diff options
| author | Sunpoet Po-Chuan Hsieh <sunpoet@FreeBSD.org> | 2020-07-24 07:08:11 +0000 |
|---|---|---|
| committer | Sunpoet Po-Chuan Hsieh <sunpoet@FreeBSD.org> | 2020-07-24 07:08:11 +0000 |
| commit | c0f387431ad322b6b001de8539d03dd91c257dce (patch) | |
| tree | 117739f8f418f0e3747d262e007735e7bdc95b3d /biology | |
| parent | 8ed0c4eaebb973269936529ba54cbffae7db9313 (diff) | |
Notes
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/Makefile | 1 | ||||
| -rw-r--r-- | biology/rubygem-bio-shell/Makefile | 26 | ||||
| -rw-r--r-- | biology/rubygem-bio-shell/distinfo | 3 | ||||
| -rw-r--r-- | biology/rubygem-bio-shell/pkg-descr | 8 |
4 files changed, 38 insertions, 0 deletions
diff --git a/biology/Makefile b/biology/Makefile index 51d38daecc7f..12546e838c16 100644 --- a/biology/Makefile +++ b/biology/Makefile @@ -150,6 +150,7 @@ SUBDIR += rubygem-bio SUBDIR += rubygem-bio-executables SUBDIR += rubygem-bio-old-biofetch-emulator + SUBDIR += rubygem-bio-shell SUBDIR += samtools SUBDIR += scrm SUBDIR += seaview diff --git a/biology/rubygem-bio-shell/Makefile b/biology/rubygem-bio-shell/Makefile new file mode 100644 index 000000000000..ab2b01b3eb1a --- /dev/null +++ b/biology/rubygem-bio-shell/Makefile @@ -0,0 +1,26 @@ +# Created by: Po-Chuan Hsieh <sunpoet@FreeBSD.org> +# $FreeBSD$ + +PORTNAME= bio-shell +PORTVERSION= 1.0.0 +CATEGORIES= biology rubygems +MASTER_SITES= RG + +MAINTAINER= sunpoet@FreeBSD.org +COMMENT= Command-line interface on BioRuby + +LICENSE= BSD2CLAUSE RUBY +LICENSE_COMB= dual +LICENSE_FILE_BSD2CLAUSE=${WRKSRC}/BSDL +LICENSE_FILE_RUBY= ${WRKSRC}/COPYING + +RUN_DEPENDS= rubygem-bio>=2.0.0:biology/rubygem-bio + +USES= gem +USE_RUBY= yes + +NO_ARCH= yes + +PLIST_FILES= bin/bioruby + +.include <bsd.port.mk> diff --git a/biology/rubygem-bio-shell/distinfo b/biology/rubygem-bio-shell/distinfo new file mode 100644 index 000000000000..5f8a5cec4504 --- /dev/null +++ b/biology/rubygem-bio-shell/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1595416511 +SHA256 (rubygem/bio-shell-1.0.0.gem) = 5a41c4226c12de49476bda8e59dd17ac3340b15cebc2f241842334d9de822528 +SIZE (rubygem/bio-shell-1.0.0.gem) = 46592 diff --git a/biology/rubygem-bio-shell/pkg-descr b/biology/rubygem-bio-shell/pkg-descr new file mode 100644 index 000000000000..29237e3aa454 --- /dev/null +++ b/biology/rubygem-bio-shell/pkg-descr @@ -0,0 +1,8 @@ +bio-shell, providing BioRuby Shell, is a command-line interface for BioRuby, an +open source bioinformatics library for Ruby. + +This code has historically been part of the BioRuby gem, but has been split into +its own gem as part of an effort to modularize BioRuby. bio-shell and many more +plugins are available at biogems.info. + +WWW: https://github.com/bioruby/bioruby-shell |