure.ac.orig 2020-07-09 11:49:16 UTC ++++ configure.ac +@@ -10,7 +10,6 @@ AC_CONFIG_HEADERS([config.h]) + AC_DEFINE([UNIX],[1],[Unix tag on]) + AC_DEFINE([DEBUG],[1],[Debug tag on]) + +-AM_INIT_AUTOMAKE + AC_CANONICAL_HOST + + AC_PROG_CC([gcc]) |