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authorYuri Victorovich <yuri@FreeBSD.org>2024-04-06 01:03:07 +0000
committerYuri Victorovich <yuri@FreeBSD.org>2024-04-06 01:04:46 +0000
commit74f10ca31e56a14e62fd5b4d5d8ca335030d5fdd (patch)
tree477f084a9b9299601632649b0496cd43ead835ee /biology
parent010e2cab84f9377139a20e8fa4d5e19aac45593c (diff)
downloadports-74f10ca31e56a14e62fd5b4d5d8ca335030d5fdd.tar.gz
ports-74f10ca31e56a14e62fd5b4d5d8ca335030d5fdd.zip
biology/py-scikit-bio: update 0.5.9 → 0.6.0
Reported by: portscout
Diffstat (limited to 'biology')
-rw-r--r--biology/py-scikit-bio/Makefile7
-rw-r--r--biology/py-scikit-bio/distinfo6
2 files changed, 7 insertions, 6 deletions
diff --git a/biology/py-scikit-bio/Makefile b/biology/py-scikit-bio/Makefile
index 84fad483a3f0..03e22bd69308 100644
--- a/biology/py-scikit-bio/Makefile
+++ b/biology/py-scikit-bio/Makefile
@@ -1,5 +1,5 @@
PORTNAME= scikit-bio
-DISTVERSION= 0.5.9
+DISTVERSION= 0.6.0
CATEGORIES= biology education python
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -16,17 +16,18 @@ BROKEN_aarch64= fails to build: invalid conversion between vector type '__m64' (
BUILD_DEPENDS= ${PYNUMPY} \
${PY_SETUPTOOLS} \
${PYTHON_PKGNAMEPREFIX}wheel>0:devel/py-wheel@${PY_FLAVOR}
-RUN_DEPENDS= ${PYNUMPY} \
+RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}biom-format>0:biology/py-biom-format@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}decorator>=3.4.2:devel/py-decorator@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}h5py>=3.6.0:science/py-h5py@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}hdmedians>=0.14.1:math/py-hdmedians@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}ipython>=3.2.0:devel/ipython@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}matplotlib>=1.4.3:math/py-matplotlib@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}natsort>=4.0.3:devel/py-natsort@${PY_FLAVOR} \
+ ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}pandas>=1.5.0:math/py-pandas@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}requests>=2.20.0:www/py-requests@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}scikit-learn>=0.19.1:science/py-scikit-learn@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}scipy>=1.9.0:science/py-scipy@${PY_FLAVOR}
USES= python
USE_PYTHON= pep517 cython autoplist pytest # tests fail to run, see https://github.com/biocore/scikit-bio/issues/1846
diff --git a/biology/py-scikit-bio/distinfo b/biology/py-scikit-bio/distinfo
index d65c97d3f9c3..558a18b5c5f1 100644
--- a/biology/py-scikit-bio/distinfo
+++ b/biology/py-scikit-bio/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1691038332
-SHA256 (scikit-bio-0.5.9.tar.gz) = 7ae044dc8bee231900248adc3a8659077e76140d56ac9f42bd01fb7981014910
-SIZE (scikit-bio-0.5.9.tar.gz) = 3542513
+TIMESTAMP = 1712349674
+SHA256 (scikit-bio-0.6.0.tar.gz) = 10105a7c3c15ae5910244927f29ba7aa35234b19ebe6513b8484547343b2c10f
+SIZE (scikit-bio-0.6.0.tar.gz) = 1739407