diff options
author | Mark Linimon <linimon@FreeBSD.org> | 2017-05-13 03:35:51 +0000 |
---|---|---|
committer | Mark Linimon <linimon@FreeBSD.org> | 2017-05-13 03:35:51 +0000 |
commit | ba601f25ac232b149cd091af813e9eab852a447b (patch) | |
tree | 0e89021fd44a8edda1d97d4e3b9b90599d254d40 /biology | |
parent | 65cfb4ff6eb45936d6d0f8abedf0a4b25781a555 (diff) |
Notes
Diffstat (limited to 'biology')
-rw-r--r-- | biology/avida/Makefile | 2 | ||||
-rw-r--r-- | biology/bwa/Makefile | 1 | ||||
-rw-r--r-- | biology/gmap/Makefile | 2 | ||||
-rw-r--r-- | biology/iolib/Makefile | 2 | ||||
-rw-r--r-- | biology/plinkseq/Makefile | 2 |
5 files changed, 6 insertions, 3 deletions
diff --git a/biology/avida/Makefile b/biology/avida/Makefile index be08e312e5de..550715afe2a0 100644 --- a/biology/avida/Makefile +++ b/biology/avida/Makefile @@ -17,7 +17,7 @@ BROKEN_armv6= invokes x86 asm BROKEN_mips= invokes x86 asm BROKEN_mips64= invokes x86 asm BROKEN_sparc64= missing atomics implementation -BROKEN_powerpc64= Does not build on powerpc64 +BROKEN_powerpc64= fails to compile: sibling call optimization does not allow automatic multiple TOCs USES= cmake:outsource ncurses CMAKE_ARGS= -DAPTO_UNIT_TESTS:BOOL=OFF \ diff --git a/biology/bwa/Makefile b/biology/bwa/Makefile index a20f1209ac52..163cc1ce9e03 100644 --- a/biology/bwa/Makefile +++ b/biology/bwa/Makefile @@ -12,6 +12,7 @@ COMMENT= Burrows-Wheeler sequence aligner LICENSE= GPLv3 BROKEN_aarch64= fails to compile: error: invalid conversion between vector type and integer type +BROKEN_powerpc64= fails to compile: ksw.c: error: emmintrin.h: No such file or directory USES= perl5 shebangfix tar:bzip2 SHEBANG_FILES= qualfa2fq.pl xa2multi.pl diff --git a/biology/gmap/Makefile b/biology/gmap/Makefile index af0f1e6e6eba..070ce4c38210 100644 --- a/biology/gmap/Makefile +++ b/biology/gmap/Makefile @@ -27,7 +27,7 @@ SIMD_CONFIGURE_OFF= --disable-builtin-popcount --disable-simd BROKEN_aarch64= Does not build: invokes x86 asm BROKEN_armv6= Does not build: invokes x86 asm BROKEN_mips64= Does not build: invokes x86 asm -BROKEN_powerpc64= Does not build on powerpc64 +BROKEN_powerpc64= Does not build: invokes x86 asm BROKEN_sparc64= Does not build: invokes x86 asm # shebang_fix operates during patch. diff --git a/biology/iolib/Makefile b/biology/iolib/Makefile index 5c5eb97ab207..388c3b365862 100644 --- a/biology/iolib/Makefile +++ b/biology/iolib/Makefile @@ -13,6 +13,8 @@ LICENSE= BSD3CLAUSE LIB_DEPENDS= libcurl.so:ftp/curl +BROKEN_powerpc64= fails to compile: bgzip.c: error: invalid operands to binary & + USE_GITHUB= yes GH_ACCOUNT= jkbonfield diff --git a/biology/plinkseq/Makefile b/biology/plinkseq/Makefile index 05a8a59792ce..68ca7236bd59 100644 --- a/biology/plinkseq/Makefile +++ b/biology/plinkseq/Makefile @@ -16,7 +16,7 @@ LICENSE= GPLv2 BROKEN_aarch64= Does not build: Host architecture was not detected as supported by protobuf BROKEN_mips64= Does not build: Host architecture was not detected as supported by protobuf -BROKEN_powerpc64= Does not build +BROKEN_powerpc64= Does not build: atomicops.h: error: stray '\#' in program USES= libtool gmake |